RNA–Protein interactions for RNA: ENST00000568562.1

ATP6V0C-204, Transcript of ATPase H+ transporting V0 subunit c, humanhuman

TSL 3 BASIC

Gene ATP6V0C, Length 477 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0C-204ENST00000568562 TONSLQ96HA7 1378 aa26.33■■□□□ 1.81
ATP6V0C-204ENST00000568562 POLD1P28340 1107 aa26.33■■□□□ 1.81
ATP6V0C-204ENST00000568562 HOXC9P31274 260 aa26.33■■□□□ 1.81
ATP6V0C-204ENST00000568562 PRIM1P49642 420 aaKnown RBP26.33■■□□□ 1.81
ATP6V0C-204ENST00000568562 FBLN1P23142 703 aa26.32■■□□□ 1.8
ATP6V0C-204ENST00000568562 COG3Q96JB2 828 aa26.32■■□□□ 1.8
ATP6V0C-204ENST00000568562 PUS7Q96PZ0 661 aaKnown RBP26.32■■□□□ 1.8
ATP6V0C-204ENST00000568562 TFCP2L1Q9NZI6 479 aa26.32■■□□□ 1.8
ATP6V0C-204ENST00000568562 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
ATP6V0C-204ENST00000568562 AMPHP49418 695 aa26.31■■□□□ 1.8
ATP6V0C-204ENST00000568562 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
ATP6V0C-204ENST00000568562 C1QTNF8P60827 252 aa26.28■■□□□ 1.8
ATP6V0C-204ENST00000568562 ZCRB1Q8TBF4 217 aaKnown RBP26.28■■□□□ 1.8
ATP6V0C-204ENST00000568562 NLGN2Q8NFZ4 835 aa26.27■■□□□ 1.8
ATP6V0C-204ENST00000568562 TESK2Q96S53 571 aa26.27■■□□□ 1.8
ATP6V0C-204ENST00000568562 C5P01031 1676 aa26.27■■□□□ 1.8
ATP6V0C-204ENST00000568562 GOLGB1Q14789 3259 aaKnown RBP26.26■■□□□ 1.79
ATP6V0C-204ENST00000568562 CCNL1Q9UK58 526 aaPredicted RBP26.26■■□□□ 1.79
ATP6V0C-204ENST00000568562 RTL1A6NKG5 1358 aa26.25■■□□□ 1.79
ATP6V0C-204ENST00000568562 ST20-MTHFSA0A0A6YYL1 179 aa26.25■■□□□ 1.79
ATP6V0C-204ENST00000568562 KIF20BQ96Q89 1820 aa26.25■■□□□ 1.79
ATP6V0C-204ENST00000568562 TAF1LQ8IZX4 1826 aa26.24■■□□□ 1.79
ATP6V0C-204ENST00000568562 RRS1Q15050 365 aaKnown RBP26.23■■□□□ 1.79
ATP6V0C-204ENST00000568562 USHBP1Q8N6Y0 703 aa26.23■■□□□ 1.79
ATP6V0C-204ENST00000568562 USP47Q96K76 1375 aa26.22■■□□□ 1.79
ATP6V0C-204ENST00000568562 MSH5O43196 834 aa26.22■■□□□ 1.79
ATP6V0C-204ENST00000568562 NBPF6Q5VWK0 638 aa26.2■■□□□ 1.78
ATP6V0C-204ENST00000568562 NBPF4Q96M43 638 aa26.2■■□□□ 1.78
ATP6V0C-204ENST00000568562 SMG6Q86US8 1419 aaKnown RBP26.2■■□□□ 1.78
ATP6V0C-204ENST00000568562 COL23A1Q86Y22 540 aaPredicted RBP26.19■■□□□ 1.78
ATP6V0C-204ENST00000568562 GGNBP2Q9H3C7 697 aa26.19■■□□□ 1.78
ATP6V0C-204ENST00000568562 TOGARAM1Q9Y4F4 1720 aa26.19■■□□□ 1.78
ATP6V0C-204ENST00000568562 ITGB4P16144 1822 aa26.18■■□□□ 1.78
ATP6V0C-204ENST00000568562 GIGYF1O75420 1035 aaPredicted RBP26.18■■□□□ 1.78
ATP6V0C-204ENST00000568562 MSL1Q68DK7 614 aa26.18■■□□□ 1.78
ATP6V0C-204ENST00000568562 RAPGEF4Q8WZA2 1011 aa26.17■■□□□ 1.78
ATP6V0C-204ENST00000568562 YBX3P16989 372 aaKnown RBP eCLIP26.16■■□□□ 1.786e-8■□□□□ 10.9
ATP6V0C-204ENST00000568562 CGNL1Q0VF96 1302 aa26.15■■□□□ 1.78
ATP6V0C-204ENST00000568562 FYB1O15117 783 aa26.14■■□□□ 1.78
ATP6V0C-204ENST00000568562 TATP17735 454 aaPredicted RBP26.14■■□□□ 1.78
ATP6V0C-204ENST00000568562 C4BP0C0L5 1744 aa26.12■■□□□ 1.77
ATP6V0C-204ENST00000568562 PKD1L3Q7Z443 1732 aa26.12■■□□□ 1.77
ATP6V0C-204ENST00000568562 SLC24A1O60721 1099 aa26.12■■□□□ 1.77
ATP6V0C-204ENST00000568562 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
ATP6V0C-204ENST00000568562 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
ATP6V0C-204ENST00000568562 PALLDQ8WX93 1383 aa26.11■■□□□ 1.77
ATP6V0C-204ENST00000568562 UBR3Q6ZT12 1888 aa26.11■■□□□ 1.77
ATP6V0C-204ENST00000568562 INSRP06213 1382 aa26.1■■□□□ 1.77
ATP6V0C-204ENST00000568562 GRIN3BO60391 1043 aa26.1■■□□□ 1.77
ATP6V0C-204ENST00000568562 HSP90AB2PQ58FF8 381 aa26.1■■□□□ 1.77
ATP6V0C-204ENST00000568562 FLT4P35916 1363 aa26.09■■□□□ 1.77
ATP6V0C-204ENST00000568562 TMF1P82094 1093 aa26.08■■□□□ 1.77
ATP6V0C-204ENST00000568562 MPRIPQ6WCQ1 1025 aa26.08■■□□□ 1.77
ATP6V0C-204ENST00000568562 CYP27B1O15528 508 aa26.05■■□□□ 1.76
ATP6V0C-204ENST00000568562 ATP10DQ9P241 1426 aa26.05■■□□□ 1.76
ATP6V0C-204ENST00000568562 ANKRD26Q9UPS8 1709 aa26.04■■□□□ 1.76
ATP6V0C-204ENST00000568562 MAP2P11137 1827 aaKnown RBP26.04■■□□□ 1.76
ATP6V0C-204ENST00000568562 KIF24Q5T7B8 1368 aa26.04■■□□□ 1.76
ATP6V0C-204ENST00000568562 FLAD1Q8NFF5 587 aa26.03■■□□□ 1.76
ATP6V0C-204ENST00000568562 AK7Q96M32 723 aa26.02■■□□□ 1.76
ATP6V0C-204ENST00000568562 CD2APQ9Y5K6 639 aa26.02■■□□□ 1.76
ATP6V0C-204ENST00000568562 AMIGO3Q86WK7 504 aa26.01■■□□□ 1.75
ATP6V0C-204ENST00000568562 EMILIN1Q9Y6C2 1016 aa26.01■■□□□ 1.75
ATP6V0C-204ENST00000568562 PHF14O94880 888 aa26■■□□□ 1.75
ATP6V0C-204ENST00000568562 NSD3Q9BZ95 1437 aa25.99■■□□□ 1.75
ATP6V0C-204ENST00000568562 SMIM5Q71RC9 77 aa25.99■■□□□ 1.75
ATP6V0C-204ENST00000568562 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
ATP6V0C-204ENST00000568562 HMGB2P26583 209 aaKnown RBP25.98■■□□□ 1.75
ATP6V0C-204ENST00000568562 NCAPD2Q15021 1401 aa25.97■■□□□ 1.75
ATP6V0C-204ENST00000568562 WWC3Q9ULE0 1092 aa25.97■■□□□ 1.75
ATP6V0C-204ENST00000568562 PIGBQ92521 554 aa25.96■■□□□ 1.75
ATP6V0C-204ENST00000568562 ADCY9O60503 1353 aa25.95■■□□□ 1.75
ATP6V0C-204ENST00000568562 CARD14Q9BXL6 1004 aa25.95■■□□□ 1.74
ATP6V0C-204ENST00000568562 IGSF1Q8N6C5 1336 aa25.94■■□□□ 1.74
ATP6V0C-204ENST00000568562 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.94■■□□□ 1.74
ATP6V0C-204ENST00000568562 PPM1GO15355 546 aaPredicted RBP25.94■■□□□ 1.74
ATP6V0C-204ENST00000568562 CDCA8Q53HL2 280 aa25.94■■□□□ 1.74
ATP6V0C-204ENST00000568562 GPBP1L1Q9HC44 474 aaPredicted RBP25.93■■□□□ 1.74
ATP6V0C-204ENST00000568562 LINC00116Q8NCU8 138 aa25.92■■□□□ 1.74
ATP6V0C-204ENST00000568562 ZNF526Q8TF50 670 aaPredicted RBP25.92■■□□□ 1.74
ATP6V0C-204ENST00000568562 LOC102724428A0A0B4J2F2 783 aa25.91■■□□□ 1.74
ATP6V0C-204ENST00000568562 SIK1P57059 783 aa25.91■■□□□ 1.74
ATP6V0C-204ENST00000568562 NKX1-1Q15270 411 aaPredicted RBP25.91■■□□□ 1.74
ATP6V0C-204ENST00000568562 SPG7Q9UQ90 795 aa25.91■■□□□ 1.74
ATP6V0C-204ENST00000568562 CEP350Q5VT06 3117 aa25.91■■□□□ 1.74
ATP6V0C-204ENST00000568562 SSFA2P28290 1259 aa25.9■■□□□ 1.74
ATP6V0C-204ENST00000568562 TMOD3Q9NYL9 352 aa25.89■■□□□ 1.74
ATP6V0C-204ENST00000568562 KIF13BQ9NQT8 1826 aa25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 GNPATO15228 680 aa25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 EYA1Q99502 592 aa25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 ASAP1Q9ULH1 1129 aa25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 N4BP2Q86UW6 1770 aaPredicted RBP25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 WASHC2AQ641Q2 1341 aa25.87■■□□□ 1.73
ATP6V0C-204ENST00000568562 KIAA1551Q9HCM1 1747 aa25.86■■□□□ 1.73
ATP6V0C-204ENST00000568562 ITPK1Q13572 414 aa25.86■■□□□ 1.73
ATP6V0C-204ENST00000568562 CICQ96RK0 1608 aaPredicted RBP25.85■■□□□ 1.73
ATP6V0C-204ENST00000568562 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
ATP6V0C-204ENST00000568562 PHKG2P15735 406 aa25.83■■□□□ 1.73
ATP6V0C-204ENST00000568562 IFNL2Q8IZJ0 200 aa25.83■■□□□ 1.73
ATP6V0C-204ENST00000568562 COL5A3P25940 1745 aaPredicted RBP25.83■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms