RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 ZCRB1Q8TBF4 217 aaKnown RBP19.05■□□□□ 0.64
CNOT1-215ENST00000569020 SYTL4Q96C24 671 aaPredicted RBP19.05■□□□□ 0.64
CNOT1-215ENST00000569020 LY75O60449 1722 aa19.04■□□□□ 0.64
CNOT1-215ENST00000569020 SLC27A3Q5K4L6 730 aa19.04■□□□□ 0.64
CNOT1-215ENST00000569020 MEGF6O75095 1541 aa19.04■□□□□ 0.64
CNOT1-215ENST00000569020 LRRC4BQ9NT99 713 aa19.03■□□□□ 0.64
CNOT1-215ENST00000569020 TIMELESSQ9UNS1 1208 aa19.03■□□□□ 0.64
CNOT1-215ENST00000569020 NBPF6Q5VWK0 638 aa19.02■□□□□ 0.64
CNOT1-215ENST00000569020 NBPF4Q96M43 638 aa19.02■□□□□ 0.64
CNOT1-215ENST00000569020 CGNL1Q0VF96 1302 aa19.01■□□□□ 0.63
CNOT1-215ENST00000569020 PRIM1P49642 420 aaKnown RBP19.01■□□□□ 0.63
CNOT1-215ENST00000569020 ZNF827Q17R98 1081 aa19.01■□□□□ 0.63
CNOT1-215ENST00000569020 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
CNOT1-215ENST00000569020 TUBGCP6Q96RT7 1819 aa19■□□□□ 0.63
CNOT1-215ENST00000569020 FHDC1Q9C0D6 1143 aaPredicted RBP19■□□□□ 0.63
CNOT1-215ENST00000569020 INSRP06213 1382 aa19■□□□□ 0.63
CNOT1-215ENST00000569020 FLT4P35916 1363 aa19■□□□□ 0.63
CNOT1-215ENST00000569020 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
CNOT1-215ENST00000569020 TATP17735 454 aaPredicted RBP18.99■□□□□ 0.63
CNOT1-215ENST00000569020 USHBP1Q8N6Y0 703 aa18.99■□□□□ 0.63
CNOT1-215ENST00000569020 AKT1S1Q96B36 256 aa18.99■□□□□ 0.63
CNOT1-215ENST00000569020 SGIP1Q9BQI5 828 aa18.99■□□□□ 0.63
CNOT1-215ENST00000569020 SYT17Q9BSW7 474 aa18.99■□□□□ 0.63
CNOT1-215ENST00000569020 HSP90AB2PQ58FF8 381 aa18.98■□□□□ 0.63
CNOT1-215ENST00000569020 ARXQ96QS3 562 aa18.98■□□□□ 0.63
CNOT1-215ENST00000569020 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
CNOT1-215ENST00000569020 MAP2P11137 1827 aaKnown RBP18.97■□□□□ 0.63
CNOT1-215ENST00000569020 NSD2O96028 1365 aa18.97■□□□□ 0.63
CNOT1-215ENST00000569020 SLC16A10Q8TF71 515 aa18.97■□□□□ 0.63
CNOT1-215ENST00000569020 CLSPNQ9HAW4 1339 aa18.97■□□□□ 0.63
CNOT1-215ENST00000569020 CARD14Q9BXL6 1004 aa18.96■□□□□ 0.63
CNOT1-215ENST00000569020 COL24A1Q17RW2 1714 aa18.96■□□□□ 0.63
CNOT1-215ENST00000569020 ANKRD26Q9UPS8 1709 aa18.95■□□□□ 0.62
CNOT1-215ENST00000569020 TFCP2L1Q9NZI6 479 aa18.95■□□□□ 0.62
CNOT1-215ENST00000569020 PCDH11XQ9BZA7 1347 aa18.95■□□□□ 0.62
CNOT1-215ENST00000569020 PCDH11YQ9BZA8 1340 aa18.95■□□□□ 0.62
CNOT1-215ENST00000569020 CHD4Q14839 1912 aa18.94■□□□□ 0.62
CNOT1-215ENST00000569020 KCNQ4P56696 695 aa18.94■□□□□ 0.62
CNOT1-215ENST00000569020 PCGF6Q9BYE7 350 aa18.94■□□□□ 0.62
CNOT1-215ENST00000569020 CCNL1Q9UK58 526 aaPredicted RBP18.94■□□□□ 0.62
CNOT1-215ENST00000569020 PNPLA7Q6ZV29 1317 aa18.94■□□□□ 0.62
CNOT1-215ENST00000569020 ITGB4P16144 1822 aa18.93■□□□□ 0.62
CNOT1-215ENST00000569020 PKD1L3Q7Z443 1732 aa18.93■□□□□ 0.62
CNOT1-215ENST00000569020 C5P01031 1676 aa18.92■□□□□ 0.62
CNOT1-215ENST00000569020 POLD1P28340 1107 aa18.92■□□□□ 0.62
CNOT1-215ENST00000569020 EMILIN1Q9Y6C2 1016 aa18.92■□□□□ 0.62
CNOT1-215ENST00000569020 MAP3K5Q99683 1374 aa18.92■□□□□ 0.62
CNOT1-215ENST00000569020 TAF1LQ8IZX4 1826 aa18.91■□□□□ 0.62
CNOT1-215ENST00000569020 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
CNOT1-215ENST00000569020 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
CNOT1-215ENST00000569020 POLR3GLQ9BT43 218 aa18.89■□□□□ 0.61
CNOT1-215ENST00000569020 TOGARAM1Q9Y4F4 1720 aa18.88■□□□□ 0.61
CNOT1-215ENST00000569020 KLHL34Q8N239 644 aa18.88■□□□□ 0.61
CNOT1-215ENST00000569020 CYP27B1O15528 508 aa18.87■□□□□ 0.61
CNOT1-215ENST00000569020 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
CNOT1-215ENST00000569020 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
CNOT1-215ENST00000569020 NCAPD2Q15021 1401 aa18.86■□□□□ 0.61
CNOT1-215ENST00000569020 SPG7Q9UQ90 795 aa18.86■□□□□ 0.61
CNOT1-215ENST00000569020 PALLDQ8WX93 1383 aa18.85■□□□□ 0.61
CNOT1-215ENST00000569020 GPR162Q16538 588 aa18.84■□□□□ 0.61
CNOT1-215ENST00000569020 SMARCC1Q92922 1105 aaPredicted RBP18.84■□□□□ 0.61
CNOT1-215ENST00000569020 EIF4G2P78344 907 aaKnown RBP eCLIP18.83■□□□□ 0.6
CNOT1-215ENST00000569020 COL23A1Q86Y22 540 aaPredicted RBP18.83■□□□□ 0.6
CNOT1-215ENST00000569020 EYA1Q99502 592 aa18.83■□□□□ 0.6
CNOT1-215ENST00000569020 POLKQ9UBT6 870 aa18.83■□□□□ 0.6
CNOT1-215ENST00000569020 C4BP0C0L5 1744 aa18.83■□□□□ 0.6
CNOT1-215ENST00000569020 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
CNOT1-215ENST00000569020 NKX1-1Q15270 411 aaPredicted RBP18.81■□□□□ 0.6
CNOT1-215ENST00000569020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.81■□□□□ 0.61e-13■■■□□ 16.8
CNOT1-215ENST00000569020 TNNT2P45379 298 aaPredicted RBP18.8■□□□□ 0.6
CNOT1-215ENST00000569020 ZNF784Q8NCA9 323 aaPredicted RBP18.8■□□□□ 0.6
CNOT1-215ENST00000569020 UBR3Q6ZT12 1888 aa18.8■□□□□ 0.6
CNOT1-215ENST00000569020 HSPA5P11021 654 aaKnown RBP18.79■□□□□ 0.6
CNOT1-215ENST00000569020 PELP1Q8IZL8 1130 aaKnown RBP18.79■□□□□ 0.6
CNOT1-215ENST00000569020 PIGBQ92521 554 aa18.79■□□□□ 0.6
CNOT1-215ENST00000569020 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
CNOT1-215ENST00000569020 AK7Q96M32 723 aa18.78■□□□□ 0.6
CNOT1-215ENST00000569020 EIF4A2Q14240 407 aaKnown RBP18.77■□□□□ 0.6
CNOT1-215ENST00000569020 MSL1Q68DK7 614 aa18.77■□□□□ 0.6
CNOT1-215ENST00000569020 NLGN2Q8NFZ4 835 aa18.77■□□□□ 0.6
CNOT1-215ENST00000569020 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
CNOT1-215ENST00000569020 PANK3Q9H999 370 aa18.77■□□□□ 0.6
CNOT1-215ENST00000569020 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
CNOT1-215ENST00000569020 PHKG2P15735 406 aa18.76■□□□□ 0.59
CNOT1-215ENST00000569020 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
CNOT1-215ENST00000569020 LOC102724428A0A0B4J2F2 783 aa18.74■□□□□ 0.59
CNOT1-215ENST00000569020 SIK1P57059 783 aa18.74■□□□□ 0.59
CNOT1-215ENST00000569020 IGSF1Q8N6C5 1336 aa18.74■□□□□ 0.59
CNOT1-215ENST00000569020 PHF14O94880 888 aa18.72■□□□□ 0.59
CNOT1-215ENST00000569020 GRIN3BO60391 1043 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 SSFA2P28290 1259 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 ATP6V1AP38606 617 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 ASAP1Q9ULH1 1129 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 CD2APQ9Y5K6 639 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 UTRNP46939 3433 aa18.71■□□□□ 0.59
CNOT1-215ENST00000569020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
CNOT1-215ENST00000569020 HSP90AB1P08238 724 aaKnown RBP18.7■□□□□ 0.58
CNOT1-215ENST00000569020 MORC1Q86VD1 984 aa18.7■□□□□ 0.58
CNOT1-215ENST00000569020 LINC00116Q8NCU8 138 aa18.7■□□□□ 0.58
CNOT1-215ENST00000569020 PLEKHO1Q53GL0 409 aaPredicted RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms