RNA–Protein interactions for RNA: ENST00000568235.5

ACSM3-213, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 4

Gene ACSM3, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-213ENST00000568235 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
ACSM3-213ENST00000568235 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
ACSM3-213ENST00000568235 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
ACSM3-213ENST00000568235 AKT1S1Q96B36 256 aa17■□□□□ 0.31
ACSM3-213ENST00000568235 NBPF4Q96M43 638 aa17■□□□□ 0.31
ACSM3-213ENST00000568235 UTRNP46939 3433 aa17■□□□□ 0.31
ACSM3-213ENST00000568235 NSD2O96028 1365 aa17■□□□□ 0.31
ACSM3-213ENST00000568235 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
ACSM3-213ENST00000568235 SLC27A3Q5K4L6 730 aa16.99■□□□□ 0.31
ACSM3-213ENST00000568235 ARXQ96QS3 562 aa16.99■□□□□ 0.31
ACSM3-213ENST00000568235 KIF20BQ96Q89 1820 aa16.98■□□□□ 0.31
ACSM3-213ENST00000568235 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
ACSM3-213ENST00000568235 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.31
ACSM3-213ENST00000568235 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
ACSM3-213ENST00000568235 TFCP2L1Q9NZI6 479 aa16.96■□□□□ 0.31
ACSM3-213ENST00000568235 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
ACSM3-213ENST00000568235 RAPGEF4Q8WZA2 1011 aa16.95■□□□□ 0.3
ACSM3-213ENST00000568235 LY75O60449 1722 aa16.95■□□□□ 0.3
ACSM3-213ENST00000568235 QSER1Q2KHR3 1735 aa16.95■□□□□ 0.3
ACSM3-213ENST00000568235 INSRP06213 1382 aa16.94■□□□□ 0.3
ACSM3-213ENST00000568235 CDCA8Q53HL2 280 aa16.94■□□□□ 0.3
ACSM3-213ENST00000568235 KLHL34Q8N239 644 aa16.94■□□□□ 0.3
ACSM3-213ENST00000568235 CCNL1Q9UK58 526 aaPredicted RBP16.94■□□□□ 0.3
ACSM3-213ENST00000568235 FLT4P35916 1363 aa16.93■□□□□ 0.3
ACSM3-213ENST00000568235 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
ACSM3-213ENST00000568235 CARD14Q9BXL6 1004 aa16.93■□□□□ 0.3
ACSM3-213ENST00000568235 NSD3Q9BZ95 1437 aa16.93■□□□□ 0.3
ACSM3-213ENST00000568235 CGNL1Q0VF96 1302 aa16.93■□□□□ 0.3
ACSM3-213ENST00000568235 MAP3K5Q99683 1374 aa16.92■□□□□ 0.3
ACSM3-213ENST00000568235 SLC16A10Q8TF71 515 aa16.92■□□□□ 0.3
ACSM3-213ENST00000568235 EMILIN1Q9Y6C2 1016 aa16.92■□□□□ 0.3
ACSM3-213ENST00000568235 POLD1P28340 1107 aa16.91■□□□□ 0.3
ACSM3-213ENST00000568235 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
ACSM3-213ENST00000568235 PCDH11XQ9BZA7 1347 aa16.9■□□□□ 0.3
ACSM3-213ENST00000568235 PCDH11YQ9BZA8 1340 aa16.9■□□□□ 0.3
ACSM3-213ENST00000568235 MSH5O43196 834 aa16.89■□□□□ 0.29
ACSM3-213ENST00000568235 COL24A1Q17RW2 1714 aa16.89■□□□□ 0.29
ACSM3-213ENST00000568235 KIF24Q5T7B8 1368 aa16.89■□□□□ 0.29
ACSM3-213ENST00000568235 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
ACSM3-213ENST00000568235 GPR162Q16538 588 aa16.88■□□□□ 0.29
ACSM3-213ENST00000568235 CHD4Q14839 1912 aa16.88■□□□□ 0.29
ACSM3-213ENST00000568235 CYP27B1O15528 508 aa16.87■□□□□ 0.29
ACSM3-213ENST00000568235 MPRIPQ6WCQ1 1025 aa16.87■□□□□ 0.29
ACSM3-213ENST00000568235 COL23A1Q86Y22 540 aaPredicted RBP16.87■□□□□ 0.29
ACSM3-213ENST00000568235 PELP1Q8IZL8 1130 aaKnown RBP16.87■□□□□ 0.29
ACSM3-213ENST00000568235 C5P01031 1676 aa16.86■□□□□ 0.29
ACSM3-213ENST00000568235 NLGN2Q8NFZ4 835 aa16.86■□□□□ 0.29
ACSM3-213ENST00000568235 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
ACSM3-213ENST00000568235 PALLDQ8WX93 1383 aa16.86■□□□□ 0.29
ACSM3-213ENST00000568235 MSL1Q68DK7 614 aa16.85■□□□□ 0.29
ACSM3-213ENST00000568235 POLR3GLQ9BT43 218 aa16.85■□□□□ 0.29
ACSM3-213ENST00000568235 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
ACSM3-213ENST00000568235 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
ACSM3-213ENST00000568235 GOLGB1Q14789 3259 aaKnown RBP16.83■□□□□ 0.29
ACSM3-213ENST00000568235 ITGB4P16144 1822 aa16.83■□□□□ 0.28
ACSM3-213ENST00000568235 NCAPD2Q15021 1401 aa16.83■□□□□ 0.28
ACSM3-213ENST00000568235 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
ACSM3-213ENST00000568235 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
ACSM3-213ENST00000568235 TAF1LQ8IZX4 1826 aa16.82■□□□□ 0.28
ACSM3-213ENST00000568235 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
ACSM3-213ENST00000568235 TNNT2P45379 298 aaPredicted RBP16.81■□□□□ 0.28
ACSM3-213ENST00000568235 PIGBQ92521 554 aa16.81■□□□□ 0.28
ACSM3-213ENST00000568235 EYA1Q99502 592 aa16.81■□□□□ 0.28
ACSM3-213ENST00000568235 MAP2P11137 1827 aaKnown RBP16.81■□□□□ 0.28
ACSM3-213ENST00000568235 POLKQ9UBT6 870 aa16.8■□□□□ 0.28
ACSM3-213ENST00000568235 SPG7Q9UQ90 795 aa16.8■□□□□ 0.28
ACSM3-213ENST00000568235 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
ACSM3-213ENST00000568235 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
ACSM3-213ENST00000568235 AMIGO3Q86WK7 504 aa16.79■□□□□ 0.28
ACSM3-213ENST00000568235 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
ACSM3-213ENST00000568235 YBX3P16989 372 aaKnown RBP eCLIP16.78■□□□□ 0.281e-13■■□□□ 14.1
ACSM3-213ENST00000568235 NKX1-1Q15270 411 aaPredicted RBP16.78■□□□□ 0.28
ACSM3-213ENST00000568235 AK7Q96M32 723 aa16.78■□□□□ 0.28
ACSM3-213ENST00000568235 PHF14O94880 888 aa16.77■□□□□ 0.28
ACSM3-213ENST00000568235 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
ACSM3-213ENST00000568235 CLSPNQ9HAW4 1339 aa16.76■□□□□ 0.27
ACSM3-213ENST00000568235 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
ACSM3-213ENST00000568235 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
ACSM3-213ENST00000568235 LOC102724428A0A0B4J2F2 783 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 PHKG2P15735 406 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 SIK1P57059 783 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 ASAP1Q9ULH1 1129 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 UBR3Q6ZT12 1888 aa16.75■□□□□ 0.27
ACSM3-213ENST00000568235 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.74■□□□□ 0.27
ACSM3-213ENST00000568235 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
ACSM3-213ENST00000568235 HMGB2P26583 209 aaKnown RBP16.74■□□□□ 0.27
ACSM3-213ENST00000568235 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
ACSM3-213ENST00000568235 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.74■□□□□ 0.271e-6■■■■□ 22.8
ACSM3-213ENST00000568235 GRIN3BO60391 1043 aa16.72■□□□□ 0.27
ACSM3-213ENST00000568235 C1QTNF8P60827 252 aa16.72■□□□□ 0.27
ACSM3-213ENST00000568235 EIF4G2P78344 907 aaKnown RBP eCLIP16.72■□□□□ 0.272e-10■□□□□ 11
ACSM3-213ENST00000568235 ITPK1Q13572 414 aa16.72■□□□□ 0.27
ACSM3-213ENST00000568235 PANK3Q9H999 370 aa16.72■□□□□ 0.27
ACSM3-213ENST00000568235 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
ACSM3-213ENST00000568235 SENP3-EIF4A1A0A087X0R7 540 aa16.7■□□□□ 0.26
ACSM3-213ENST00000568235 GNPATO15228 680 aa16.7■□□□□ 0.26
ACSM3-213ENST00000568235 SSFA2P28290 1259 aa16.7■□□□□ 0.26
ACSM3-213ENST00000568235 ATP6V1AP38606 617 aa16.7■□□□□ 0.26
ACSM3-213ENST00000568235 ATG3Q9NT62 314 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms