RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 SYT17Q9BSW7 474 aa25.14■■□□□ 1.62
SYNGR3-205ENST00000568896 UTRNP46939 3433 aa25.12■■□□□ 1.61
SYNGR3-205ENST00000568896 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
SYNGR3-205ENST00000568896 ZEB1P37275 1124 aaPredicted RBP25.11■■□□□ 1.61
SYNGR3-205ENST00000568896 RRS1Q15050 365 aaKnown RBP25.11■■□□□ 1.61
SYNGR3-205ENST00000568896 NSD2O96028 1365 aa25.1■■□□□ 1.61
SYNGR3-205ENST00000568896 HOXC9P31274 260 aa25.1■■□□□ 1.61
SYNGR3-205ENST00000568896 RTL1A6NKG5 1358 aa25.09■■□□□ 1.61
SYNGR3-205ENST00000568896 AMPHP49418 695 aa25.09■■□□□ 1.61
SYNGR3-205ENST00000568896 KNSTRNQ9Y448 316 aa25.09■■□□□ 1.61
SYNGR3-205ENST00000568896 BTAF1O14981 1849 aa25.08■■□□□ 1.61
SYNGR3-205ENST00000568896 KCNQ4P56696 695 aa25.08■■□□□ 1.61
SYNGR3-205ENST00000568896 ARXQ96QS3 562 aa25.08■■□□□ 1.61
SYNGR3-205ENST00000568896 PAPPAQ13219 1627 aa25.08■■□□□ 1.6
SYNGR3-205ENST00000568896 PRIM1P49642 420 aaKnown RBP25.06■■□□□ 1.6
SYNGR3-205ENST00000568896 AKT1S1Q96B36 256 aa25.06■■□□□ 1.6
SYNGR3-205ENST00000568896 SYTL4Q96C24 671 aaPredicted RBP25.06■■□□□ 1.6
SYNGR3-205ENST00000568896 KAT6BQ8WYB5 2073 aa25.05■■□□□ 1.6
SYNGR3-205ENST00000568896 PER1O15534 1290 aaPredicted RBP25.04■■□□□ 1.6
SYNGR3-205ENST00000568896 AMER1Q5JTC6 1135 aaPredicted RBP25.04■■□□□ 1.6
SYNGR3-205ENST00000568896 KIF24Q5T7B8 1368 aa25.04■■□□□ 1.6
SYNGR3-205ENST00000568896 ZCRB1Q8TBF4 217 aaKnown RBP25.03■■□□□ 1.6
SYNGR3-205ENST00000568896 EMILIN1Q9Y6C2 1016 aa25.03■■□□□ 1.6
SYNGR3-205ENST00000568896 SLC27A3Q5K4L6 730 aa25.02■■□□□ 1.6
SYNGR3-205ENST00000568896 FLT4P35916 1363 aa25.02■■□□□ 1.6
SYNGR3-205ENST00000568896 NBPF6Q5VWK0 638 aa25.01■■□□□ 1.59
SYNGR3-205ENST00000568896 NBPF4Q96M43 638 aa25.01■■□□□ 1.59
SYNGR3-205ENST00000568896 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
SYNGR3-205ENST00000568896 TNNT2P45379 298 aaPredicted RBP25■■□□□ 1.59
SYNGR3-205ENST00000568896 USHBP1Q8N6Y0 703 aa25■■□□□ 1.59
SYNGR3-205ENST00000568896 MEGF6O75095 1541 aa25■■□□□ 1.59
SYNGR3-205ENST00000568896 INSRP06213 1382 aa24.99■■□□□ 1.59
SYNGR3-205ENST00000568896 PNPLA7Q6ZV29 1317 aa24.99■■□□□ 1.59
SYNGR3-205ENST00000568896 MORC1Q86VD1 984 aa24.99■■□□□ 1.59
SYNGR3-205ENST00000568896 ZNF784Q8NCA9 323 aaPredicted RBP24.99■■□□□ 1.59
SYNGR3-205ENST00000568896 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
SYNGR3-205ENST00000568896 TFCP2L1Q9NZI6 479 aa24.98■■□□□ 1.59
SYNGR3-205ENST00000568896 POLKQ9UBT6 870 aa24.98■■□□□ 1.59
SYNGR3-205ENST00000568896 PPM1GO15355 546 aaPredicted RBP24.96■■□□□ 1.59
SYNGR3-205ENST00000568896 KLHL34Q8N239 644 aa24.96■■□□□ 1.59
SYNGR3-205ENST00000568896 SMG6Q86US8 1419 aaKnown RBP24.95■■□□□ 1.59
SYNGR3-205ENST00000568896 RGPD2P0DJD1 1756 aa24.95■■□□□ 1.59
SYNGR3-205ENST00000568896 NPC1L1Q9UHC9 1359 aa24.95■■□□□ 1.59
SYNGR3-205ENST00000568896 SLC16A10Q8TF71 515 aa24.95■■□□□ 1.58
SYNGR3-205ENST00000568896 MAP2P11137 1827 aaKnown RBP24.95■■□□□ 1.58
SYNGR3-205ENST00000568896 MAP3K5Q99683 1374 aa24.94■■□□□ 1.58
SYNGR3-205ENST00000568896 POLD1P28340 1107 aa24.93■■□□□ 1.58
SYNGR3-205ENST00000568896 CC2D1BQ5T0F9 858 aaKnown RBP24.93■■□□□ 1.58
SYNGR3-205ENST00000568896 CCNL1Q9UK58 526 aaPredicted RBP24.93■■□□□ 1.58
SYNGR3-205ENST00000568896 GPR162Q16538 588 aa24.91■■□□□ 1.58
SYNGR3-205ENST00000568896 RAPGEF4Q8WZA2 1011 aa24.91■■□□□ 1.58
SYNGR3-205ENST00000568896 DOT1LQ8TEK3 1739 aa24.91■■□□□ 1.58
SYNGR3-205ENST00000568896 SHANK3Q9BYB0 1731 aa24.9■■□□□ 1.58
SYNGR3-205ENST00000568896 TATP17735 454 aaPredicted RBP24.89■■□□□ 1.58
SYNGR3-205ENST00000568896 COL23A1Q86Y22 540 aaPredicted RBP24.88■■□□□ 1.57
SYNGR3-205ENST00000568896 NLGN2Q8NFZ4 835 aa24.88■■□□□ 1.57
SYNGR3-205ENST00000568896 MSH5O43196 834 aa24.87■■□□□ 1.57
SYNGR3-205ENST00000568896 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
SYNGR3-205ENST00000568896 CNGB1Q14028 1251 aaPredicted RBP24.86■■□□□ 1.57
SYNGR3-205ENST00000568896 LY75O60449 1722 aa24.85■■□□□ 1.57
SYNGR3-205ENST00000568896 GOLGB1Q14789 3259 aaKnown RBP24.85■■□□□ 1.57
SYNGR3-205ENST00000568896 QSER1Q2KHR3 1735 aa24.84■■□□□ 1.57
SYNGR3-205ENST00000568896 TUBGCP6Q96RT7 1819 aa24.84■■□□□ 1.57
SYNGR3-205ENST00000568896 EIF4A2Q14240 407 aaKnown RBP24.83■■□□□ 1.57
SYNGR3-205ENST00000568896 MPRIPQ6WCQ1 1025 aa24.83■■□□□ 1.57
SYNGR3-205ENST00000568896 NCAPD2Q15021 1401 aa24.83■■□□□ 1.57
SYNGR3-205ENST00000568896 CYP27B1O15528 508 aa24.82■■□□□ 1.56
SYNGR3-205ENST00000568896 MSL1Q68DK7 614 aa24.82■■□□□ 1.56
SYNGR3-205ENST00000568896 PCDH11XQ9BZA7 1347 aa24.82■■□□□ 1.56
SYNGR3-205ENST00000568896 PCDH11YQ9BZA8 1340 aa24.82■■□□□ 1.56
SYNGR3-205ENST00000568896 COL24A1Q17RW2 1714 aa24.81■■□□□ 1.56
SYNGR3-205ENST00000568896 EYA1Q99502 592 aa24.8■■□□□ 1.56
SYNGR3-205ENST00000568896 MTHFSP49914 203 aa24.79■■□□□ 1.56
SYNGR3-205ENST00000568896 PALLDQ8WX93 1383 aa24.78■■□□□ 1.56
SYNGR3-205ENST00000568896 CHD4Q14839 1912 aa24.77■■□□□ 1.56
SYNGR3-205ENST00000568896 DDX10Q13206 875 aaKnown RBP24.77■■□□□ 1.56
SYNGR3-205ENST00000568896 YBX3P16989 372 aaKnown RBP eCLIP24.76■■□□□ 1.55
SYNGR3-205ENST00000568896 SMIM5Q71RC9 77 aa24.75■■□□□ 1.55
SYNGR3-205ENST00000568896 AMIGO3Q86WK7 504 aa24.75■■□□□ 1.55
SYNGR3-205ENST00000568896 IGSF1Q8N6C5 1336 aa24.75■■□□□ 1.55
SYNGR3-205ENST00000568896 C1QTNF8P60827 252 aa24.74■■□□□ 1.55
SYNGR3-205ENST00000568896 PIGBQ92521 554 aa24.74■■□□□ 1.55
SYNGR3-205ENST00000568896 IL13P35225 146 aa24.72■■□□□ 1.55
SYNGR3-205ENST00000568896 NKX1-1Q15270 411 aaPredicted RBP24.71■■□□□ 1.55
SYNGR3-205ENST00000568896 SMARCC1Q92922 1105 aaPredicted RBP24.71■■□□□ 1.55
SYNGR3-205ENST00000568896 COL3A1P02461 1466 aaPredicted RBP24.7■■□□□ 1.55
SYNGR3-205ENST00000568896 SENP3-EIF4A1A0A087X0R7 540 aa24.7■■□□□ 1.54
SYNGR3-205ENST00000568896 FLAD1Q8NFF5 587 aa24.7■■□□□ 1.54
SYNGR3-205ENST00000568896 PKD1L3Q7Z443 1732 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 PPP2R1AP30153 589 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 AK7Q96M32 723 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 SPG7Q9UQ90 795 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 TOGARAM1Q9Y4F4 1720 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 C5P01031 1676 aa24.69■■□□□ 1.54
SYNGR3-205ENST00000568896 GRIN3BO60391 1043 aa24.68■■□□□ 1.54
SYNGR3-205ENST00000568896 PHF14O94880 888 aa24.68■■□□□ 1.54
SYNGR3-205ENST00000568896 DIAPH1O60610 1272 aaKnown RBP24.66■■□□□ 1.54
SYNGR3-205ENST00000568896 AEBP1Q8IUX7 1158 aa24.66■■□□□ 1.54
SYNGR3-205ENST00000568896 CD2APQ9Y5K6 639 aa24.66■■□□□ 1.54
SYNGR3-205ENST00000568896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms