RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 ANP32CO43423 234 aa11.73□□□□□ -0.53
KLHDC4-220ENST00000568338 USP19O94966 1318 aa11.73□□□□□ -0.53
KLHDC4-220ENST00000568338 TOM1L2Q6ZVM7 507 aa11.73□□□□□ -0.53
KLHDC4-220ENST00000568338 BCL9O00512 1426 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 POLR3AO14802 1390 aaPredicted RBP11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 ANKRD36BQ8N2N9 1353 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 ACEP12821 1306 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 GCP02774 474 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 NLRP13Q86W25 1043 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 TMC1Q8TDI8 760 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 PANK3Q9H999 370 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 SHANK3Q9BYB0 1731 aa11.72□□□□□ -0.53
KLHDC4-220ENST00000568338 AATKQ6ZMQ8 1374 aa11.71□□□□□ -0.53
KLHDC4-220ENST00000568338 MARCH10Q8NA82 808 aaPredicted RBP11.71□□□□□ -0.53
KLHDC4-220ENST00000568338 CDCA7Q9BWT1 371 aaPredicted RBP11.71□□□□□ -0.53
KLHDC4-220ENST00000568338 PPIP5K1Q6PFW1 1433 aa11.7□□□□□ -0.54
KLHDC4-220ENST00000568338 AKAP12Q02952 1782 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 POLD1P28340 1107 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 MIER1Q8N108 512 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 SLC12A5Q9H2X9 1139 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 TERF2IPQ9NYB0 399 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 KNSTRNQ9Y448 316 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 MON2Q7Z3U7 1717 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 NSD3Q9BZ95 1437 aa11.69□□□□□ -0.54
KLHDC4-220ENST00000568338 A0A1W2PP64 1363 aa11.68□□□□□ -0.54
KLHDC4-220ENST00000568338 KTN1Q86UP2 1357 aaKnown RBP11.68□□□□□ -0.54
KLHDC4-220ENST00000568338 PER1O15534 1290 aaPredicted RBP11.68□□□□□ -0.54
KLHDC4-220ENST00000568338 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
KLHDC4-220ENST00000568338 CD163L1Q9NR16 1453 aa11.68□□□□□ -0.54
KLHDC4-220ENST00000568338 NPC1L1Q9UHC9 1359 aa11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 WDR17Q8IZU2 1322 aa11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 GRIN3BO60391 1043 aa11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 HSPA6P17066 643 aa11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 HDGFL2Q7Z4V5 671 aaPredicted RBP11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 ATP10DQ9P241 1426 aa11.67□□□□□ -0.54
KLHDC4-220ENST00000568338 KIF20BQ96Q89 1820 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 WNK3Q9BYP7 1800 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 PLEKHG3A1L390 1219 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 EXOC5O00471 708 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 PRKRIP1Q9H875 184 aaPredicted RBP11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 GPBP1L1Q9HC44 474 aaPredicted RBP11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 CABP1Q9NZU7 370 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 FBXO3Q9UK99 471 aa11.66□□□□□ -0.54
KLHDC4-220ENST00000568338 PAPPAQ13219 1627 aa11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 CSB-PGBD3P0DP91 1061 aa11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 SLC16A10Q8TF71 515 aa11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 CARD14Q9BXL6 1004 aa11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 CPSF1Q10570 1443 aaKnown RBP11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 ANKRD26Q9UPS8 1709 aa11.65□□□□□ -0.54
KLHDC4-220ENST00000568338 NSD2O96028 1365 aa11.65□□□□□ -0.55
KLHDC4-220ENST00000568338 TNS2Q63HR2 1409 aa11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 EDC4Q6P2E9 1401 aaKnown RBP11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 RALBP1Q15311 655 aa11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 ZNF827Q17R98 1081 aa11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 NLGN2Q8NFZ4 835 aa11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 NHSQ6T4R5 1651 aa11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 BRD4O60885 1362 aaPredicted RBP11.64□□□□□ -0.55
KLHDC4-220ENST00000568338 CGNL1Q0VF96 1302 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 NLRP6P59044 892 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 ACSBG1Q96GR2 724 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 SLIT3O75094 1523 aa11.63□□□□□ -0.55
KLHDC4-220ENST00000568338 YBX3P16989 372 aaKnown RBP eCLIP11.62□□□□□ -0.55
KLHDC4-220ENST00000568338 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
KLHDC4-220ENST00000568338 CARD10Q9BWT7 1032 aa11.62□□□□□ -0.55
KLHDC4-220ENST00000568338 USP6P35125 1406 aa11.61□□□□□ -0.55
KLHDC4-220ENST00000568338 CNGB1Q14028 1251 aaPredicted RBP11.61□□□□□ -0.55
KLHDC4-220ENST00000568338 ZNF526Q8TF50 670 aaPredicted RBP11.61□□□□□ -0.55
KLHDC4-220ENST00000568338 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
KLHDC4-220ENST00000568338 MYBBP1AQ9BQG0 1328 aaKnown RBP11.6□□□□□ -0.55
KLHDC4-220ENST00000568338 ABCC6O95255 1503 aa11.6□□□□□ -0.55
KLHDC4-220ENST00000568338 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
KLHDC4-220ENST00000568338 SLC27A3Q5K4L6 730 aa11.58□□□□□ -0.56
KLHDC4-220ENST00000568338 ZNF579Q8NAF0 562 aaKnown RBP11.58□□□□□ -0.56
KLHDC4-220ENST00000568338 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
KLHDC4-220ENST00000568338 PNPLA7Q6ZV29 1317 aa11.58□□□□□ -0.56
KLHDC4-220ENST00000568338 COL18A1P39060 1754 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 SOX12O15370 315 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 GABBR2O75899 941 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 APLP1P51693 650 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 KCNH5Q8NCM2 988 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 TTC21AQ8NDW8 1320 aa11.57□□□□□ -0.56
KLHDC4-220ENST00000568338 ADCY9O60503 1353 aa11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 USP54Q70EL1 1684 aa11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 QSER1Q2KHR3 1735 aa11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 MORC1Q86VD1 984 aa11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 ARHGEF25Q86VW2 580 aa11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.56□□□□□ -0.56
KLHDC4-220ENST00000568338 PIK3C2AO00443 1686 aa11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 FYB1O15117 783 aa11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 VASPP50552 380 aaPredicted RBP11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 BTAF1O14981 1849 aa11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 TTC21BQ7Z4L5 1316 aa11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
KLHDC4-220ENST00000568338 GGNBP2Q9H3C7 697 aa11.54□□□□□ -0.56
KLHDC4-220ENST00000568338 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms