RNA–Protein interactions for RNA: ENST00000569093.1

CCNF-205, Transcript of cyclin F, humanhuman

TSL 2

Gene CCNF, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-205ENST00000569093 RGPD3A6NKT7 1758 aaPredicted RBP34.72■■■■□ 3.15
CCNF-205ENST00000569093 RGPD4Q7Z3J3 1758 aa34.72■■■■□ 3.15
CCNF-205ENST00000569093 WASHC2AQ641Q2 1341 aa34.72■■■■□ 3.15
CCNF-205ENST00000569093 NBPF14Q5TI25 921 aa34.71■■■■□ 3.15
CCNF-205ENST00000569093 SHANK3Q9BYB0 1731 aa34.7■■■■□ 3.15
CCNF-205ENST00000569093 RAPGEF4Q8WZA2 1011 aa34.7■■■■□ 3.15
CCNF-205ENST00000569093 KNSTRNQ9Y448 316 aa34.69■■■■□ 3.14
CCNF-205ENST00000569093 TATP17735 454 aaPredicted RBP34.67■■■■□ 3.14
CCNF-205ENST00000569093 NSD2O96028 1365 aa34.66■■■■□ 3.14
CCNF-205ENST00000569093 MORC1Q86VD1 984 aa34.66■■■■□ 3.14
CCNF-205ENST00000569093 TXNRD1Q16881 649 aa34.65■■■■□ 3.14
CCNF-205ENST00000569093 BTAF1O14981 1849 aa34.64■■■■□ 3.14
CCNF-205ENST00000569093 EYA1Q99502 592 aa34.63■■■■□ 3.13
CCNF-205ENST00000569093 ANO8Q9HCE9 1232 aaPredicted RBP34.61■■■■□ 3.13
CCNF-205ENST00000569093 PRIM1P49642 420 aaKnown RBP34.6■■■■□ 3.13
CCNF-205ENST00000569093 EIF4A2Q14240 407 aaKnown RBP34.6■■■■□ 3.13
CCNF-205ENST00000569093 AMER1Q5JTC6 1135 aaPredicted RBP34.6■■■■□ 3.13
CCNF-205ENST00000569093 SYTL4Q96C24 671 aaPredicted RBP34.59■■■■□ 3.13
CCNF-205ENST00000569093 LRP5O75197 1615 aa34.58■■■■□ 3.13
CCNF-205ENST00000569093 DOT1LQ8TEK3 1739 aa34.58■■■■□ 3.13
CCNF-205ENST00000569093 NCAPD2Q15021 1401 aa34.57■■■■□ 3.13
CCNF-205ENST00000569093 PER1O15534 1290 aaPredicted RBP34.57■■■■□ 3.12
CCNF-205ENST00000569093 PCDH11XQ9BZA7 1347 aa34.53■■■■□ 3.12
CCNF-205ENST00000569093 PCDH11YQ9BZA8 1340 aa34.53■■■■□ 3.12
CCNF-205ENST00000569093 CYP27B1O15528 508 aa34.52■■■■□ 3.12
CCNF-205ENST00000569093 PKD1L3Q7Z443 1732 aa34.5■■■■□ 3.11
CCNF-205ENST00000569093 CC2D1BQ5T0F9 858 aaKnown RBP34.48■■■■□ 3.11
CCNF-205ENST00000569093 LRRC4BQ9NT99 713 aa34.48■■■■□ 3.11
CCNF-205ENST00000569093 PDGFDQ9GZP0 370 aaPredicted RBP34.47■■■■□ 3.11
CCNF-205ENST00000569093 STK32BQ9NY57 414 aa34.47■■■■□ 3.11
CCNF-205ENST00000569093 SPG7Q9UQ90 795 aa34.46■■■■□ 3.11
CCNF-205ENST00000569093 SLC15A2Q16348 729 aa34.45■■■■□ 3.11
CCNF-205ENST00000569093 IGSF1Q8N6C5 1336 aa34.45■■■■□ 3.11
CCNF-205ENST00000569093 CNGB1Q14028 1251 aaPredicted RBP34.44■■■■□ 3.1
CCNF-205ENST00000569093 KCNQ4P56696 695 aa34.43■■■■□ 3.1
CCNF-205ENST00000569093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.41■■■■□ 3.1
CCNF-205ENST00000569093 PAPPAQ13219 1627 aa34.4■■■■□ 3.1
CCNF-205ENST00000569093 CASZ1Q86V15 1759 aa34.39■■■■□ 3.1
CCNF-205ENST00000569093 TOGARAM1Q9Y4F4 1720 aa34.39■■■■□ 3.1
CCNF-205ENST00000569093 MTHFSP49914 203 aa34.39■■■■□ 3.1
CCNF-205ENST00000569093 MPRIPQ6WCQ1 1025 aa34.39■■■■□ 3.1
CCNF-205ENST00000569093 NKX1-1Q15270 411 aaPredicted RBP34.38■■■■□ 3.09
CCNF-205ENST00000569093 SLC27A3Q5K4L6 730 aa34.38■■■■□ 3.09
CCNF-205ENST00000569093 LY75O60449 1722 aa34.38■■■■□ 3.09
CCNF-205ENST00000569093 ZNF827Q17R98 1081 aa34.37■■■■□ 3.09
CCNF-205ENST00000569093 AEBP1Q8IUX7 1158 aa34.37■■■■□ 3.09
CCNF-205ENST00000569093 SPON1Q9HCB6 807 aa34.37■■■■□ 3.09
CCNF-205ENST00000569093 IL13P35225 146 aa34.36■■■■□ 3.09
CCNF-205ENST00000569093 ITGB4P16144 1822 aa34.36■■■■□ 3.09
CCNF-205ENST00000569093 PHKG2P15735 406 aa34.35■■■■□ 3.09
CCNF-205ENST00000569093 IFNL2Q8IZJ0 200 aa34.34■■■■□ 3.09
CCNF-205ENST00000569093 ZBTB7AO95365 584 aa34.33■■■■□ 3.09
CCNF-205ENST00000569093 NPC1L1Q9UHC9 1359 aa34.33■■■■□ 3.09
CCNF-205ENST00000569093 SULT6B1Q6IMI4 303 aa34.31■■■■□ 3.08
CCNF-205ENST00000569093 AKT1S1Q96B36 256 aa34.31■■■■□ 3.08
CCNF-205ENST00000569093 CCNL1Q9UK58 526 aaPredicted RBP34.31■■■■□ 3.08
CCNF-205ENST00000569093 PIGBQ92521 554 aa34.3■■■■□ 3.08
CCNF-205ENST00000569093 PLEKHO1Q53GL0 409 aaPredicted RBP34.29■■■■□ 3.08
CCNF-205ENST00000569093 ATF5Q9Y2D1 282 aaPredicted RBP34.29■■■■□ 3.08
CCNF-205ENST00000569093 PLEKHG2Q9H7P9 1386 aa34.26■■■■□ 3.08
CCNF-205ENST00000569093 PALLDQ8WX93 1383 aa34.25■■■■□ 3.07
CCNF-205ENST00000569093 ZNF530Q6P9A1 599 aaPredicted RBP34.24■■■■□ 3.07
CCNF-205ENST00000569093 PPP1R1BQ9UD71 204 aaPredicted RBP34.24■■■■□ 3.07
CCNF-205ENST00000569093 KDRP35968 1356 aa34.23■■■■□ 3.07
CCNF-205ENST00000569093 AMOTQ4VCS5 1084 aa34.23■■■■□ 3.07
CCNF-205ENST00000569093 TMOD3Q9NYL9 352 aa34.23■■■■□ 3.07
CCNF-205ENST00000569093 DIAPH1O60610 1272 aaKnown RBP34.21■■■■□ 3.07
CCNF-205ENST00000569093 HMOX1P09601 288 aa34.21■■■■□ 3.07
CCNF-205ENST00000569093 SMARCC1Q92922 1105 aaPredicted RBP34.21■■■■□ 3.07
CCNF-205ENST00000569093 TFCP2L1Q9NZI6 479 aa34.21■■■■□ 3.07
CCNF-205ENST00000569093 PTGER2P43116 358 aa34.2■■■■□ 3.07
CCNF-205ENST00000569093 TUBGCP6Q96RT7 1819 aa34.2■■■■□ 3.07
CCNF-205ENST00000569093 MTFR1LQ9H019 292 aa34.19■■■■□ 3.06
CCNF-205ENST00000569093 PNPLA7Q6ZV29 1317 aa34.19■■■■□ 3.06
CCNF-205ENST00000569093 ASAP1Q9ULH1 1129 aa34.18■■■■□ 3.06
CCNF-205ENST00000569093 QSER1Q2KHR3 1735 aa34.17■■■■□ 3.06
CCNF-205ENST00000569093 DCAF5Q96JK2 942 aa34.17■■■■□ 3.06
CCNF-205ENST00000569093 HSP90AB1P08238 724 aaKnown RBP34.16■■■■□ 3.06
CCNF-205ENST00000569093 C5P01031 1676 aa34.15■■■■□ 3.06
CCNF-205ENST00000569093 TAF1LQ8IZX4 1826 aa34.15■■■■□ 3.06
CCNF-205ENST00000569093 COL3A1P02461 1466 aaPredicted RBP34.14■■■■□ 3.06
CCNF-205ENST00000569093 KDM6AO15550 1401 aaPredicted RBP34.14■■■■□ 3.06
CCNF-205ENST00000569093 ERVV-2B6SEH9 535 aa34.14■■■■□ 3.06
CCNF-205ENST00000569093 C1orf141Q5JVX7 400 aa34.14■■■■□ 3.06
CCNF-205ENST00000569093 ATG3Q9NT62 314 aa34.14■■■■□ 3.06
CCNF-205ENST00000569093 SGIP1Q9BQI5 828 aa34.13■■■■□ 3.05
CCNF-205ENST00000569093 LOC102724428A0A0B4J2F2 783 aa34.1■■■■□ 3.05
CCNF-205ENST00000569093 SIK1P57059 783 aa34.1■■■■□ 3.05
CCNF-205ENST00000569093 U2SURPO15042 1029 aaKnown RBP34.09■■■■□ 3.05
CCNF-205ENST00000569093 CABP4P57796 275 aa34.09■■■■□ 3.05
CCNF-205ENST00000569093 COL23A1Q86Y22 540 aaPredicted RBP34.09■■■■□ 3.05
CCNF-205ENST00000569093 SLC16A10Q8TF71 515 aa34.08■■■■□ 3.05
CCNF-205ENST00000569093 PPP2R1AP30153 589 aa34.07■■■■□ 3.04
CCNF-205ENST00000569093 MSH5O43196 834 aa34.06■■■■□ 3.04
CCNF-205ENST00000569093 C4BP0C0L5 1744 aa34.06■■■■□ 3.04
CCNF-205ENST00000569093 ITPK1Q13572 414 aa34.05■■■■□ 3.04
CCNF-205ENST00000569093 ATP6V1AP38606 617 aa34.04■■■■□ 3.04
CCNF-205ENST00000569093 MTHFSDQ2M296 383 aaKnown RBP34.04■■■■□ 3.04
CCNF-205ENST00000569093 AKAP4Q5JQC9 854 aa34.04■■■■□ 3.04
CCNF-205ENST00000569093 NFATC2IPQ8NCF5 419 aa34.04■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms