RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 MAP3K19Q56UN5 1328 aa15.13■□□□□ 0.01
LINC01228-201ENST00000567966 IL2RBP14784 551 aa15.12■□□□□ 0.01
LINC01228-201ENST00000567966 ACSBG1Q96GR2 724 aa15.12■□□□□ 0.01
LINC01228-201ENST00000567966 PER1O15534 1290 aaPredicted RBP15.11■□□□□ 0.01
LINC01228-201ENST00000567966 HOXC9P31274 260 aa15.11■□□□□ 0.01
LINC01228-201ENST00000567966 GGNBP2Q9H3C7 697 aa15.11■□□□□ 0.01
LINC01228-201ENST00000567966 NHSQ6T4R5 1651 aa15.11■□□□□ 0.01
LINC01228-201ENST00000567966 MYOM1P52179 1685 aa15.1■□□□□ 0.01
LINC01228-201ENST00000567966 ZNF316A6NFI3 1004 aaPredicted RBP15.1■□□□□ 0.01
LINC01228-201ENST00000567966 PDGFDQ9GZP0 370 aaPredicted RBP15.1■□□□□ 0.01
LINC01228-201ENST00000567966 FAM208AQ9UK61 1670 aaKnown RBP15.09■□□□□ 0.01
LINC01228-201ENST00000567966 AMPHP49418 695 aa15.09■□□□□ 0.01
LINC01228-201ENST00000567966 RRS1Q15050 365 aaKnown RBP15.09■□□□□ 0.01
LINC01228-201ENST00000567966 TXNRD1Q16881 649 aa15.09■□□□□ 0.01
LINC01228-201ENST00000567966 KIF20BQ96Q89 1820 aa15.08■□□□□ 0.01
LINC01228-201ENST00000567966 NSD2O96028 1365 aa15.08■□□□□ 0
LINC01228-201ENST00000567966 CASZ1Q86V15 1759 aa15.08■□□□□ 0
LINC01228-201ENST00000567966 NSD3Q9BZ95 1437 aa15.08■□□□□ 0
LINC01228-201ENST00000567966 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
LINC01228-201ENST00000567966 BTAF1O14981 1849 aa15.07■□□□□ 0
LINC01228-201ENST00000567966 AMER1Q5JTC6 1135 aaPredicted RBP15.06■□□□□ 0
LINC01228-201ENST00000567966 DDX54Q8TDD1 881 aaKnown RBP15.06■□□□□ 0
LINC01228-201ENST00000567966 NPC1L1Q9UHC9 1359 aa15.06■□□□□ 0
LINC01228-201ENST00000567966 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
LINC01228-201ENST00000567966 SPON1Q9HCB6 807 aa15.05■□□□□ -0
LINC01228-201ENST00000567966 MEGF6O75095 1541 aa15.04■□□□□ -0
LINC01228-201ENST00000567966 NBPF6Q5VWK0 638 aa15.04■□□□□ -0
LINC01228-201ENST00000567966 USHBP1Q8N6Y0 703 aa15.04■□□□□ -0
LINC01228-201ENST00000567966 NBPF4Q96M43 638 aa15.04■□□□□ -0
LINC01228-201ENST00000567966 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
LINC01228-201ENST00000567966 RTL1A6NKG5 1358 aa15.03■□□□□ -0
LINC01228-201ENST00000567966 SLC15A2Q16348 729 aa15.02■□□□□ -0
LINC01228-201ENST00000567966 HSP90AB2PQ58FF8 381 aa15.02■□□□□ -0
LINC01228-201ENST00000567966 MORC1Q86VD1 984 aa15.02■□□□□ -0
LINC01228-201ENST00000567966 DOT1LQ8TEK3 1739 aa15.02□□□□□ -0.01
LINC01228-201ENST00000567966 PAPPAQ13219 1627 aa15.02□□□□□ -0.01
LINC01228-201ENST00000567966 ZBTB7AO95365 584 aa15.01□□□□□ -0.01
LINC01228-201ENST00000567966 LRRC4BQ9NT99 713 aa15.01□□□□□ -0.01
LINC01228-201ENST00000567966 STK32BQ9NY57 414 aa15.01□□□□□ -0.01
LINC01228-201ENST00000567966 KIF24Q5T7B8 1368 aa15□□□□□ -0.01
LINC01228-201ENST00000567966 DDX10Q13206 875 aaKnown RBP15□□□□□ -0.01
LINC01228-201ENST00000567966 ZCRB1Q8TBF4 217 aaKnown RBP15□□□□□ -0.01
LINC01228-201ENST00000567966 PPP1R1BQ9UD71 204 aaPredicted RBP15□□□□□ -0.01
LINC01228-201ENST00000567966 EMILIN1Q9Y6C2 1016 aa15□□□□□ -0.01
LINC01228-201ENST00000567966 PRIM1P49642 420 aaKnown RBP14.99□□□□□ -0.01
LINC01228-201ENST00000567966 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
LINC01228-201ENST00000567966 INSRP06213 1382 aa14.98□□□□□ -0.01
LINC01228-201ENST00000567966 KCNQ4P56696 695 aa14.98□□□□□ -0.01
LINC01228-201ENST00000567966 ZNF827Q17R98 1081 aa14.98□□□□□ -0.01
LINC01228-201ENST00000567966 SYTL4Q96C24 671 aaPredicted RBP14.98□□□□□ -0.01
LINC01228-201ENST00000567966 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
LINC01228-201ENST00000567966 FLT4P35916 1363 aa14.98□□□□□ -0.01
LINC01228-201ENST00000567966 PTGER2P43116 358 aa14.97□□□□□ -0.01
LINC01228-201ENST00000567966 MAP2P11137 1827 aaKnown RBP14.96□□□□□ -0.01
LINC01228-201ENST00000567966 SMG6Q86US8 1419 aaKnown RBP14.96□□□□□ -0.01
LINC01228-201ENST00000567966 ANKRD26Q9UPS8 1709 aa14.96□□□□□ -0.01
LINC01228-201ENST00000567966 LY75O60449 1722 aa14.95□□□□□ -0.02
LINC01228-201ENST00000567966 PPM1GO15355 546 aaPredicted RBP14.95□□□□□ -0.02
LINC01228-201ENST00000567966 CC2D1BQ5T0F9 858 aaKnown RBP14.95□□□□□ -0.02
LINC01228-201ENST00000567966 RAPGEF4Q8WZA2 1011 aa14.95□□□□□ -0.02
LINC01228-201ENST00000567966 POLKQ9UBT6 870 aa14.95□□□□□ -0.02
LINC01228-201ENST00000567966 CAPN15O75808 1086 aa14.94□□□□□ -0.02
LINC01228-201ENST00000567966 TATP17735 454 aaPredicted RBP14.94□□□□□ -0.02
LINC01228-201ENST00000567966 AKT1S1Q96B36 256 aa14.94□□□□□ -0.02
LINC01228-201ENST00000567966 TUBGCP6Q96RT7 1819 aa14.94□□□□□ -0.02
LINC01228-201ENST00000567966 RALBP1Q15311 655 aa14.93□□□□□ -0.02
LINC01228-201ENST00000567966 SGIP1Q9BQI5 828 aa14.93□□□□□ -0.02
LINC01228-201ENST00000567966 MTFR1LQ9H019 292 aa14.92□□□□□ -0.02
LINC01228-201ENST00000567966 TOGARAM1Q9Y4F4 1720 aa14.92□□□□□ -0.02
LINC01228-201ENST00000567966 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
LINC01228-201ENST00000567966 CYP27B1O15528 508 aa14.91□□□□□ -0.02
LINC01228-201ENST00000567966 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
LINC01228-201ENST00000567966 SLC27A3Q5K4L6 730 aa14.91□□□□□ -0.02
LINC01228-201ENST00000567966 QSER1Q2KHR3 1735 aa14.91□□□□□ -0.02
LINC01228-201ENST00000567966 PKD1L3Q7Z443 1732 aa14.91□□□□□ -0.02
LINC01228-201ENST00000567966 EYA1Q99502 592 aa14.9□□□□□ -0.02
LINC01228-201ENST00000567966 FHDC1Q9C0D6 1143 aaPredicted RBP14.9□□□□□ -0.02
LINC01228-201ENST00000567966 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
LINC01228-201ENST00000567966 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
LINC01228-201ENST00000567966 ITGB4P16144 1822 aa14.89□□□□□ -0.03
LINC01228-201ENST00000567966 PNPLA7Q6ZV29 1317 aa14.89□□□□□ -0.03
LINC01228-201ENST00000567966 MTHFSP49914 203 aa14.88□□□□□ -0.03
LINC01228-201ENST00000567966 CCNL1Q9UK58 526 aaPredicted RBP14.88□□□□□ -0.03
LINC01228-201ENST00000567966 EIF4A2Q14240 407 aaKnown RBP14.87□□□□□ -0.03
LINC01228-201ENST00000567966 SYT17Q9BSW7 474 aa14.87□□□□□ -0.03
LINC01228-201ENST00000567966 TFCP2L1Q9NZI6 479 aa14.87□□□□□ -0.03
LINC01228-201ENST00000567966 PPP2R1AP30153 589 aa14.86□□□□□ -0.03
LINC01228-201ENST00000567966 MPRIPQ6WCQ1 1025 aa14.86□□□□□ -0.03
LINC01228-201ENST00000567966 ARXQ96QS3 562 aa14.86□□□□□ -0.03
LINC01228-201ENST00000567966 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
LINC01228-201ENST00000567966 COL24A1Q17RW2 1714 aa14.86□□□□□ -0.03
LINC01228-201ENST00000567966 TAF1LQ8IZX4 1826 aa14.85□□□□□ -0.03
LINC01228-201ENST00000567966 C5P01031 1676 aa14.85□□□□□ -0.03
LINC01228-201ENST00000567966 YY1P25490 414 aa14.85□□□□□ -0.03
LINC01228-201ENST00000567966 CFAP53Q96M91 514 aa14.85□□□□□ -0.03
LINC01228-201ENST00000567966 NKX1-1Q15270 411 aaPredicted RBP14.84□□□□□ -0.03
LINC01228-201ENST00000567966 PRKRIP1Q9H875 184 aaPredicted RBP14.84□□□□□ -0.03
LINC01228-201ENST00000567966 PALLDQ8WX93 1383 aa14.84□□□□□ -0.03
LINC01228-201ENST00000567966 COL23A1Q86Y22 540 aaPredicted RBP14.83□□□□□ -0.04
LINC01228-201ENST00000567966 SLC16A10Q8TF71 515 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms