RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 THUMPD2Q9BTF0 503 aaKnown RBP14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 CASTP20810 708 aaKnown RBP14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 ZNF428Q96B54 188 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 SRCIN1Q9C0H9 1055 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 CFAP45Q9UL16 551 aa14.66□□□□□ -0.06
CSPG4P13-202ENST00000567704 DAPK1P53355 1430 aa14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 SFPQP23246 707 aaKnown RBP eCLIP14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 URI1O94763 535 aaPredicted RBP14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 KIAA0754O94854 1291 aa14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 EHBP1L1Q8N3D4 1523 aa14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 PRIM1P49642 420 aaKnown RBP14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 RIC3Q7Z5B4 369 aa14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 PBRM1Q86U86 1689 aa14.65□□□□□ -0.06
CSPG4P13-202ENST00000567704 VPS53Q5VIR6 699 aa14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 PPFIBP1Q86W92 1011 aa14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 CCDC191Q8NCU4 936 aa14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 FAM193AP78312 1265 aa14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 RBM42Q9BTD8 480 aaKnown RBP14.64□□□□□ -0.07
CSPG4P13-202ENST00000567704 DDX54Q8TDD1 881 aaKnown RBP14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 LARP6Q9BRS8 491 aaKnown RBP14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 ERICH2A1L162 156 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 DCTN1Q14203 1278 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 DDX11Q96FC9 970 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 CALRP27797 417 aaKnown RBP14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 TTC5Q8N0Z6 440 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 STK11IPQ8N1F8 1099 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 CBFA2T2O43439 604 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 CCDC94Q9BW85 323 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P13-202ENST00000567704 UVSSAQ2YD98 709 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 NUTM1Q86Y26 1132 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 TIGD1Q96MW7 591 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 C9orf84Q5VXU9 1444 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 CFAP100Q494V2 611 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 JMYQ8N9B5 988 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 DHX16O60231 1041 aaKnown RBP14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 USP8P40818 1118 aa14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 NOL10Q9BSC4 688 aaKnown RBP14.62□□□□□ -0.07
CSPG4P13-202ENST00000567704 SRGAP3O43295 1099 aa14.61□□□□□ -0.07
CSPG4P13-202ENST00000567704 MX1P20591 662 aa14.61□□□□□ -0.07
CSPG4P13-202ENST00000567704 SCAND2PQ9GZW5 306 aaPredicted RBP14.61□□□□□ -0.07
CSPG4P13-202ENST00000567704 EID1Q9Y6B2 187 aa14.61□□□□□ -0.07
CSPG4P13-202ENST00000567704 GIMAP6Q6P9H5 292 aa14.61□□□□□ -0.07
CSPG4P13-202ENST00000567704 RRP12Q5JTH9 1297 aaKnown RBP14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 NUP160Q12769 1436 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 RAB3GAP1Q15042 981 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 HDGFL1Q5TGJ6 251 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 KRT222Q8N1A0 295 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 GPRASP1Q5JY77 1395 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 FCHSD2O94868 740 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 ALDH1L2Q3SY69 923 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 HS1BP3Q53T59 392 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 ERC1Q8IUD2 1116 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 DHX37Q8IY37 1157 aaKnown RBP14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 AFAP1Q8N556 730 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 SNX21Q969T3 373 aa14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 TROQ12816 1431 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P13-202ENST00000567704 GAS2L2Q8NHY3 880 aa14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 FAM177BA6PVY3 158 aa14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 SMTNL1A8MU46 457 aa14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 PRPF40BQ6NWY9 871 aaKnown RBP14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 GTPBP4Q9BZE4 634 aaKnown RBP14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 SIL1Q9H173 461 aa14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 TFIP11Q9UBB9 837 aaKnown RBP14.59□□□□□ -0.07
CSPG4P13-202ENST00000567704 RPRD2Q5VT52 1461 aaKnown RBP14.58□□□□□ -0.07
CSPG4P13-202ENST00000567704 NFE2L2Q16236 605 aa14.58□□□□□ -0.07
CSPG4P13-202ENST00000567704 ANO10Q9NW15 660 aa14.58□□□□□ -0.07
CSPG4P13-202ENST00000567704 CEP135Q66GS9 1140 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 CENPHQ9H3R5 247 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 CABP1Q9NZU7 370 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 PDIA4P13667 645 aaKnown RBP14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 ZNF165P49910 485 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 PLB1Q6P1J6 1458 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 SMC5Q8IY18 1101 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 SMAP1Q8IYB5 467 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 PLCD4Q9BRC7 762 aa14.58□□□□□ -0.08
CSPG4P13-202ENST00000567704 EPRSP07814 1512 aaKnown RBP14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 STX6O43752 255 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 ARHGAP29Q52LW3 1261 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 TMX3Q96JJ7 454 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 PRAM1Q96QH2 718 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 UBE2HP62256 183 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 HDAC1Q13547 482 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 AACSQ86V21 672 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 PAXBP1Q9Y5B6 917 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 PLEKHH1Q9ULM0 1364 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 GTF2E1P29083 439 aaPredicted RBP14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 NUCB1Q02818 461 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 CCDC186Q7Z3E2 898 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 TRIM34Q9BYJ4 488 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 TNNQ9UQP3 1299 aa14.57□□□□□ -0.08
CSPG4P13-202ENST00000567704 ZNHIT6Q9NWK9 470 aaKnown RBP14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 ZSCAN12O43309 604 aa14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 NEMFO60524 1076 aa14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 ZFP91Q96JP5 570 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P13-202ENST00000567704 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms