RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 ZNF784Q8NCA9 323 aaPredicted RBP21.52■■□□□ 1.04
SCAMP2-210ENST00000569124 LRRC4BQ9NT99 713 aa21.52■■□□□ 1.04
SCAMP2-210ENST00000569124 ITGB4P16144 1822 aa21.52■■□□□ 1.04
SCAMP2-210ENST00000569124 ANKRD36BQ8N2N9 1353 aa21.51■■□□□ 1.03
SCAMP2-210ENST00000569124 COG3Q96JB2 828 aa21.51■■□□□ 1.03
SCAMP2-210ENST00000569124 MEGF6O75095 1541 aa21.5■■□□□ 1.03
SCAMP2-210ENST00000569124 MAP3K19Q56UN5 1328 aa21.5■■□□□ 1.03
SCAMP2-210ENST00000569124 RTL1A6NKG5 1358 aa21.49■■□□□ 1.03
SCAMP2-210ENST00000569124 AKT1S1Q96B36 256 aa21.49■■□□□ 1.03
SCAMP2-210ENST00000569124 SYTL4Q96C24 671 aaPredicted RBP21.49■■□□□ 1.03
SCAMP2-210ENST00000569124 POLD1P28340 1107 aa21.48■■□□□ 1.03
SCAMP2-210ENST00000569124 HOXC9P31274 260 aa21.48■■□□□ 1.03
SCAMP2-210ENST00000569124 AMPHP49418 695 aa21.48■■□□□ 1.03
SCAMP2-210ENST00000569124 SLC16A10Q8TF71 515 aa21.48■■□□□ 1.03
SCAMP2-210ENST00000569124 KLHL34Q8N239 644 aa21.47■■□□□ 1.03
SCAMP2-210ENST00000569124 PNPLA7Q6ZV29 1317 aa21.47■■□□□ 1.03
SCAMP2-210ENST00000569124 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
SCAMP2-210ENST00000569124 NSD2O96028 1365 aa21.46■■□□□ 1.03
SCAMP2-210ENST00000569124 SLC24A1O60721 1099 aa21.45■■□□□ 1.02
SCAMP2-210ENST00000569124 TESK2Q96S53 571 aa21.45■■□□□ 1.02
SCAMP2-210ENST00000569124 TFCP2L1Q9NZI6 479 aa21.45■■□□□ 1.02
SCAMP2-210ENST00000569124 PKD1L3Q7Z443 1732 aa21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 TOGARAM1Q9Y4F4 1720 aa21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 ST20-MTHFSA0A0A6YYL1 179 aa21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 PRIM1P49642 420 aaKnown RBP21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 GPR162Q16538 588 aa21.44■■□□□ 1.02
SCAMP2-210ENST00000569124 ZCRB1Q8TBF4 217 aaKnown RBP21.43■■□□□ 1.02
SCAMP2-210ENST00000569124 MAP2P11137 1827 aaKnown RBP21.42■■□□□ 1.02
SCAMP2-210ENST00000569124 ANKRD26Q9UPS8 1709 aa21.42■■□□□ 1.02
SCAMP2-210ENST00000569124 KCNQ4P56696 695 aa21.41■■□□□ 1.02
SCAMP2-210ENST00000569124 CCNL1Q9UK58 526 aaPredicted RBP21.41■■□□□ 1.02
SCAMP2-210ENST00000569124 UBR3Q6ZT12 1888 aa21.41■■□□□ 1.02
SCAMP2-210ENST00000569124 CGNL1Q0VF96 1302 aa21.4■■□□□ 1.02
SCAMP2-210ENST00000569124 FBLN1P23142 703 aa21.4■■□□□ 1.02
SCAMP2-210ENST00000569124 PELP1Q8IZL8 1130 aaKnown RBP21.39■■□□□ 1.01
SCAMP2-210ENST00000569124 C4BP0C0L5 1744 aa21.38■■□□□ 1.01
SCAMP2-210ENST00000569124 RRS1Q15050 365 aaKnown RBP21.38■■□□□ 1.01
SCAMP2-210ENST00000569124 RAPGEF4Q8WZA2 1011 aa21.38■■□□□ 1.01
SCAMP2-210ENST00000569124 GOLGB1Q14789 3259 aaKnown RBP21.37■■□□□ 1.01
SCAMP2-210ENST00000569124 MSH5O43196 834 aa21.36■■□□□ 1.01
SCAMP2-210ENST00000569124 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
SCAMP2-210ENST00000569124 GGNBP2Q9H3C7 697 aa21.36■■□□□ 1.01
SCAMP2-210ENST00000569124 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 TATP17735 454 aaPredicted RBP21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 TMF1P82094 1093 aa21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 NBPF6Q5VWK0 638 aa21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 NBPF4Q96M43 638 aa21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 FLT4P35916 1363 aa21.35■■□□□ 1.01
SCAMP2-210ENST00000569124 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
SCAMP2-210ENST00000569124 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
SCAMP2-210ENST00000569124 C1QTNF8P60827 252 aa21.34■■□□□ 1.01
SCAMP2-210ENST00000569124 NLGN2Q8NFZ4 835 aa21.34■■□□□ 1.01
SCAMP2-210ENST00000569124 INSRP06213 1382 aa21.34■■□□□ 1.01
SCAMP2-210ENST00000569124 FYB1O15117 783 aa21.33■■□□□ 1.01
SCAMP2-210ENST00000569124 KIF24Q5T7B8 1368 aa21.33■■□□□ 1
SCAMP2-210ENST00000569124 PALLDQ8WX93 1383 aa21.31■■□□□ 1
SCAMP2-210ENST00000569124 HMGB2P26583 209 aaKnown RBP21.3■■□□□ 1
SCAMP2-210ENST00000569124 CDCA8Q53HL2 280 aa21.3■■□□□ 1
SCAMP2-210ENST00000569124 COL23A1Q86Y22 540 aaPredicted RBP21.3■■□□□ 1
SCAMP2-210ENST00000569124 GIGYF1O75420 1035 aaPredicted RBP21.29■■□□□ 1
SCAMP2-210ENST00000569124 HSP90AB2PQ58FF8 381 aa21.28■■□□□ 1
SCAMP2-210ENST00000569124 MSL1Q68DK7 614 aa21.28■■□□□ 1
SCAMP2-210ENST00000569124 ZNF316A6NFI3 1004 aaPredicted RBP21.27■■□□□ 1
SCAMP2-210ENST00000569124 GRIN3BO60391 1043 aa21.27■■□□□ 1
SCAMP2-210ENST00000569124 FLAD1Q8NFF5 587 aa21.26■□□□□ 0.99
SCAMP2-210ENST00000569124 NSD3Q9BZ95 1437 aa21.26■□□□□ 0.99
SCAMP2-210ENST00000569124 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.993e-7■□□□□ 9.4
SCAMP2-210ENST00000569124 MPRIPQ6WCQ1 1025 aa21.25■□□□□ 0.99
SCAMP2-210ENST00000569124 NCAPD2Q15021 1401 aa21.24■□□□□ 0.99
SCAMP2-210ENST00000569124 POLR3GLQ9BT43 218 aa21.24■□□□□ 0.99
SCAMP2-210ENST00000569124 CYP27B1O15528 508 aa21.23■□□□□ 0.99
SCAMP2-210ENST00000569124 SMARCC1Q92922 1105 aaPredicted RBP21.23■□□□□ 0.99
SCAMP2-210ENST00000569124 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
SCAMP2-210ENST00000569124 AK7Q96M32 723 aa21.22■□□□□ 0.99
SCAMP2-210ENST00000569124 CD2APQ9Y5K6 639 aa21.21■□□□□ 0.99
SCAMP2-210ENST00000569124 EMILIN1Q9Y6C2 1016 aa21.21■□□□□ 0.99
SCAMP2-210ENST00000569124 COL5A3P25940 1745 aaPredicted RBP21.2■□□□□ 0.98
SCAMP2-210ENST00000569124 ZNF831Q5JPB2 1677 aa21.19■□□□□ 0.98
SCAMP2-210ENST00000569124 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
SCAMP2-210ENST00000569124 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
SCAMP2-210ENST00000569124 N4BP2Q86UW6 1770 aaPredicted RBP21.18■□□□□ 0.98
SCAMP2-210ENST00000569124 PPM1GO15355 546 aaPredicted RBP21.18■□□□□ 0.98
SCAMP2-210ENST00000569124 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
SCAMP2-210ENST00000569124 VIRMAQ69YN4 1812 aaKnown RBP21.18■□□□□ 0.98
SCAMP2-210ENST00000569124 PHF14O94880 888 aa21.17■□□□□ 0.98
SCAMP2-210ENST00000569124 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
SCAMP2-210ENST00000569124 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
SCAMP2-210ENST00000569124 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
SCAMP2-210ENST00000569124 C4AP0C0L4 1744 aa21.15■□□□□ 0.98
SCAMP2-210ENST00000569124 PIGBQ92521 554 aa21.15■□□□□ 0.98
SCAMP2-210ENST00000569124 BRCA1P38398 1863 aaKnown RBP21.15■□□□□ 0.98
SCAMP2-210ENST00000569124 NKX1-1Q15270 411 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-210ENST00000569124 CICQ96RK0 1608 aaPredicted RBP21.14■□□□□ 0.97
SCAMP2-210ENST00000569124 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.13■□□□□ 0.97
SCAMP2-210ENST00000569124 SSFA2P28290 1259 aa21.13■□□□□ 0.97
SCAMP2-210ENST00000569124 TMOD3Q9NYL9 352 aa21.13■□□□□ 0.97
SCAMP2-210ENST00000569124 ADCY9O60503 1353 aa21.12■□□□□ 0.97
SCAMP2-210ENST00000569124 IGSF1Q8N6C5 1336 aa21.12■□□□□ 0.97
SCAMP2-210ENST00000569124 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms