RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-238ENST00000568169 ANKRD36BQ8N2N9 1353 aa16.14■□□□□ 0.17
TCF4-238ENST00000568169 POLD1P28340 1107 aa16.14■□□□□ 0.17
TCF4-238ENST00000568169 PRIM1P49642 420 aaKnown RBP16.14■□□□□ 0.17
TCF4-238ENST00000568169 LTV1Q96GA3 475 aaPredicted RBP16.14■□□□□ 0.17
TCF4-238ENST00000568169 SENP3-EIF4A1A0A087X0R7 540 aa16.13■□□□□ 0.17
TCF4-238ENST00000568169 KCNQ4P56696 695 aa16.13■□□□□ 0.17
TCF4-238ENST00000568169 TFCP2L1Q9NZI6 479 aa16.13■□□□□ 0.17
TCF4-238ENST00000568169 MAP3K19Q56UN5 1328 aa16.13■□□□□ 0.17
TCF4-238ENST00000568169 NSD2O96028 1365 aa16.13■□□□□ 0.17
TCF4-238ENST00000568169 KLHL34Q8N239 644 aa16.12■□□□□ 0.17
TCF4-238ENST00000568169 SYTL4Q96C24 671 aaPredicted RBP16.12■□□□□ 0.17
TCF4-238ENST00000568169 HOXC9P31274 260 aa16.11■□□□□ 0.17
TCF4-238ENST00000568169 ZCRB1Q8TBF4 217 aaKnown RBP16.11■□□□□ 0.17
TCF4-238ENST00000568169 TAF1LQ8IZX4 1826 aa16.1■□□□□ 0.17
TCF4-238ENST00000568169 COG3Q96JB2 828 aa16.1■□□□□ 0.17
TCF4-238ENST00000568169 MEGF6O75095 1541 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 FBLN1P23142 703 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 AMPHP49418 695 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 NLGN2Q8NFZ4 835 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 TESK2Q96S53 571 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 UTRNP46939 3433 aa16.09■□□□□ 0.17
TCF4-238ENST00000568169 C5P01031 1676 aa16.08■□□□□ 0.17
TCF4-238ENST00000568169 PELP1Q8IZL8 1130 aaKnown RBP16.08■□□□□ 0.16
TCF4-238ENST00000568169 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
TCF4-238ENST00000568169 COL23A1Q86Y22 540 aaPredicted RBP16.07■□□□□ 0.16
TCF4-238ENST00000568169 ITGB4P16144 1822 aa16.07■□□□□ 0.16
TCF4-238ENST00000568169 RTL1A6NKG5 1358 aa16.06■□□□□ 0.16
TCF4-238ENST00000568169 GIGYF1O75420 1035 aaPredicted RBP16.06■□□□□ 0.16
TCF4-238ENST00000568169 USP47Q96K76 1375 aa16.05■□□□□ 0.16
TCF4-238ENST00000568169 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
TCF4-238ENST00000568169 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
TCF4-238ENST00000568169 NBPF6Q5VWK0 638 aa16.05■□□□□ 0.16
TCF4-238ENST00000568169 NBPF4Q96M43 638 aa16.05■□□□□ 0.16
TCF4-238ENST00000568169 TONSLQ96HA7 1378 aa16.04■□□□□ 0.16
TCF4-238ENST00000568169 ST20-MTHFSA0A0A6YYL1 179 aa16.04■□□□□ 0.16
TCF4-238ENST00000568169 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
TCF4-238ENST00000568169 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
TCF4-238ENST00000568169 KIF20BQ96Q89 1820 aa16.03■□□□□ 0.16
TCF4-238ENST00000568169 FYB1O15117 783 aa16.02■□□□□ 0.16
TCF4-238ENST00000568169 RRS1Q15050 365 aaKnown RBP16.02■□□□□ 0.16
TCF4-238ENST00000568169 UBR3Q6ZT12 1888 aa16.01■□□□□ 0.15
TCF4-238ENST00000568169 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
TCF4-238ENST00000568169 RAPGEF4Q8WZA2 1011 aa16.01■□□□□ 0.15
TCF4-238ENST00000568169 TOGARAM1Q9Y4F4 1720 aa16.01■□□□□ 0.15
TCF4-238ENST00000568169 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
TCF4-238ENST00000568169 MSL1Q68DK7 614 aa16■□□□□ 0.15
TCF4-238ENST00000568169 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
TCF4-238ENST00000568169 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
TCF4-238ENST00000568169 INSRP06213 1382 aa16■□□□□ 0.15
TCF4-238ENST00000568169 C4BP0C0L5 1744 aa15.99■□□□□ 0.15
TCF4-238ENST00000568169 TATP17735 454 aaPredicted RBP15.99■□□□□ 0.15
TCF4-238ENST00000568169 NCBP3Q53F19 620 aaKnown RBP15.99■□□□□ 0.15
TCF4-238ENST00000568169 FLAD1Q8NFF5 587 aa15.99■□□□□ 0.15
TCF4-238ENST00000568169 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
TCF4-238ENST00000568169 PKD1L3Q7Z443 1732 aa15.99■□□□□ 0.15
TCF4-238ENST00000568169 PALLDQ8WX93 1383 aa15.99■□□□□ 0.15
TCF4-238ENST00000568169 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
TCF4-238ENST00000568169 PCDH11XQ9BZA7 1347 aa15.98■□□□□ 0.15
TCF4-238ENST00000568169 PCDH11YQ9BZA8 1340 aa15.98■□□□□ 0.15
TCF4-238ENST00000568169 HOXD11P31277 338 aaPredicted RBP15.98■□□□□ 0.15
TCF4-238ENST00000568169 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
TCF4-238ENST00000568169 HSP90AB2PQ58FF8 381 aa15.97■□□□□ 0.15
TCF4-238ENST00000568169 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
TCF4-238ENST00000568169 CYP27B1O15528 508 aa15.96■□□□□ 0.15
TCF4-238ENST00000568169 MPRIPQ6WCQ1 1025 aa15.96■□□□□ 0.15
TCF4-238ENST00000568169 FLT4P35916 1363 aa15.96■□□□□ 0.15
TCF4-238ENST00000568169 TMF1P82094 1093 aa15.94■□□□□ 0.14
TCF4-238ENST00000568169 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
TCF4-238ENST00000568169 RNF216Q9NWF9 866 aaPredicted RBP15.94■□□□□ 0.14
TCF4-238ENST00000568169 ADCY9O60503 1353 aa15.94■□□□□ 0.14
TCF4-238ENST00000568169 ANKRD26Q9UPS8 1709 aa15.94■□□□□ 0.14
TCF4-238ENST00000568169 AMIGO3Q86WK7 504 aa15.93■□□□□ 0.14
TCF4-238ENST00000568169 NCAPD2Q15021 1401 aa15.93■□□□□ 0.14
TCF4-238ENST00000568169 NKX1-1Q15270 411 aaPredicted RBP15.92■□□□□ 0.14
TCF4-238ENST00000568169 IFFO2Q5TF58 517 aa15.92■□□□□ 0.14
TCF4-238ENST00000568169 PIGBQ92521 554 aa15.91■□□□□ 0.14
TCF4-238ENST00000568169 AK7Q96M32 723 aa15.91■□□□□ 0.14
TCF4-238ENST00000568169 GPBP1L1Q9HC44 474 aaPredicted RBP15.91■□□□□ 0.14
TCF4-238ENST00000568169 NSD3Q9BZ95 1437 aa15.91■□□□□ 0.14
TCF4-238ENST00000568169 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
TCF4-238ENST00000568169 KIF13BQ9NQT8 1826 aa15.9■□□□□ 0.14
TCF4-238ENST00000568169 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
TCF4-238ENST00000568169 SMIM5Q71RC9 77 aa15.89■□□□□ 0.13
TCF4-238ENST00000568169 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
TCF4-238ENST00000568169 EMILIN1Q9Y6C2 1016 aa15.89■□□□□ 0.13
TCF4-238ENST00000568169 IGSF1Q8N6C5 1336 aa15.89■□□□□ 0.13
TCF4-238ENST00000568169 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
TCF4-238ENST00000568169 PHF14O94880 888 aa15.88■□□□□ 0.13
TCF4-238ENST00000568169 SSFA2P28290 1259 aa15.88■□□□□ 0.13
TCF4-238ENST00000568169 SIK1P57059 783 aa15.88■□□□□ 0.13
TCF4-238ENST00000568169 CDCA8Q53HL2 280 aa15.88■□□□□ 0.13
TCF4-238ENST00000568169 LINC00116Q8NCU8 138 aa15.87■□□□□ 0.13
TCF4-238ENST00000568169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.87■□□□□ 0.13
TCF4-238ENST00000568169 SPG7Q9UQ90 795 aa15.87■□□□□ 0.13
TCF4-238ENST00000568169 KIAA1551Q9HCM1 1747 aa15.86■□□□□ 0.13
TCF4-238ENST00000568169 HSPA6P17066 643 aa15.86■□□□□ 0.13
TCF4-238ENST00000568169 WASHC2AQ641Q2 1341 aa15.86■□□□□ 0.13
TCF4-238ENST00000568169 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
TCF4-238ENST00000568169 N4BP2Q86UW6 1770 aaPredicted RBP15.85■□□□□ 0.13
TCF4-238ENST00000568169 ITPK1Q13572 414 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms