RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 WDR7Q9Y4E6 1490 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 LCE2BO14633 110 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
CAPN3-218ENST00000568153 SKOR1P84550 965 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 MCM6Q14566 821 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 MTMR14Q8NCE2 650 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 SIN3AQ96ST3 1273 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 MAP10Q9P2G4 905 aa8.85□□□□□ -0.99
CAPN3-218ENST00000568153 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.85□□□□□ -0.99
CAPN3-218ENST00000568153 PLEKHH2Q8IVE3 1493 aa8.84□□□□□ -0.99
CAPN3-218ENST00000568153 KCNH2Q12809 1159 aa8.84□□□□□ -0.99
CAPN3-218ENST00000568153 FOXC1Q12948 553 aa8.84□□□□□ -0.99
CAPN3-218ENST00000568153 Q6ZNB5 142 aa8.84□□□□□ -0.99
CAPN3-218ENST00000568153 ZCCHC11Q5TAX3 1644 aaKnown RBP8.83□□□□□ -1
CAPN3-218ENST00000568153 MBD5Q9P267 1494 aa8.83□□□□□ -1
CAPN3-218ENST00000568153 WNT7AO00755 349 aa8.83□□□□□ -1
CAPN3-218ENST00000568153 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
CAPN3-218ENST00000568153 UNC93B1Q9H1C4 597 aa8.83□□□□□ -1
CAPN3-218ENST00000568153 ARHGAP5Q13017 1502 aa8.83□□□□□ -1
CAPN3-218ENST00000568153 CTHP32929 405 aa8.82□□□□□ -1
CAPN3-218ENST00000568153 WNT7BP56706 349 aa8.82□□□□□ -1
CAPN3-218ENST00000568153 NR6A1Q15406 480 aa8.82□□□□□ -1
CAPN3-218ENST00000568153 AFAP1Q8N556 730 aa8.82□□□□□ -1
CAPN3-218ENST00000568153 GJD4Q96KN9 370 aaPredicted RBP8.82□□□□□ -1
CAPN3-218ENST00000568153 TRIM34Q9BYJ4 488 aa8.82□□□□□ -1
CAPN3-218ENST00000568153 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
CAPN3-218ENST00000568153 C9orf84Q5VXU9 1444 aa8.81□□□□□ -1
CAPN3-218ENST00000568153 FLIIQ13045 1269 aa8.81□□□□□ -1
CAPN3-218ENST00000568153 TOR4AQ9NXH8 423 aa8.81□□□□□ -1
CAPN3-218ENST00000568153 SPAG9O60271 1321 aaKnown RBP8.8□□□□□ -1
CAPN3-218ENST00000568153 CD109Q6YHK3 1445 aa8.8□□□□□ -1
CAPN3-218ENST00000568153 DNMT1P26358 1616 aaKnown RBP8.8□□□□□ -1
CAPN3-218ENST00000568153 SOCS7O14512 581 aa8.8□□□□□ -1
CAPN3-218ENST00000568153 ADGRL2O95490 1459 aa8.8□□□□□ -1
CAPN3-218ENST00000568153 ANKRD50Q9ULJ7 1429 aa8.8□□□□□ -1
CAPN3-218ENST00000568153 CCDC141Q6ZP82 1450 aa8.79□□□□□ -1
CAPN3-218ENST00000568153 SH3BP2P78314 561 aa8.79□□□□□ -1
CAPN3-218ENST00000568153 FAM69CQ0P6D2 419 aa8.79□□□□□ -1
CAPN3-218ENST00000568153 MRGPRX2Q96LB1 330 aa8.79□□□□□ -1
CAPN3-218ENST00000568153 SHANK2Q9UPX8 1470 aa8.78□□□□□ -1
CAPN3-218ENST00000568153 NUP155O75694 1391 aa8.78□□□□□ -1
CAPN3-218ENST00000568153 KIF15Q9NS87 1388 aa8.78□□□□□ -1
CAPN3-218ENST00000568153 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
CAPN3-218ENST00000568153 RC3H1Q5TC82 1133 aaKnown RBP8.78□□□□□ -1
CAPN3-218ENST00000568153 ARHGEF5Q12774 1597 aa8.78□□□□□ -1
CAPN3-218ENST00000568153 CDC42BPAQ5VT25 1732 aa8.77□□□□□ -1
CAPN3-218ENST00000568153 ARAP3Q8WWN8 1544 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 DGAT1O75907 488 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 BAP1Q92560 729 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 SCAPERQ9BY12 1400 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 TTC37Q6PGP7 1564 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 FANCAO15360 1455 aa8.77□□□□□ -1.01
CAPN3-218ENST00000568153 ARHGEF12Q9NZN5 1544 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 FAM187AA6NFU0 413 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 TRAF7Q6Q0C0 670 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 CYP4X1Q8N118 509 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 RTEL1-TNFRSF6BF6WH68 1400 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 TRAPPC8Q9Y2L5 1435 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 SAMD9LQ8IVG5 1584 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 PREX2Q70Z35 1606 aa8.76□□□□□ -1.01
CAPN3-218ENST00000568153 MAPKBP1O60336 1514 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 CDC42BPBQ9Y5S2 1711 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 GPR37L1O60883 481 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 PKDCCQ504Y2 493 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 SNIP1Q8TAD8 396 aaKnown RBP8.75□□□□□ -1.01
CAPN3-218ENST00000568153 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 TBC1D2BQ9UPU7 963 aa8.75□□□□□ -1.01
CAPN3-218ENST00000568153 TONSLQ96HA7 1378 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 RIMBP3CA6NJZ7 1639 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 RIMBP3BA6NNM3 1639 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 RIMBP3Q9UFD9 1639 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 APBB1O00213 710 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 SIAH2O43255 324 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 FKBPLQ9UIM3 349 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 COG6Q9Y2V7 657 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 NDUFB9Q9Y6M9 179 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 SYCP2Q9BX26 1530 aa8.74□□□□□ -1.01
CAPN3-218ENST00000568153 ANKRD30BQ9BXX2 1392 aa8.73□□□□□ -1.01
CAPN3-218ENST00000568153 ABCA9Q8IUA7 1624 aa8.73□□□□□ -1.01
CAPN3-218ENST00000568153 MYT1Q01538 1121 aa8.73□□□□□ -1.01
CAPN3-218ENST00000568153 EHBP1Q8NDI1 1231 aa8.73□□□□□ -1.01
CAPN3-218ENST00000568153 GDPD2Q9HCC8 539 aa8.73□□□□□ -1.01
CAPN3-218ENST00000568153 KDM6BO15054 1643 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 ADGRL1O94910 1474 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 MYO5CQ9NQX4 1742 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 TTC24A2A3L6 582 aaPredicted RBP8.72□□□□□ -1.01
CAPN3-218ENST00000568153 SMPD1P17405 629 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 ARMC2Q8NEN0 867 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 CLUAP1Q96AJ1 413 aa8.72□□□□□ -1.01
CAPN3-218ENST00000568153 DHX29Q7Z478 1369 aaKnown RBP8.72□□□□□ -1.01
CAPN3-218ENST00000568153 J3QL48 77 aa8.71□□□□□ -1.02
CAPN3-218ENST00000568153 KIF3BO15066 747 aa8.71□□□□□ -1.02
CAPN3-218ENST00000568153 RAPGEF3O95398 923 aa8.71□□□□□ -1.02
CAPN3-218ENST00000568153 AVPP01185 164 aa8.71□□□□□ -1.02
CAPN3-218ENST00000568153 L3MBTL2Q969R5 705 aa8.71□□□□□ -1.02
CAPN3-218ENST00000568153 MAST1Q9Y2H9 1570 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 GCC2Q8IWJ2 1684 aa8.7□□□□□ -1.02
CAPN3-218ENST00000568153 NBPF14Q5TI25 921 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms