RNA–Protein interactions for RNA: ENST00000568283.5

NUP93-216, Transcript of nucleoporin 93, humanhuman

TSL 4

Gene NUP93, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-216ENST00000568283 USP35Q9P2H5 1018 aa13.59□□□□□ -0.23
NUP93-216ENST00000568283 RGPD2P0DJD1 1756 aa13.58□□□□□ -0.23
NUP93-216ENST00000568283 RXRBP28702 533 aa13.58□□□□□ -0.24
NUP93-216ENST00000568283 ONECUT3O60422 494 aaPredicted RBP13.57□□□□□ -0.24
NUP93-216ENST00000568283 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
NUP93-216ENST00000568283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.57□□□□□ -0.24
NUP93-216ENST00000568283 HMOX1P09601 288 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 CCDC184Q52MB2 194 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 PLEKHO1Q53GL0 409 aaPredicted RBP13.56□□□□□ -0.24
NUP93-216ENST00000568283 POTEAQ6S8J7 498 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 ADAMTS8Q9UP79 889 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 SPG7Q9UQ90 795 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 MAPK8IP3Q9UPT6 1336 aa13.56□□□□□ -0.24
NUP93-216ENST00000568283 EXOC5O00471 708 aa13.55□□□□□ -0.24
NUP93-216ENST00000568283 RSPH6AQ9H0K4 717 aa13.55□□□□□ -0.24
NUP93-216ENST00000568283 PARP4Q9UKK3 1724 aaKnown RBP13.55□□□□□ -0.24
NUP93-216ENST00000568283 FAM98CQ17RN3 349 aaKnown RBP13.54□□□□□ -0.24
NUP93-216ENST00000568283 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
NUP93-216ENST00000568283 RUNDC1Q96C34 613 aa13.54□□□□□ -0.24
NUP93-216ENST00000568283 A0A0G2JS52 829 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 PRKAR2BP31323 418 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 MYT1Q01538 1121 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 DDB1Q16531 1140 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 AEBP1Q8IUX7 1158 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
NUP93-216ENST00000568283 OVOS2A0A0G2JMS6 1433 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 GLI3P10071 1580 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 WNK3Q9BYP7 1800 aa13.53□□□□□ -0.24
NUP93-216ENST00000568283 DISP2A7MBM2 1401 aa13.52□□□□□ -0.25
NUP93-216ENST00000568283 PDE3BQ13370 1112 aa13.51□□□□□ -0.25
NUP93-216ENST00000568283 NGEFQ8N5V2 710 aa13.51□□□□□ -0.25
NUP93-216ENST00000568283 PLEKHF1Q96S99 279 aa13.51□□□□□ -0.25
NUP93-216ENST00000568283 MEGF6O75095 1541 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 HSP90AB1P08238 724 aaKnown RBP13.5□□□□□ -0.25
NUP93-216ENST00000568283 C1orf141Q5JVX7 400 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 SEPT12Q8IYM1 358 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
NUP93-216ENST00000568283 THSD7AQ9UPZ6 1657 aa13.49□□□□□ -0.25
NUP93-216ENST00000568283 TNS2Q63HR2 1409 aa13.48□□□□□ -0.25
NUP93-216ENST00000568283 PKD1L3Q7Z443 1732 aa13.48□□□□□ -0.25
NUP93-216ENST00000568283 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
NUP93-216ENST00000568283 LMOD3Q0VAK6 560 aa13.48□□□□□ -0.25
NUP93-216ENST00000568283 AKAP4Q5JQC9 854 aa13.48□□□□□ -0.25
NUP93-216ENST00000568283 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
NUP93-216ENST00000568283 NFE2L2Q16236 605 aa13.47□□□□□ -0.25
NUP93-216ENST00000568283 MTHFSDQ2M296 383 aaKnown RBP13.47□□□□□ -0.25
NUP93-216ENST00000568283 CCDC146Q8IYE0 955 aa13.47□□□□□ -0.25
NUP93-216ENST00000568283 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
NUP93-216ENST00000568283 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
NUP93-216ENST00000568283 KRT27Q7Z3Y8 459 aa13.46□□□□□ -0.25
NUP93-216ENST00000568283 DDX54Q8TDD1 881 aaKnown RBP13.46□□□□□ -0.25
NUP93-216ENST00000568283 RTF1Q92541 710 aaKnown RBP13.46□□□□□ -0.25
NUP93-216ENST00000568283 LRRC37A3O60309 1634 aa13.46□□□□□ -0.26
NUP93-216ENST00000568283 PHKG2P15735 406 aa13.45□□□□□ -0.26
NUP93-216ENST00000568283 TMPOP42166 694 aaKnown RBP13.45□□□□□ -0.26
NUP93-216ENST00000568283 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
NUP93-216ENST00000568283 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
NUP93-216ENST00000568283 APAF1O14727 1248 aa13.44□□□□□ -0.26
NUP93-216ENST00000568283 CYP27B1O15528 508 aa13.44□□□□□ -0.26
NUP93-216ENST00000568283 RIPK4P57078 832 aa13.44□□□□□ -0.26
NUP93-216ENST00000568283 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
NUP93-216ENST00000568283 CALD1Q05682 793 aaKnown RBP13.43□□□□□ -0.26
NUP93-216ENST00000568283 FAM196AQ6ZSG2 479 aa13.43□□□□□ -0.26
NUP93-216ENST00000568283 BCL9O00512 1426 aa13.42□□□□□ -0.26
NUP93-216ENST00000568283 RGS12O14924 1447 aa13.42□□□□□ -0.26
NUP93-216ENST00000568283 ERVV-2B6SEH9 535 aa13.42□□□□□ -0.26
NUP93-216ENST00000568283 CCDC27Q2M243 656 aa13.42□□□□□ -0.26
NUP93-216ENST00000568283 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
NUP93-216ENST00000568283 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
NUP93-216ENST00000568283 BRWD3Q6RI45 1802 aa13.41□□□□□ -0.26
NUP93-216ENST00000568283 NEUROD2Q15784 382 aa13.41□□□□□ -0.26
NUP93-216ENST00000568283 EP400Q96L91 3159 aa13.4□□□□□ -0.26
NUP93-216ENST00000568283 DLG5Q8TDM6 1919 aa13.4□□□□□ -0.26
NUP93-216ENST00000568283 RNMTO43148 476 aaKnown RBP13.39□□□□□ -0.27
NUP93-216ENST00000568283 TEFQ10587 303 aa13.39□□□□□ -0.27
NUP93-216ENST00000568283 MPRIPQ6WCQ1 1025 aa13.39□□□□□ -0.27
NUP93-216ENST00000568283 KAT6BQ8WYB5 2073 aa13.39□□□□□ -0.27
NUP93-216ENST00000568283 CABP4P57796 275 aa13.38□□□□□ -0.27
NUP93-216ENST00000568283 RRP7AQ9Y3A4 280 aaKnown RBP13.38□□□□□ -0.27
NUP93-216ENST00000568283 SCN11AQ9UI33 1791 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 CEMIPQ8WUJ3 1361 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 WDR63Q8IWG1 891 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 TMOD3Q9NYL9 352 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
NUP93-216ENST00000568283 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
NUP93-216ENST00000568283 HNRNPUQ00839 825 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP93-216ENST00000568283 MCM10Q7L590 875 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 WWC1Q8IX03 1113 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 UPF1Q92900 1129 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP93-216ENST00000568283 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 ADAMTS7Q9UKP4 1686 aa13.36□□□□□ -0.27
NUP93-216ENST00000568283 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms