RNA–Protein interactions for RNA: ENST00000568977.1

CPNE7-209, Transcript of copine 7, humanhuman

TSL 5

Gene CPNE7, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-209ENST00000568977 HSP90AB2PQ58FF8 381 aa25.76■■□□□ 1.71
CPNE7-209ENST00000568977 USHBP1Q8N6Y0 703 aa25.76■■□□□ 1.71
CPNE7-209ENST00000568977 CGNL1Q0VF96 1302 aa25.76■■□□□ 1.71
CPNE7-209ENST00000568977 EMILIN1Q9Y6C2 1016 aa25.74■■□□□ 1.71
CPNE7-209ENST00000568977 ZCRB1Q8TBF4 217 aaKnown RBP25.73■■□□□ 1.71
CPNE7-209ENST00000568977 SPON1Q9HCB6 807 aa25.73■■□□□ 1.71
CPNE7-209ENST00000568977 STK32BQ9NY57 414 aa25.73■■□□□ 1.71
CPNE7-209ENST00000568977 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
CPNE7-209ENST00000568977 RAPGEF4Q8WZA2 1011 aa25.71■■□□□ 1.71
CPNE7-209ENST00000568977 SLC15A2Q16348 729 aa25.7■■□□□ 1.7
CPNE7-209ENST00000568977 PDGFDQ9GZP0 370 aaPredicted RBP25.7■■□□□ 1.7
CPNE7-209ENST00000568977 PKD1L3Q7Z443 1732 aa25.68■■□□□ 1.7
CPNE7-209ENST00000568977 NSD2O96028 1365 aa25.68■■□□□ 1.7
CPNE7-209ENST00000568977 PPM1GO15355 546 aaPredicted RBP25.67■■□□□ 1.7
CPNE7-209ENST00000568977 LY75O60449 1722 aa25.67■■□□□ 1.7
CPNE7-209ENST00000568977 TATP17735 454 aaPredicted RBP25.67■■□□□ 1.7
CPNE7-209ENST00000568977 NCAPD2Q15021 1401 aa25.67■■□□□ 1.7
CPNE7-209ENST00000568977 SYTL4Q96C24 671 aaPredicted RBP25.67■■□□□ 1.7
CPNE7-209ENST00000568977 PPP1R1BQ9UD71 204 aaPredicted RBP25.67■■□□□ 1.7
CPNE7-209ENST00000568977 PRIM1P49642 420 aaKnown RBP25.65■■□□□ 1.7
CPNE7-209ENST00000568977 LRRC4BQ9NT99 713 aa25.64■■□□□ 1.7
CPNE7-209ENST00000568977 WASHC2AQ641Q2 1341 aa25.63■■□□□ 1.69
CPNE7-209ENST00000568977 PCDH11XQ9BZA7 1347 aa25.63■■□□□ 1.69
CPNE7-209ENST00000568977 PCDH11YQ9BZA8 1340 aa25.63■■□□□ 1.69
CPNE7-209ENST00000568977 ZBTB7AO95365 584 aa25.63■■□□□ 1.69
CPNE7-209ENST00000568977 PANK3Q9H999 370 aa25.62■■□□□ 1.69
CPNE7-209ENST00000568977 QSER1Q2KHR3 1735 aa25.62■■□□□ 1.69
CPNE7-209ENST00000568977 TOGARAM1Q9Y4F4 1720 aa25.62■■□□□ 1.69
CPNE7-209ENST00000568977 ZNF827Q17R98 1081 aa25.61■■□□□ 1.69
CPNE7-209ENST00000568977 SLC27A3Q5K4L6 730 aa25.61■■□□□ 1.69
CPNE7-209ENST00000568977 POLKQ9UBT6 870 aa25.61■■□□□ 1.69
CPNE7-209ENST00000568977 TUBGCP6Q96RT7 1819 aa25.6■■□□□ 1.69
CPNE7-209ENST00000568977 TNNT2P45379 298 aaPredicted RBP25.59■■□□□ 1.69
CPNE7-209ENST00000568977 PTGER2P43116 358 aa25.57■■□□□ 1.68
CPNE7-209ENST00000568977 MTFR1LQ9H019 292 aa25.57■■□□□ 1.68
CPNE7-209ENST00000568977 ATF5Q9Y2D1 282 aaPredicted RBP25.57■■□□□ 1.68
CPNE7-209ENST00000568977 ITGB4P16144 1822 aa25.56■■□□□ 1.68
CPNE7-209ENST00000568977 CYP27B1O15528 508 aa25.56■■□□□ 1.68
CPNE7-209ENST00000568977 EYA1Q99502 592 aa25.56■■□□□ 1.68
CPNE7-209ENST00000568977 KCNQ4P56696 695 aa25.55■■□□□ 1.68
CPNE7-209ENST00000568977 AKT1S1Q96B36 256 aa25.55■■□□□ 1.68
CPNE7-209ENST00000568977 EIF4A2Q14240 407 aaKnown RBP25.53■■□□□ 1.68
CPNE7-209ENST00000568977 CCNL1Q9UK58 526 aaPredicted RBP25.52■■□□□ 1.68
CPNE7-209ENST00000568977 C5P01031 1676 aa25.52■■□□□ 1.68
CPNE7-209ENST00000568977 KIF7Q2M1P5 1343 aa25.5■■□□□ 1.67
CPNE7-209ENST00000568977 SGIP1Q9BQI5 828 aa25.5■■□□□ 1.67
CPNE7-209ENST00000568977 SPG7Q9UQ90 795 aa25.5■■□□□ 1.67
CPNE7-209ENST00000568977 PNPLA7Q6ZV29 1317 aa25.49■■□□□ 1.67
CPNE7-209ENST00000568977 TAF1LQ8IZX4 1826 aa25.49■■□□□ 1.67
CPNE7-209ENST00000568977 PALLDQ8WX93 1383 aa25.48■■□□□ 1.67
CPNE7-209ENST00000568977 MPRIPQ6WCQ1 1025 aa25.48■■□□□ 1.67
CPNE7-209ENST00000568977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.48■■□□□ 1.67
CPNE7-209ENST00000568977 KNSTRNQ9Y448 316 aa25.48■■□□□ 1.67
CPNE7-209ENST00000568977 PLEKHG2Q9H7P9 1386 aa25.47■■□□□ 1.67
CPNE7-209ENST00000568977 IGSF1Q8N6C5 1336 aa25.47■■□□□ 1.67
CPNE7-209ENST00000568977 COL24A1Q17RW2 1714 aa25.47■■□□□ 1.67
CPNE7-209ENST00000568977 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
CPNE7-209ENST00000568977 NKX1-1Q15270 411 aaPredicted RBP25.46■■□□□ 1.67
CPNE7-209ENST00000568977 TFCP2L1Q9NZI6 479 aa25.46■■□□□ 1.67
CPNE7-209ENST00000568977 FHDC1Q9C0D6 1143 aaPredicted RBP25.44■■□□□ 1.66
CPNE7-209ENST00000568977 SLC16A10Q8TF71 515 aa25.43■■□□□ 1.66
CPNE7-209ENST00000568977 PHKG2P15735 406 aa25.42■■□□□ 1.66
CPNE7-209ENST00000568977 AMER1Q5JTC6 1135 aaPredicted RBP25.42■■□□□ 1.66
CPNE7-209ENST00000568977 DCAF8L1A6NGE4 600 aa25.41■■□□□ 1.66
CPNE7-209ENST00000568977 IFNL2Q8IZJ0 200 aa25.41■■□□□ 1.66
CPNE7-209ENST00000568977 PIGBQ92521 554 aa25.41■■□□□ 1.66
CPNE7-209ENST00000568977 ARXQ96QS3 562 aa25.41■■□□□ 1.66
CPNE7-209ENST00000568977 C4BP0C0L5 1744 aa25.4■■□□□ 1.66
CPNE7-209ENST00000568977 SMARCC1Q92922 1105 aaPredicted RBP25.4■■□□□ 1.66
CPNE7-209ENST00000568977 SYT17Q9BSW7 474 aa25.4■■□□□ 1.66
CPNE7-209ENST00000568977 MAP3K5Q99683 1374 aa25.38■■□□□ 1.65
CPNE7-209ENST00000568977 TMOD3Q9NYL9 352 aa25.37■■□□□ 1.65
CPNE7-209ENST00000568977 UBR3Q6ZT12 1888 aa25.35■■□□□ 1.65
CPNE7-209ENST00000568977 POLD1P28340 1107 aa25.35■■□□□ 1.65
CPNE7-209ENST00000568977 COL23A1Q86Y22 540 aaPredicted RBP25.35■■□□□ 1.65
CPNE7-209ENST00000568977 AEBP1Q8IUX7 1158 aa25.35■■□□□ 1.65
CPNE7-209ENST00000568977 HMGB2P26583 209 aaKnown RBP25.34■■□□□ 1.65
CPNE7-209ENST00000568977 MSH5O43196 834 aa25.33■■□□□ 1.65
CPNE7-209ENST00000568977 PLEKHO1Q53GL0 409 aaPredicted RBP25.33■■□□□ 1.65
CPNE7-209ENST00000568977 KDRP35968 1356 aa25.32■■□□□ 1.64
CPNE7-209ENST00000568977 KDM6AO15550 1401 aaPredicted RBP25.32■■□□□ 1.64
CPNE7-209ENST00000568977 LOC102724428A0A0B4J2F2 783 aa25.31■■□□□ 1.64
CPNE7-209ENST00000568977 PER1O15534 1290 aaPredicted RBP25.31■■□□□ 1.64
CPNE7-209ENST00000568977 YY1P25490 414 aa25.31■■□□□ 1.64
CPNE7-209ENST00000568977 SIK1P57059 783 aa25.31■■□□□ 1.64
CPNE7-209ENST00000568977 ZNF530Q6P9A1 599 aaPredicted RBP25.31■■□□□ 1.64
CPNE7-209ENST00000568977 ASAP1Q9ULH1 1129 aa25.31■■□□□ 1.64
CPNE7-209ENST00000568977 HSP90AB1P08238 724 aaKnown RBP25.3■■□□□ 1.64
CPNE7-209ENST00000568977 IL13P35225 146 aa25.3■■□□□ 1.64
CPNE7-209ENST00000568977 AMOTQ4VCS5 1084 aa25.3■■□□□ 1.64
CPNE7-209ENST00000568977 SULT6B1Q6IMI4 303 aa25.3■■□□□ 1.64
CPNE7-209ENST00000568977 KLHL34Q8N239 644 aa25.3■■□□□ 1.64
CPNE7-209ENST00000568977 AK7Q96M32 723 aa25.3■■□□□ 1.64
CPNE7-209ENST00000568977 FLAD1Q8NFF5 587 aa25.29■■□□□ 1.64
CPNE7-209ENST00000568977 DCAF5Q96JK2 942 aa25.29■■□□□ 1.64
CPNE7-209ENST00000568977 CC2D1BQ5T0F9 858 aaKnown RBP25.28■■□□□ 1.64
CPNE7-209ENST00000568977 ATG3Q9NT62 314 aa25.28■■□□□ 1.64
CPNE7-209ENST00000568977 ERVV-2B6SEH9 535 aa25.27■■□□□ 1.64
CPNE7-209ENST00000568977 MTHFSP49914 203 aa25.27■■□□□ 1.64
CPNE7-209ENST00000568977 MSL1Q68DK7 614 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms