RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 NUP188Q5SRE5 1749 aa24.01■■□□□ 1.43
EDC3-215ENST00000569007 MORC1Q86VD1 984 aa24.01■■□□□ 1.43
EDC3-215ENST00000569007 NHSQ6T4R5 1651 aa24.01■■□□□ 1.43
EDC3-215ENST00000569007 RGPD3A6NKT7 1758 aaPredicted RBP24■■□□□ 1.43
EDC3-215ENST00000569007 RGPD4Q7Z3J3 1758 aa24■■□□□ 1.43
EDC3-215ENST00000569007 TATP17735 454 aaPredicted RBP23.99■■□□□ 1.43
EDC3-215ENST00000569007 AMER1Q5JTC6 1135 aaPredicted RBP23.99■■□□□ 1.43
EDC3-215ENST00000569007 NBPF14Q5TI25 921 aa23.98■■□□□ 1.43
EDC3-215ENST00000569007 PROM2Q8N271 834 aa23.97■■□□□ 1.43
EDC3-215ENST00000569007 SHANK3Q9BYB0 1731 aa23.97■■□□□ 1.43
EDC3-215ENST00000569007 NCAPD2Q15021 1401 aa23.96■■□□□ 1.43
EDC3-215ENST00000569007 EYA1Q99502 592 aa23.96■■□□□ 1.43
EDC3-215ENST00000569007 KAT6BQ8WYB5 2073 aa23.96■■□□□ 1.43
EDC3-215ENST00000569007 EIF4A2Q14240 407 aaKnown RBP23.95■■□□□ 1.42
EDC3-215ENST00000569007 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
EDC3-215ENST00000569007 TXNRD1Q16881 649 aa23.93■■□□□ 1.42
EDC3-215ENST00000569007 BTAF1O14981 1849 aa23.92■■□□□ 1.42
EDC3-215ENST00000569007 PRIM1P49642 420 aaKnown RBP23.92■■□□□ 1.42
EDC3-215ENST00000569007 SYTL4Q96C24 671 aaPredicted RBP23.91■■□□□ 1.42
EDC3-215ENST00000569007 PCDH11XQ9BZA7 1347 aa23.9■■□□□ 1.42
EDC3-215ENST00000569007 PCDH11YQ9BZA8 1340 aa23.9■■□□□ 1.42
EDC3-215ENST00000569007 ANO8Q9HCE9 1232 aaPredicted RBP23.9■■□□□ 1.42
EDC3-215ENST00000569007 DOT1LQ8TEK3 1739 aa23.9■■□□□ 1.42
EDC3-215ENST00000569007 CC2D1BQ5T0F9 858 aaKnown RBP23.89■■□□□ 1.41
EDC3-215ENST00000569007 CYP27B1O15528 508 aa23.88■■□□□ 1.41
EDC3-215ENST00000569007 LRP5O75197 1615 aa23.87■■□□□ 1.41
EDC3-215ENST00000569007 IGSF1Q8N6C5 1336 aa23.86■■□□□ 1.41
EDC3-215ENST00000569007 SPG7Q9UQ90 795 aa23.86■■□□□ 1.41
EDC3-215ENST00000569007 PKD1L3Q7Z443 1732 aa23.86■■□□□ 1.41
EDC3-215ENST00000569007 CNGB1Q14028 1251 aaPredicted RBP23.84■■□□□ 1.41
EDC3-215ENST00000569007 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.84■■□□□ 1.41
EDC3-215ENST00000569007 NPC1L1Q9UHC9 1359 aa23.83■■□□□ 1.41
EDC3-215ENST00000569007 STK32BQ9NY57 414 aa23.83■■□□□ 1.41
EDC3-215ENST00000569007 MTHFSP49914 203 aa23.82■■□□□ 1.4
EDC3-215ENST00000569007 LRRC4BQ9NT99 713 aa23.81■■□□□ 1.4
EDC3-215ENST00000569007 IL13P35225 146 aa23.8■■□□□ 1.4
EDC3-215ENST00000569007 SLC15A2Q16348 729 aa23.8■■□□□ 1.4
EDC3-215ENST00000569007 NKX1-1Q15270 411 aaPredicted RBP23.79■■□□□ 1.4
EDC3-215ENST00000569007 SLC27A3Q5K4L6 730 aa23.79■■□□□ 1.4
EDC3-215ENST00000569007 AEBP1Q8IUX7 1158 aa23.79■■□□□ 1.4
EDC3-215ENST00000569007 PDGFDQ9GZP0 370 aaPredicted RBP23.78■■□□□ 1.4
EDC3-215ENST00000569007 PAPPAQ13219 1627 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 TOGARAM1Q9Y4F4 1720 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 PHKG2P15735 406 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 IFNL2Q8IZJ0 200 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
EDC3-215ENST00000569007 KCNQ4P56696 695 aa23.76■■□□□ 1.39
EDC3-215ENST00000569007 SULT6B1Q6IMI4 303 aa23.76■■□□□ 1.39
EDC3-215ENST00000569007 CASZ1Q86V15 1759 aa23.74■■□□□ 1.39
EDC3-215ENST00000569007 ZNF827Q17R98 1081 aa23.74■■□□□ 1.39
EDC3-215ENST00000569007 PLEKHO1Q53GL0 409 aaPredicted RBP23.74■■□□□ 1.39
EDC3-215ENST00000569007 SPON1Q9HCB6 807 aa23.74■■□□□ 1.39
EDC3-215ENST00000569007 LY75O60449 1722 aa23.73■■□□□ 1.39
EDC3-215ENST00000569007 CCNL1Q9UK58 526 aaPredicted RBP23.73■■□□□ 1.39
EDC3-215ENST00000569007 KDRP35968 1356 aa23.73■■□□□ 1.39
EDC3-215ENST00000569007 PIGBQ92521 554 aa23.72■■□□□ 1.39
EDC3-215ENST00000569007 ITGB4P16144 1822 aa23.72■■□□□ 1.39
EDC3-215ENST00000569007 AMOTQ4VCS5 1084 aa23.71■■□□□ 1.39
EDC3-215ENST00000569007 ZNF530Q6P9A1 599 aaPredicted RBP23.71■■□□□ 1.39
EDC3-215ENST00000569007 AKT1S1Q96B36 256 aa23.71■■□□□ 1.39
EDC3-215ENST00000569007 PALLDQ8WX93 1383 aa23.7■■□□□ 1.38
EDC3-215ENST00000569007 DIAPH1O60610 1272 aaKnown RBP23.7■■□□□ 1.38
EDC3-215ENST00000569007 ZBTB7AO95365 584 aa23.7■■□□□ 1.38
EDC3-215ENST00000569007 TMOD3Q9NYL9 352 aa23.69■■□□□ 1.38
EDC3-215ENST00000569007 SMARCC1Q92922 1105 aaPredicted RBP23.68■■□□□ 1.38
EDC3-215ENST00000569007 HSP90AB1P08238 724 aaKnown RBP23.67■■□□□ 1.38
EDC3-215ENST00000569007 HMOX1P09601 288 aa23.67■■□□□ 1.38
EDC3-215ENST00000569007 COL3A1P02461 1466 aaPredicted RBP23.67■■□□□ 1.38
EDC3-215ENST00000569007 DCAF5Q96JK2 942 aa23.66■■□□□ 1.38
EDC3-215ENST00000569007 ATF5Q9Y2D1 282 aaPredicted RBP23.66■■□□□ 1.38
EDC3-215ENST00000569007 C1orf141Q5JVX7 400 aa23.65■■□□□ 1.38
EDC3-215ENST00000569007 TFCP2L1Q9NZI6 479 aa23.65■■□□□ 1.38
EDC3-215ENST00000569007 PPP1R1BQ9UD71 204 aaPredicted RBP23.64■■□□□ 1.37
EDC3-215ENST00000569007 KDM6AO15550 1401 aaPredicted RBP23.64■■□□□ 1.37
EDC3-215ENST00000569007 ERVV-2B6SEH9 535 aa23.63■■□□□ 1.37
EDC3-215ENST00000569007 MTFR1LQ9H019 292 aa23.63■■□□□ 1.37
EDC3-215ENST00000569007 ASAP1Q9ULH1 1129 aa23.63■■□□□ 1.37
EDC3-215ENST00000569007 PNPLA7Q6ZV29 1317 aa23.62■■□□□ 1.37
EDC3-215ENST00000569007 U2SURPO15042 1029 aaKnown RBP23.62■■□□□ 1.37
EDC3-215ENST00000569007 PPP2R1AP30153 589 aa23.61■■□□□ 1.37
EDC3-215ENST00000569007 PTGER2P43116 358 aa23.61■■□□□ 1.37
EDC3-215ENST00000569007 CFAP53Q96M91 514 aa23.6■■□□□ 1.37
EDC3-215ENST00000569007 ATG3Q9NT62 314 aa23.6■■□□□ 1.37
EDC3-215ENST00000569007 C5P01031 1676 aa23.6■■□□□ 1.37
EDC3-215ENST00000569007 QSER1Q2KHR3 1735 aa23.59■■□□□ 1.37
EDC3-215ENST00000569007 TUBGCP6Q96RT7 1819 aa23.59■■□□□ 1.37
EDC3-215ENST00000569007 LOC102724428A0A0B4J2F2 783 aa23.59■■□□□ 1.37
EDC3-215ENST00000569007 SIK1P57059 783 aa23.59■■□□□ 1.37
EDC3-215ENST00000569007 CABP4P57796 275 aa23.59■■□□□ 1.37
EDC3-215ENST00000569007 HMGB2P26583 209 aaKnown RBP23.57■■□□□ 1.36
EDC3-215ENST00000569007 AKAP4Q5JQC9 854 aa23.57■■□□□ 1.36
EDC3-215ENST00000569007 TAF1LQ8IZX4 1826 aa23.56■■□□□ 1.36
EDC3-215ENST00000569007 MTHFSDQ2M296 383 aaKnown RBP23.56■■□□□ 1.36
EDC3-215ENST00000569007 SLC16A10Q8TF71 515 aa23.56■■□□□ 1.36
EDC3-215ENST00000569007 SGIP1Q9BQI5 828 aa23.56■■□□□ 1.36
EDC3-215ENST00000569007 ITPK1Q13572 414 aa23.54■■□□□ 1.36
EDC3-215ENST00000569007 COL23A1Q86Y22 540 aaPredicted RBP23.54■■□□□ 1.36
EDC3-215ENST00000569007 NFATC2IPQ8NCF5 419 aa23.54■■□□□ 1.36
EDC3-215ENST00000569007 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms