RNA–Protein interactions for RNA: ENST00000568018.5

SCAMP5-215, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-215ENST00000568018 AMPHP49418 695 aa23.93■■□□□ 1.42
SCAMP5-215ENST00000568018 USHBP1Q8N6Y0 703 aa23.93■■□□□ 1.42
SCAMP5-215ENST00000568018 AKT1S1Q96B36 256 aa23.93■■□□□ 1.42
SCAMP5-215ENST00000568018 FYB1O15117 783 aa23.91■■□□□ 1.42
SCAMP5-215ENST00000568018 PRIM1P49642 420 aaKnown RBP23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 NBPF6Q5VWK0 638 aa23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 SYTL4Q96C24 671 aaPredicted RBP23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 NBPF4Q96M43 638 aa23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 CHD4Q14839 1912 aa23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 RTL1A6NKG5 1358 aa23.9■■□□□ 1.42
SCAMP5-215ENST00000568018 PNPLA7Q6ZV29 1317 aa23.89■■□□□ 1.42
SCAMP5-215ENST00000568018 TOGARAM1Q9Y4F4 1720 aa23.89■■□□□ 1.41
SCAMP5-215ENST00000568018 ARXQ96QS3 562 aa23.87■■□□□ 1.41
SCAMP5-215ENST00000568018 ZCRB1Q8TBF4 217 aaKnown RBP23.86■■□□□ 1.41
SCAMP5-215ENST00000568018 DCAF8L1A6NGE4 600 aa23.85■■□□□ 1.41
SCAMP5-215ENST00000568018 TMF1P82094 1093 aa23.84■■□□□ 1.41
SCAMP5-215ENST00000568018 HSP90AB2PQ58FF8 381 aa23.84■■□□□ 1.41
SCAMP5-215ENST00000568018 C5P01031 1676 aa23.83■■□□□ 1.41
SCAMP5-215ENST00000568018 MAP3K5Q99683 1374 aa23.83■■□□□ 1.41
SCAMP5-215ENST00000568018 TAF1LQ8IZX4 1826 aa23.83■■□□□ 1.41
SCAMP5-215ENST00000568018 SLC27A3Q5K4L6 730 aa23.83■■□□□ 1.41
SCAMP5-215ENST00000568018 ANKRD26Q9UPS8 1709 aa23.83■■□□□ 1.41
SCAMP5-215ENST00000568018 ITGB4P16144 1822 aa23.82■■□□□ 1.4
SCAMP5-215ENST00000568018 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
SCAMP5-215ENST00000568018 PKD1L3Q7Z443 1732 aa23.81■■□□□ 1.4
SCAMP5-215ENST00000568018 NSD3Q9BZ95 1437 aa23.8■■□□□ 1.4
SCAMP5-215ENST00000568018 INSRP06213 1382 aa23.79■■□□□ 1.4
SCAMP5-215ENST00000568018 ZNF784Q8NCA9 323 aaPredicted RBP23.79■■□□□ 1.4
SCAMP5-215ENST00000568018 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
SCAMP5-215ENST00000568018 FLT4P35916 1363 aa23.78■■□□□ 1.4
SCAMP5-215ENST00000568018 SMG6Q86US8 1419 aaKnown RBP23.78■■□□□ 1.4
SCAMP5-215ENST00000568018 TFCP2L1Q9NZI6 479 aa23.78■■□□□ 1.4
SCAMP5-215ENST00000568018 CCNL1Q9UK58 526 aaPredicted RBP23.78■■□□□ 1.4
SCAMP5-215ENST00000568018 MAP2P11137 1827 aaKnown RBP23.77■■□□□ 1.4
SCAMP5-215ENST00000568018 TRIM26Q12899 539 aaPredicted RBP23.77■■□□□ 1.4
SCAMP5-215ENST00000568018 KLHL34Q8N239 644 aa23.77■■□□□ 1.4
SCAMP5-215ENST00000568018 NLGN2Q8NFZ4 835 aa23.76■■□□□ 1.39
SCAMP5-215ENST00000568018 SLC24A1O60721 1099 aa23.75■■□□□ 1.39
SCAMP5-215ENST00000568018 RAPGEF4Q8WZA2 1011 aa23.75■■□□□ 1.39
SCAMP5-215ENST00000568018 CYP27B1O15528 508 aa23.74■■□□□ 1.39
SCAMP5-215ENST00000568018 COL23A1Q86Y22 540 aaPredicted RBP23.74■■□□□ 1.39
SCAMP5-215ENST00000568018 SLC16A10Q8TF71 515 aa23.74■■□□□ 1.39
SCAMP5-215ENST00000568018 NCAPD2Q15021 1401 aa23.74■■□□□ 1.39
SCAMP5-215ENST00000568018 TATP17735 454 aaPredicted RBP23.73■■□□□ 1.39
SCAMP5-215ENST00000568018 CGNL1Q0VF96 1302 aa23.72■■□□□ 1.39
SCAMP5-215ENST00000568018 PCDH11XQ9BZA7 1347 aa23.71■■□□□ 1.39
SCAMP5-215ENST00000568018 PCDH11YQ9BZA8 1340 aa23.71■■□□□ 1.39
SCAMP5-215ENST00000568018 MSL1Q68DK7 614 aa23.71■■□□□ 1.39
SCAMP5-215ENST00000568018 AMIGO3Q86WK7 504 aa23.71■■□□□ 1.39
SCAMP5-215ENST00000568018 UBR3Q6ZT12 1888 aa23.7■■□□□ 1.39
SCAMP5-215ENST00000568018 C4BP0C0L5 1744 aa23.7■■□□□ 1.39
SCAMP5-215ENST00000568018 KIF24Q5T7B8 1368 aa23.7■■□□□ 1.38
SCAMP5-215ENST00000568018 PALLDQ8WX93 1383 aa23.7■■□□□ 1.38
SCAMP5-215ENST00000568018 POLD1P28340 1107 aa23.69■■□□□ 1.38
SCAMP5-215ENST00000568018 MPRIPQ6WCQ1 1025 aa23.68■■□□□ 1.38
SCAMP5-215ENST00000568018 SMIM5Q71RC9 77 aa23.68■■□□□ 1.38
SCAMP5-215ENST00000568018 GPR162Q16538 588 aa23.67■■□□□ 1.38
SCAMP5-215ENST00000568018 PPM1GO15355 546 aaPredicted RBP23.66■■□□□ 1.38
SCAMP5-215ENST00000568018 MSH5O43196 834 aa23.66■■□□□ 1.38
SCAMP5-215ENST00000568018 CDCA8Q53HL2 280 aa23.66■■□□□ 1.38
SCAMP5-215ENST00000568018 PELP1Q8IZL8 1130 aaKnown RBP23.66■■□□□ 1.38
SCAMP5-215ENST00000568018 YBX3P16989 372 aaKnown RBP eCLIP23.64■■□□□ 1.37
SCAMP5-215ENST00000568018 EYA1Q99502 592 aa23.63■■□□□ 1.37
SCAMP5-215ENST00000568018 PIGBQ92521 554 aa23.62■■□□□ 1.37
SCAMP5-215ENST00000568018 POLKQ9UBT6 870 aa23.61■■□□□ 1.37
SCAMP5-215ENST00000568018 WASHC2AQ641Q2 1341 aa23.6■■□□□ 1.37
SCAMP5-215ENST00000568018 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
SCAMP5-215ENST00000568018 TNNT2P45379 298 aaPredicted RBP23.58■■□□□ 1.37
SCAMP5-215ENST00000568018 NKX1-1Q15270 411 aaPredicted RBP23.58■■□□□ 1.37
SCAMP5-215ENST00000568018 LINC00116Q8NCU8 138 aa23.57■■□□□ 1.36
SCAMP5-215ENST00000568018 PHF14O94880 888 aa23.56■■□□□ 1.36
SCAMP5-215ENST00000568018 EIF4A2Q14240 407 aaKnown RBP23.56■■□□□ 1.36
SCAMP5-215ENST00000568018 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
SCAMP5-215ENST00000568018 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
SCAMP5-215ENST00000568018 ITPK1Q13572 414 aa23.54■■□□□ 1.36
SCAMP5-215ENST00000568018 PHKG2P15735 406 aa23.53■■□□□ 1.36
SCAMP5-215ENST00000568018 AK7Q96M32 723 aa23.53■■□□□ 1.36
SCAMP5-215ENST00000568018 SPG7Q9UQ90 795 aa23.53■■□□□ 1.36
SCAMP5-215ENST00000568018 LOC102724428A0A0B4J2F2 783 aa23.52■■□□□ 1.36
SCAMP5-215ENST00000568018 SIK1P57059 783 aa23.52■■□□□ 1.36
SCAMP5-215ENST00000568018 C1QTNF8P60827 252 aa23.52■■□□□ 1.36
SCAMP5-215ENST00000568018 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
SCAMP5-215ENST00000568018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.51■■□□□ 1.35
SCAMP5-215ENST00000568018 WWC3Q9ULE0 1092 aa23.51■■□□□ 1.35
SCAMP5-215ENST00000568018 TIMELESSQ9UNS1 1208 aa23.51■■□□□ 1.35
SCAMP5-215ENST00000568018 COL5A3P25940 1745 aaPredicted RBP23.5■■□□□ 1.35
SCAMP5-215ENST00000568018 HSPA5P11021 654 aaKnown RBP23.5■■□□□ 1.35
SCAMP5-215ENST00000568018 KDRP35968 1356 aa23.5■■□□□ 1.35
SCAMP5-215ENST00000568018 KIAA1551Q9HCM1 1747 aa23.5■■□□□ 1.35
SCAMP5-215ENST00000568018 TMOD3Q9NYL9 352 aa23.49■■□□□ 1.35
SCAMP5-215ENST00000568018 CEP350Q5VT06 3117 aa23.49■■□□□ 1.35
SCAMP5-215ENST00000568018 SENP3-EIF4A1A0A087X0R7 540 aa23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 FLAD1Q8NFF5 587 aa23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 SLC4A9Q96Q91 983 aa23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 ATG3Q9NT62 314 aa23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 IGSF1Q8N6C5 1336 aa23.48■■□□□ 1.35
SCAMP5-215ENST00000568018 MYH14Q7Z406 1995 aaKnown RBP23.47■■□□□ 1.35
SCAMP5-215ENST00000568018 IFNL2Q8IZJ0 200 aa23.47■■□□□ 1.35
SCAMP5-215ENST00000568018 CD2APQ9Y5K6 639 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms