RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 PIK3C2AO00443 1686 aa8.19□□□□□ -1.1
GINS3-210ENST00000568468 L3MBTL3Q96JM7 780 aaPredicted RBP8.19□□□□□ -1.1
GINS3-210ENST00000568468 EMILIN1Q9Y6C2 1016 aa8.19□□□□□ -1.1
GINS3-210ENST00000568468 OVOS2A0A0J9YW53 1432 aa8.19□□□□□ -1.1
GINS3-210ENST00000568468 OVOS2Q6IE36 1432 aa8.19□□□□□ -1.1
GINS3-210ENST00000568468 TRPM3Q9HCF6 1732 aaPredicted RBP8.18□□□□□ -1.1
GINS3-210ENST00000568468 KIF20BQ96Q89 1820 aa8.18□□□□□ -1.1
GINS3-210ENST00000568468 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
GINS3-210ENST00000568468 MTHFSP49914 203 aa8.18□□□□□ -1.1
GINS3-210ENST00000568468 NLRP13Q86W25 1043 aa8.18□□□□□ -1.1
GINS3-210ENST00000568468 TMEM121BQ9BXQ6 578 aaPredicted RBP8.18□□□□□ -1.1
GINS3-210ENST00000568468 USP31Q70CQ4 1352 aa8.18□□□□□ -1.1
GINS3-210ENST00000568468 CCER2I3L3R5 266 aa8.17□□□□□ -1.1
GINS3-210ENST00000568468 YTHDC1Q96MU7 727 aaKnown RBP8.17□□□□□ -1.1
GINS3-210ENST00000568468 POLKQ9UBT6 870 aa8.17□□□□□ -1.1
GINS3-210ENST00000568468 RGS17Q9UGC6 210 aaPredicted RBP8.17□□□□□ -1.1
GINS3-210ENST00000568468 NUTM2BA6NNL0 878 aaPredicted RBP8.16□□□□□ -1.1
GINS3-210ENST00000568468 NUTM2EB1AL46 878 aaPredicted RBP8.16□□□□□ -1.1
GINS3-210ENST00000568468 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 BRD4O60885 1362 aaPredicted RBP8.16□□□□□ -1.1
GINS3-210ENST00000568468 PPP1R37O75864 691 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 ZC3H6P61129 1189 aaKnown RBP8.16□□□□□ -1.1
GINS3-210ENST00000568468 MAP3K19Q56UN5 1328 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 C3orf67Q6ZVT6 689 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 NUTM2AQ8IVF1 878 aaPredicted RBP8.16□□□□□ -1.1
GINS3-210ENST00000568468 FAM9BQ8IZU0 186 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 ALS2Q96Q42 1657 aa8.16□□□□□ -1.1
GINS3-210ENST00000568468 USP19O94966 1318 aa8.15□□□□□ -1.1
GINS3-210ENST00000568468 G3V3G9 751 aa8.15□□□□□ -1.1
GINS3-210ENST00000568468 GCP02774 474 aa8.15□□□□□ -1.1
GINS3-210ENST00000568468 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.15□□□□□ -1.1
GINS3-210ENST00000568468 ANKRD26Q9UPS8 1709 aa8.15□□□□□ -1.11
GINS3-210ENST00000568468 AMPHP49418 695 aa8.14□□□□□ -1.11
GINS3-210ENST00000568468 HAP1P54257 671 aaPredicted RBP8.14□□□□□ -1.11
GINS3-210ENST00000568468 CHRNA2Q15822 529 aa8.14□□□□□ -1.11
GINS3-210ENST00000568468 SLAIN1Q8ND83 568 aa8.14□□□□□ -1.11
GINS3-210ENST00000568468 LTV1Q96GA3 475 aaPredicted RBP8.14□□□□□ -1.11
GINS3-210ENST00000568468 MARF1Q9Y4F3 1742 aaKnown RBP8.14□□□□□ -1.11
GINS3-210ENST00000568468 AATKQ6ZMQ8 1374 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 ABCA3Q99758 1704 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 ADAMTS2O95450 1211 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 HSP90AB2PQ58FF8 381 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 MEX3CQ5U5Q3 659 aaKnown RBP8.13□□□□□ -1.11
GINS3-210ENST00000568468 ILDR2Q71H61 639 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 CFAP53Q96M91 514 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 SLIT3O75094 1523 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 NFAT5O94916 1531 aa8.13□□□□□ -1.11
GINS3-210ENST00000568468 CRYBG1Q9Y4K1 1723 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 AFF2P51816 1311 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 U2SURPO15042 1029 aaKnown RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 HOXC9P31274 260 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 POTEAQ6S8J7 498 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 FNBP4Q8N3X1 1017 aaPredicted RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 KCNH5Q8NCM2 988 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 PNISRQ8TF01 805 aaKnown RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 RYDENQ9NUL5 291 aaKnown RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
GINS3-210ENST00000568468 SMG6Q86US8 1419 aaKnown RBP8.12□□□□□ -1.11
GINS3-210ENST00000568468 KIAA0232Q92628 1395 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 DIAPH1O60610 1272 aaKnown RBP8.11□□□□□ -1.11
GINS3-210ENST00000568468 EIF4A2Q14240 407 aaKnown RBP8.11□□□□□ -1.11
GINS3-210ENST00000568468 WDR43Q15061 677 aaKnown RBP eCLIP8.11□□□□□ -1.11
GINS3-210ENST00000568468 ZNF772Q68DY9 489 aaPredicted RBP8.11□□□□□ -1.11
GINS3-210ENST00000568468 ARHGEF25Q86VW2 580 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 CCDC146Q8IYE0 955 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 C8orf37Q96NL8 207 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 ADAMTS8Q9UP79 889 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 SLIT2O94813 1529 aa8.11□□□□□ -1.11
GINS3-210ENST00000568468 HMOX1P09601 288 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
GINS3-210ENST00000568468 IL13P35225 146 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 U2AF1Q01081 240 aaKnown RBP eCLIP8.1□□□□□ -1.11
GINS3-210ENST00000568468 USHBP1Q8N6Y0 703 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 SPRYD3Q8NCJ5 442 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.1□□□□□ -1.11
GINS3-210ENST00000568468 BCL9LQ86UU0 1499 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 CDK12Q9NYV4 1490 aaPredicted RBP8.1□□□□□ -1.11
GINS3-210ENST00000568468 USP54Q70EL1 1684 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 PHRF1Q9P1Y6 1649 aaKnown RBP8.1□□□□□ -1.11
GINS3-210ENST00000568468 FLT4P35916 1363 aa8.1□□□□□ -1.11
GINS3-210ENST00000568468 IP6K1Q92551 441 aa8.09□□□□□ -1.11
GINS3-210ENST00000568468 NGLY1Q96IV0 654 aa8.09□□□□□ -1.11
GINS3-210ENST00000568468 SALL2Q9Y467 1007 aaPredicted RBP8.09□□□□□ -1.11
GINS3-210ENST00000568468 ATRNO75882 1429 aa8.09□□□□□ -1.11
GINS3-210ENST00000568468 FAM83GA6ND36 823 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 AEBP1Q8IUX7 1158 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 MICALL2Q8IY33 904 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 ANKRD24Q8TF21 1146 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 USP21Q9UK80 565 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 NUDCQ9Y266 331 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 RTL1A6NKG5 1358 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 INSRP06213 1382 aa8.08□□□□□ -1.12
GINS3-210ENST00000568468 CSB-PGBD3P0DP91 1061 aa8.07□□□□□ -1.12
GINS3-210ENST00000568468 HNRNPUQ00839 825 aaKnown RBP eCLIP8.07□□□□□ -1.12
GINS3-210ENST00000568468 EYA1Q99502 592 aa8.07□□□□□ -1.12
GINS3-210ENST00000568468 STRN4Q9NRL3 753 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms