RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 ZNF428Q96B54 188 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 NLRP2Q9NX02 1062 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 KIAA0232Q92628 1395 aa10.63□□□□□ -0.71
BBS4-214ENST00000568535 PELP1Q8IZL8 1130 aaKnown RBP10.62□□□□□ -0.71
BBS4-214ENST00000568535 USHBP1Q8N6Y0 703 aa10.62□□□□□ -0.71
BBS4-214ENST00000568535 RAPGEF4Q8WZA2 1011 aa10.62□□□□□ -0.71
BBS4-214ENST00000568535 NHSL1Q5SYE7 1610 aa10.62□□□□□ -0.71
BBS4-214ENST00000568535 ZNF853P0CG23 659 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 CANXP27824 592 aaKnown RBP10.61□□□□□ -0.71
BBS4-214ENST00000568535 EVA1CP58658 441 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 IRX6P78412 446 aaPredicted RBP10.61□□□□□ -0.71
BBS4-214ENST00000568535 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
BBS4-214ENST00000568535 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 TSR2Q969E8 191 aaKnown RBP10.61□□□□□ -0.71
BBS4-214ENST00000568535 PPP4R2Q9NY27 417 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 PLEKHG2Q9H7P9 1386 aa10.61□□□□□ -0.71
BBS4-214ENST00000568535 AHDC1Q5TGY3 1603 aaPredicted RBP10.6□□□□□ -0.71
BBS4-214ENST00000568535 MS4A1P11836 297 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 TATP17735 454 aaPredicted RBP10.6□□□□□ -0.71
BBS4-214ENST00000568535 RARSP54136 660 aaKnown RBP10.6□□□□□ -0.71
BBS4-214ENST00000568535 AKAP4Q5JQC9 854 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 IFFO2Q5TF58 517 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 SPG7Q9UQ90 795 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
BBS4-214ENST00000568535 FAM83GA6ND36 823 aa10.59□□□□□ -0.71
BBS4-214ENST00000568535 DCTN1Q14203 1278 aa10.59□□□□□ -0.71
BBS4-214ENST00000568535 MCM10Q7L590 875 aa10.59□□□□□ -0.71
BBS4-214ENST00000568535 THUMPD2Q9BTF0 503 aaKnown RBP10.59□□□□□ -0.71
BBS4-214ENST00000568535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.59□□□□□ -0.714e-6■□□□□ 11.2
BBS4-214ENST00000568535 ROBO1Q9Y6N7 1651 aa10.59□□□□□ -0.71
BBS4-214ENST00000568535 NCAPD2Q15021 1401 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 CHL1O00533 1208 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 ALDH1L2Q3SY69 923 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 TOM1L2Q6ZVM7 507 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 CHMP4AQ9BY43 222 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 MBIPQ9NS73 344 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.72
BBS4-214ENST00000568535 IPO8O15397 1037 aaKnown RBP10.57□□□□□ -0.72
BBS4-214ENST00000568535 PDE3AQ14432 1141 aa10.57□□□□□ -0.72
BBS4-214ENST00000568535 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
BBS4-214ENST00000568535 ZNF530Q6P9A1 599 aaPredicted RBP10.57□□□□□ -0.72
BBS4-214ENST00000568535 TSPYL4Q9UJ04 414 aa10.57□□□□□ -0.72
BBS4-214ENST00000568535 PLIN1O60240 522 aa10.56□□□□□ -0.72
BBS4-214ENST00000568535 BCAR3O75815 825 aa10.56□□□□□ -0.72
BBS4-214ENST00000568535 HSP90AB1P08238 724 aaKnown RBP10.56□□□□□ -0.72
BBS4-214ENST00000568535 CARD10Q9BWT7 1032 aa10.56□□□□□ -0.72
BBS4-214ENST00000568535 SMC4Q9NTJ3 1288 aa10.56□□□□□ -0.72
BBS4-214ENST00000568535 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
BBS4-214ENST00000568535 CRYBG1Q9Y4K1 1723 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 TEFQ10587 303 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 TWISTNBQ3B726 338 aaPredicted RBP10.55□□□□□ -0.72
BBS4-214ENST00000568535 ZKSCAN2Q63HK3 967 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 IFNL2Q8IZJ0 200 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 IL17REQ8NFR9 667 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 FRAT1Q92837 279 aaPredicted RBP10.55□□□□□ -0.72
BBS4-214ENST00000568535 CRB1P82279 1406 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 KIF16BQ96L93 1317 aa10.55□□□□□ -0.72
BBS4-214ENST00000568535 COL18A1P39060 1754 aa10.54□□□□□ -0.72
BBS4-214ENST00000568535 FAM208AQ9UK61 1670 aaKnown RBP10.54□□□□□ -0.72
BBS4-214ENST00000568535 VAMP4O75379 141 aa10.54□□□□□ -0.72
BBS4-214ENST00000568535 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
BBS4-214ENST00000568535 AAMPQ13685 434 aa10.54□□□□□ -0.72
BBS4-214ENST00000568535 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
BBS4-214ENST00000568535 BTG4Q9NY30 223 aa10.54□□□□□ -0.72
BBS4-214ENST00000568535 OVOS2A0A0G2JMS6 1433 aa10.53□□□□□ -0.72
BBS4-214ENST00000568535 IL2RBP14784 551 aa10.53□□□□□ -0.72
BBS4-214ENST00000568535 FTSJ3Q8IY81 847 aaKnown RBP10.53□□□□□ -0.72
BBS4-214ENST00000568535 SSH1Q8WYL5 1049 aa10.53□□□□□ -0.72
BBS4-214ENST00000568535 CCDC136Q96JN2 1154 aa10.53□□□□□ -0.72
BBS4-214ENST00000568535 COL5A2P05997 1499 aaPredicted RBP10.53□□□□□ -0.72
BBS4-214ENST00000568535 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
BBS4-214ENST00000568535 CEMIPQ8WUJ3 1361 aa10.52□□□□□ -0.72
BBS4-214ENST00000568535 COL22A1Q8NFW1 1626 aaPredicted RBP10.52□□□□□ -0.73
BBS4-214ENST00000568535 ELL2O00472 640 aaPredicted RBP10.52□□□□□ -0.73
BBS4-214ENST00000568535 RNMTO43148 476 aaKnown RBP10.52□□□□□ -0.73
BBS4-214ENST00000568535 MPRIPQ6WCQ1 1025 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 C8orf58Q8NAV2 365 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 EXOC6Q8TAG9 804 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 ZCRB1Q8TBF4 217 aaKnown RBP10.52□□□□□ -0.73
BBS4-214ENST00000568535 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 CRBNQ96SW2 442 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 LMO7Q8WWI1 1683 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 PHLPP1O60346 1717 aa10.52□□□□□ -0.73
BBS4-214ENST00000568535 DLG5Q8TDM6 1919 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 BTBD11A6QL63 1104 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 PHKG2P15735 406 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
BBS4-214ENST00000568535 ATF7IPQ6VMQ6 1270 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 DCAF5Q96JK2 942 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 BCL2L13Q9BXK5 485 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 CHMP4BQ9H444 224 aaKnown RBP10.51□□□□□ -0.73
BBS4-214ENST00000568535 LGR6Q9HBX8 967 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 MIS18AQ9NYP9 233 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 NOB1Q9ULX3 412 aaKnown RBP10.51□□□□□ -0.73
BBS4-214ENST00000568535 JCADQ9P266 1359 aa10.51□□□□□ -0.73
BBS4-214ENST00000568535 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
BBS4-214ENST00000568535 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms