RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 OVOS2Q6IE36 1432 aa19.22■□□□□ 0.67
COMMD4-221ENST00000567935 TTC21BQ7Z4L5 1316 aa19.22■□□□□ 0.67
COMMD4-221ENST00000567935 SBF2Q86WG5 1849 aa19.21■□□□□ 0.67
COMMD4-221ENST00000567935 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
COMMD4-221ENST00000567935 GOLGA2Q08379 1002 aa19.19■□□□□ 0.66
COMMD4-221ENST00000567935 GPR162Q16538 588 aa19.19■□□□□ 0.66
COMMD4-221ENST00000567935 NME9Q86XW9 330 aa19.19■□□□□ 0.66
COMMD4-221ENST00000567935 PELP1Q8IZL8 1130 aaKnown RBP19.19■□□□□ 0.66
COMMD4-221ENST00000567935 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
COMMD4-221ENST00000567935 APAF1O14727 1248 aa19.18■□□□□ 0.66
COMMD4-221ENST00000567935 DIAPH1O60610 1272 aaKnown RBP19.18■□□□□ 0.66
COMMD4-221ENST00000567935 STK32BQ9NY57 414 aa19.18■□□□□ 0.66
COMMD4-221ENST00000567935 MAP3K5Q99683 1374 aa19.18■□□□□ 0.66
COMMD4-221ENST00000567935 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
COMMD4-221ENST00000567935 SLC15A2Q16348 729 aa19.17■□□□□ 0.66
COMMD4-221ENST00000567935 NUTM2GQ5VZR2 741 aa19.17■□□□□ 0.66
COMMD4-221ENST00000567935 NGDNQ8NEJ9 315 aaKnown RBP19.17■□□□□ 0.66
COMMD4-221ENST00000567935 ARXQ96QS3 562 aa19.17■□□□□ 0.66
COMMD4-221ENST00000567935 THRAP3Q9Y2W1 955 aaKnown RBP19.17■□□□□ 0.66
COMMD4-221ENST00000567935 SALL2Q9Y467 1007 aaPredicted RBP19.17■□□□□ 0.66
COMMD4-221ENST00000567935 USP31Q70CQ4 1352 aa19.17■□□□□ 0.66
COMMD4-221ENST00000567935 U2AF1L5P0DN76 240 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-221ENST00000567935 U2AF1Q01081 240 aaKnown RBP eCLIP19.16■□□□□ 0.66
COMMD4-221ENST00000567935 CCDC27Q2M243 656 aa19.16■□□□□ 0.66
COMMD4-221ENST00000567935 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
COMMD4-221ENST00000567935 POLKQ9UBT6 870 aa19.16■□□□□ 0.66
COMMD4-221ENST00000567935 LRRC37A3O60309 1634 aa19.15■□□□□ 0.66
COMMD4-221ENST00000567935 RCAN3Q9UKA8 241 aa19.14■□□□□ 0.65
COMMD4-221ENST00000567935 USP54Q70EL1 1684 aa19.14■□□□□ 0.65
COMMD4-221ENST00000567935 GOLGB1Q14789 3259 aaKnown RBP19.13■□□□□ 0.65
COMMD4-221ENST00000567935 E9PSI1 815 aa19.13■□□□□ 0.65
COMMD4-221ENST00000567935 TXNRD1Q16881 649 aa19.13■□□□□ 0.65
COMMD4-221ENST00000567935 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
COMMD4-221ENST00000567935 FCHSD2O94868 740 aa19.11■□□□□ 0.65
COMMD4-221ENST00000567935 WDR63Q8IWG1 891 aa19.11■□□□□ 0.65
COMMD4-221ENST00000567935 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
COMMD4-221ENST00000567935 CDCA7LQ96GN5 454 aa19.11■□□□□ 0.65
COMMD4-221ENST00000567935 COL5A2P05997 1499 aaPredicted RBP19.1■□□□□ 0.65
COMMD4-221ENST00000567935 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
COMMD4-221ENST00000567935 DUSP27Q5VZP5 1158 aa19.1■□□□□ 0.65
COMMD4-221ENST00000567935 CPDO75976 1380 aa19.09■□□□□ 0.65
COMMD4-221ENST00000567935 MAPK8IP3Q9UPT6 1336 aa19.09■□□□□ 0.65
COMMD4-221ENST00000567935 HSPA6P17066 643 aa19.09■□□□□ 0.65
COMMD4-221ENST00000567935 NEFMP07197 916 aa19.08■□□□□ 0.64
COMMD4-221ENST00000567935 DDB1Q16531 1140 aa19.08■□□□□ 0.64
COMMD4-221ENST00000567935 WWC1Q8IX03 1113 aa19.08■□□□□ 0.64
COMMD4-221ENST00000567935 CRB1P82279 1406 aa19.08■□□□□ 0.64
COMMD4-221ENST00000567935 KIF24Q5T7B8 1368 aa19.07■□□□□ 0.64
COMMD4-221ENST00000567935 KLHL34Q8N239 644 aa19.07■□□□□ 0.64
COMMD4-221ENST00000567935 MARCH10Q8NA82 808 aaPredicted RBP19.07■□□□□ 0.64
COMMD4-221ENST00000567935 PLEKHF1Q96S99 279 aa19.07■□□□□ 0.64
COMMD4-221ENST00000567935 PPP4R2Q9NY27 417 aa19.07■□□□□ 0.64
COMMD4-221ENST00000567935 PIK3C2AO00443 1686 aa19.06■□□□□ 0.64
COMMD4-221ENST00000567935 RRP1P56182 461 aaKnown RBP19.06■□□□□ 0.64
COMMD4-221ENST00000567935 EMILIN1Q9Y6C2 1016 aa19.06■□□□□ 0.64
COMMD4-221ENST00000567935 ATP10DQ9P241 1426 aa19.06■□□□□ 0.64
COMMD4-221ENST00000567935 PPM1GO15355 546 aaPredicted RBP19.05■□□□□ 0.64
COMMD4-221ENST00000567935 IL13P35225 146 aa19.05■□□□□ 0.64
COMMD4-221ENST00000567935 BCL9O00512 1426 aa19.04■□□□□ 0.64
COMMD4-221ENST00000567935 USP19O94966 1318 aa19.03■□□□□ 0.64
COMMD4-221ENST00000567935 PAPPAQ13219 1627 aa19.03■□□□□ 0.64
COMMD4-221ENST00000567935 TMPOP42166 694 aaKnown RBP19.02■□□□□ 0.64
COMMD4-221ENST00000567935 NLGN2Q8NFZ4 835 aa19.02■□□□□ 0.64
COMMD4-221ENST00000567935 RSPH6AQ9H0K4 717 aa19.02■□□□□ 0.64
COMMD4-221ENST00000567935 IL16Q14005 1332 aa19.01■□□□□ 0.63
COMMD4-221ENST00000567935 YBX3P16989 372 aaKnown RBP eCLIP19.01■□□□□ 0.63
COMMD4-221ENST00000567935 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.01■□□□□ 0.63
COMMD4-221ENST00000567935 MYH16Q9H6N6 1097 aa19.01■□□□□ 0.63
COMMD4-221ENST00000567935 FLT4P35916 1363 aa19.01■□□□□ 0.63
COMMD4-221ENST00000567935 WNK3Q9BYP7 1800 aa19■□□□□ 0.63
COMMD4-221ENST00000567935 RRS1Q15050 365 aaKnown RBP19■□□□□ 0.63
COMMD4-221ENST00000567935 NLRP6P59044 892 aa18.99■□□□□ 0.63
COMMD4-221ENST00000567935 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
COMMD4-221ENST00000567935 ZNF827Q17R98 1081 aa18.99■□□□□ 0.63
COMMD4-221ENST00000567935 ABTB2Q8N961 1025 aa18.99■□□□□ 0.63
COMMD4-221ENST00000567935 GCP02774 474 aa18.98■□□□□ 0.63
COMMD4-221ENST00000567935 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
COMMD4-221ENST00000567935 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 ZBTB7CA1YPR0 619 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 CT47B1P0C2W7 299 aaPredicted RBP18.97■□□□□ 0.63
COMMD4-221ENST00000567935 FBLN1P23142 703 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
COMMD4-221ENST00000567935 NEUROD2Q15784 382 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 RRP7AQ9Y3A4 280 aaKnown RBP18.97■□□□□ 0.63
COMMD4-221ENST00000567935 MAP3K19Q56UN5 1328 aa18.97■□□□□ 0.63
COMMD4-221ENST00000567935 LMOD3Q0VAK6 560 aa18.96■□□□□ 0.63
COMMD4-221ENST00000567935 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
COMMD4-221ENST00000567935 EIF4A2Q14240 407 aaKnown RBP18.95■□□□□ 0.62
COMMD4-221ENST00000567935 NFE2L2Q16236 605 aa18.95■□□□□ 0.62
COMMD4-221ENST00000567935 KCNH5Q8NCM2 988 aa18.95■□□□□ 0.62
COMMD4-221ENST00000567935 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
COMMD4-221ENST00000567935 CAPN15O75808 1086 aa18.94■□□□□ 0.62
COMMD4-221ENST00000567935 RIPK4P57078 832 aa18.94■□□□□ 0.62
COMMD4-221ENST00000567935 ZNF526Q8TF50 670 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-221ENST00000567935 SPINK5Q9NQ38 1064 aaPredicted RBP18.94■□□□□ 0.62
COMMD4-221ENST00000567935 POLD1P28340 1107 aa18.93■□□□□ 0.62
COMMD4-221ENST00000567935 AMPHP49418 695 aa18.93■□□□□ 0.62
COMMD4-221ENST00000567935 TRIM35Q9UPQ4 493 aa18.93■□□□□ 0.62
COMMD4-221ENST00000567935 COL24A1Q17RW2 1714 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms