RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PRDM15P57071 1507 aaPredicted RBP8.95□□□□□ -0.98
CDH13-211ENST00000568770 CROCC2H7BZ55 1655 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 TET3O43151 1660 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 SRCAPQ6ZRS2 3230 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 MYO5BQ9ULV0 1848 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 SPTLC1O15269 473 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 ACTN4O43707 911 aaKnown RBP8.94□□□□□ -0.98
CDH13-211ENST00000568770 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
CDH13-211ENST00000568770 LRRC9Q6ZRR7 1453 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 DUOX2Q9NRD8 1548 aa8.94□□□□□ -0.98
CDH13-211ENST00000568770 CHD2O14647 1828 aaKnown RBP8.94□□□□□ -0.98
CDH13-211ENST00000568770 CLK2P49760 499 aaKnown RBP8.93□□□□□ -0.98
CDH13-211ENST00000568770 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.93□□□□□ -0.98
CDH13-211ENST00000568770 TMEM2Q9UHN6 1383 aa8.93□□□□□ -0.98
CDH13-211ENST00000568770 ARHGAP31Q2M1Z3 1444 aa8.93□□□□□ -0.98
CDH13-211ENST00000568770 EFCAB6Q5THR3 1501 aa8.93□□□□□ -0.98
CDH13-211ENST00000568770 NWD1Q149M9 1564 aa8.93□□□□□ -0.98
CDH13-211ENST00000568770 COL16A1Q07092 1604 aaPredicted RBP8.92□□□□□ -0.98
CDH13-211ENST00000568770 KCNA6P17658 529 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 ATP6V1AP38606 617 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 USP46P62068 366 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 DIXDC1Q155Q3 683 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 KMT5BQ4FZB7 885 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
CDH13-211ENST00000568770 PCMTD1Q96MG8 357 aaPredicted RBP8.92□□□□□ -0.98
CDH13-211ENST00000568770 GTF3C3Q9Y5Q9 886 aa8.92□□□□□ -0.98
CDH13-211ENST00000568770 QPCTQ16769 361 aa8.91□□□□□ -0.98
CDH13-211ENST00000568770 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
CDH13-211ENST00000568770 MORN1Q5T089 497 aa8.91□□□□□ -0.98
CDH13-211ENST00000568770 SLC26A8Q96RN1 970 aa8.91□□□□□ -0.98
CDH13-211ENST00000568770 NKTRP30414 1462 aaKnown RBP8.9□□□□□ -0.98
CDH13-211ENST00000568770 JCADQ9P266 1359 aa8.9□□□□□ -0.98
CDH13-211ENST00000568770 FDX1P10109 184 aa8.9□□□□□ -0.98
CDH13-211ENST00000568770 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
CDH13-211ENST00000568770 SLAIN2Q9P270 581 aa8.9□□□□□ -0.98
CDH13-211ENST00000568770 SLC27A5Q9Y2P5 690 aa8.9□□□□□ -0.98
CDH13-211ENST00000568770 MSH6P52701 1360 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 SHPRHQ149N8 1683 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 IDI1Q13907 227 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 CABLES1Q8TDN4 633 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 NECTIN2Q92692 538 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 RNF166Q96A37 237 aaPredicted RBP8.89□□□□□ -0.99
CDH13-211ENST00000568770 LRP6O75581 1613 aa8.89□□□□□ -0.99
CDH13-211ENST00000568770 MYOM3Q5VTT5 1437 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 ERBINQ96RT1 1412 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 KIF15Q9NS87 1388 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 MMRN1Q13201 1228 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 BLOC1S3Q6QNY0 202 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 ADGRB3O60242 1522 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.88□□□□□ -0.99
CDH13-211ENST00000568770 GCC2Q8IWJ2 1684 aa8.88□□□□□ -0.99
CDH13-211ENST00000568770 LILRB3O75022 631 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 GJA5P36382 358 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 TUSC1Q2TAM9 212 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
CDH13-211ENST00000568770 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 RRP7BPQ9NSQ0 103 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
CDH13-211ENST00000568770 KANK1Q14678 1352 aa8.86□□□□□ -0.99
CDH13-211ENST00000568770 HRCP23327 699 aa8.86□□□□□ -0.99
CDH13-211ENST00000568770 COPS2P61201 443 aa8.86□□□□□ -0.99
CDH13-211ENST00000568770 MEX3CQ5U5Q3 659 aaKnown RBP8.86□□□□□ -0.99
CDH13-211ENST00000568770 PRR14Q9BWN1 585 aa8.86□□□□□ -0.99
CDH13-211ENST00000568770 PTPN23Q9H3S7 1636 aa8.86□□□□□ -0.99
CDH13-211ENST00000568770 LMTK2Q8IWU2 1503 aa8.85□□□□□ -0.99
CDH13-211ENST00000568770 SPATA31A6Q5VVP1 1343 aa8.85□□□□□ -0.99
CDH13-211ENST00000568770 GRIPAP1Q4V328 841 aa8.85□□□□□ -0.99
CDH13-211ENST00000568770 KANK4Q5T7N3 995 aaPredicted RBP8.85□□□□□ -0.99
CDH13-211ENST00000568770 ZNF772Q68DY9 489 aaPredicted RBP8.85□□□□□ -0.99
CDH13-211ENST00000568770 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
CDH13-211ENST00000568770 ABCC5O15440 1437 aa8.85□□□□□ -0.99
CDH13-211ENST00000568770 AHDC1Q5TGY3 1603 aaPredicted RBP8.84□□□□□ -0.99
CDH13-211ENST00000568770 NOS1P29475 1434 aa8.84□□□□□ -0.99
CDH13-211ENST00000568770 FGD6Q6ZV73 1430 aa8.84□□□□□ -0.99
CDH13-211ENST00000568770 ZNF516Q92618 1163 aa8.84□□□□□ -0.99
CDH13-211ENST00000568770 THAP11Q96EK4 314 aa8.84□□□□□ -0.99
CDH13-211ENST00000568770 TMEM131LA2VDJ0 1609 aa8.83□□□□□ -1
CDH13-211ENST00000568770 DIP2AQ14689 1571 aa8.83□□□□□ -1
CDH13-211ENST00000568770 VPS8Q8N3P4 1428 aa8.83□□□□□ -1
CDH13-211ENST00000568770 TJAP1Q5JTD0 557 aa8.83□□□□□ -1
CDH13-211ENST00000568770 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
CDH13-211ENST00000568770 MTRQ99707 1265 aa8.83□□□□□ -1
CDH13-211ENST00000568770 EP400Q96L91 3159 aa8.82□□□□□ -1
CDH13-211ENST00000568770 ZFYVE9O95405 1425 aa8.82□□□□□ -1
CDH13-211ENST00000568770 DAPK1P53355 1430 aa8.82□□□□□ -1
CDH13-211ENST00000568770 C6orf229H3BNL8 230 aa8.82□□□□□ -1
CDH13-211ENST00000568770 RXRBP28702 533 aa8.82□□□□□ -1
CDH13-211ENST00000568770 RFC5P40937 340 aa8.82□□□□□ -1
CDH13-211ENST00000568770 BRICD5Q6PL45 260 aa8.82□□□□□ -1
CDH13-211ENST00000568770 NYAP1Q6ZVC0 841 aa8.82□□□□□ -1
CDH13-211ENST00000568770 C14orf37Q86TY3 774 aa8.82□□□□□ -1
CDH13-211ENST00000568770 HCSTQ9UBK5 93 aa8.82□□□□□ -1
CDH13-211ENST00000568770 PLEKHG1Q9ULL1 1385 aa8.82□□□□□ -1
CDH13-211ENST00000568770 NUTM2BA6NNL0 878 aaPredicted RBP8.81□□□□□ -1
CDH13-211ENST00000568770 NUTM2EB1AL46 878 aaPredicted RBP8.81□□□□□ -1
CDH13-211ENST00000568770 CFAP99D6REC4 459 aa8.81□□□□□ -1
CDH13-211ENST00000568770 PPP1R15AO75807 674 aaPredicted RBP8.81□□□□□ -1
CDH13-211ENST00000568770 MTMR2Q13614 643 aa8.81□□□□□ -1
CDH13-211ENST00000568770 NUTM2DQ5VT03 806 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms