RNA–Protein interactions for RNA: ENST00000567638.1

SCAMP2-209, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 678 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-209ENST00000567638 NBPF6Q5VWK0 638 aa20.91■□□□□ 0.94
SCAMP2-209ENST00000567638 NBPF4Q96M43 638 aa20.91■□□□□ 0.94
SCAMP2-209ENST00000567638 PDGFDQ9GZP0 370 aaPredicted RBP20.91■□□□□ 0.94
SCAMP2-209ENST00000567638 PPP1R1BQ9UD71 204 aaPredicted RBP20.9■□□□□ 0.94
SCAMP2-209ENST00000567638 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
SCAMP2-209ENST00000567638 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
SCAMP2-209ENST00000567638 ZCRB1Q8TBF4 217 aaKnown RBP20.89■□□□□ 0.93
SCAMP2-209ENST00000567638 TUBGCP6Q96RT7 1819 aa20.89■□□□□ 0.93
SCAMP2-209ENST00000567638 CGNL1Q0VF96 1302 aa20.88■□□□□ 0.93
SCAMP2-209ENST00000567638 PKD1L3Q7Z443 1732 aa20.88■□□□□ 0.93
SCAMP2-209ENST00000567638 CCER1Q8TC90 406 aaPredicted RBP20.87■□□□□ 0.93
SCAMP2-209ENST00000567638 NSD2O96028 1365 aa20.86■□□□□ 0.93
SCAMP2-209ENST00000567638 ZBTB7AO95365 584 aa20.86■□□□□ 0.93
SCAMP2-209ENST00000567638 RAPGEF4Q8WZA2 1011 aa20.86■□□□□ 0.93
SCAMP2-209ENST00000567638 EIF4G2P78344 907 aaKnown RBP eCLIP20.85■□□□□ 0.93
SCAMP2-209ENST00000567638 EMILIN1Q9Y6C2 1016 aa20.85■□□□□ 0.93
SCAMP2-209ENST00000567638 ITGB4P16144 1822 aa20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 PRIM1P49642 420 aaKnown RBP20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 SYTL4Q96C24 671 aaPredicted RBP20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 POLR3GLQ9BT43 218 aa20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 LRRC4BQ9NT99 713 aa20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 NCAPD2Q15021 1401 aa20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 TOGARAM1Q9Y4F4 1720 aa20.84■□□□□ 0.93
SCAMP2-209ENST00000567638 HSPA5P11021 654 aaKnown RBP20.83■□□□□ 0.93
SCAMP2-209ENST00000567638 SLC27A3Q5K4L6 730 aa20.83■□□□□ 0.93
SCAMP2-209ENST00000567638 PTGER2P43116 358 aa20.82■□□□□ 0.92
SCAMP2-209ENST00000567638 ZNF827Q17R98 1081 aa20.82■□□□□ 0.92
SCAMP2-209ENST00000567638 MTFR1LQ9H019 292 aa20.81■□□□□ 0.92
SCAMP2-209ENST00000567638 ATF5Q9Y2D1 282 aaPredicted RBP20.81■□□□□ 0.92
SCAMP2-209ENST00000567638 COL24A1Q17RW2 1714 aa20.81■□□□□ 0.92
SCAMP2-209ENST00000567638 PCDH11XQ9BZA7 1347 aa20.8■□□□□ 0.92
SCAMP2-209ENST00000567638 PCDH11YQ9BZA8 1340 aa20.8■□□□□ 0.92
SCAMP2-209ENST00000567638 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
SCAMP2-209ENST00000567638 TAF1LQ8IZX4 1826 aa20.79■□□□□ 0.92
SCAMP2-209ENST00000567638 PPM1GO15355 546 aaPredicted RBP20.79■□□□□ 0.92
SCAMP2-209ENST00000567638 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
SCAMP2-209ENST00000567638 C5P01031 1676 aa20.79■□□□□ 0.92
SCAMP2-209ENST00000567638 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
SCAMP2-209ENST00000567638 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
SCAMP2-209ENST00000567638 KCNQ4P56696 695 aa20.75■□□□□ 0.91
SCAMP2-209ENST00000567638 CYP27B1O15528 508 aa20.74■□□□□ 0.91
SCAMP2-209ENST00000567638 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
SCAMP2-209ENST00000567638 DCAF8L1A6NGE4 600 aa20.73■□□□□ 0.91
SCAMP2-209ENST00000567638 EYA1Q99502 592 aa20.73■□□□□ 0.91
SCAMP2-209ENST00000567638 PANK3Q9H999 370 aa20.73■□□□□ 0.91
SCAMP2-209ENST00000567638 PNPLA7Q6ZV29 1317 aa20.73■□□□□ 0.91
SCAMP2-209ENST00000567638 TNNT2P45379 298 aaPredicted RBP20.72■□□□□ 0.91
SCAMP2-209ENST00000567638 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
SCAMP2-209ENST00000567638 FHDC1Q9C0D6 1143 aaPredicted RBP20.71■□□□□ 0.91
SCAMP2-209ENST00000567638 TFCP2L1Q9NZI6 479 aa20.71■□□□□ 0.91
SCAMP2-209ENST00000567638 ARXQ96QS3 562 aa20.7■□□□□ 0.9
SCAMP2-209ENST00000567638 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
SCAMP2-209ENST00000567638 EIF4A2Q14240 407 aaKnown RBP20.69■□□□□ 0.9
SCAMP2-209ENST00000567638 MPRIPQ6WCQ1 1025 aa20.69■□□□□ 0.9
SCAMP2-209ENST00000567638 SYT17Q9BSW7 474 aa20.69■□□□□ 0.9
SCAMP2-209ENST00000567638 PALLDQ8WX93 1383 aa20.69■□□□□ 0.9
SCAMP2-209ENST00000567638 C4BP0C0L5 1744 aa20.68■□□□□ 0.9
SCAMP2-209ENST00000567638 NKX1-1Q15270 411 aaPredicted RBP20.68■□□□□ 0.9
SCAMP2-209ENST00000567638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.68■□□□□ 0.9
SCAMP2-209ENST00000567638 MAP3K5Q99683 1374 aa20.68■□□□□ 0.9
SCAMP2-209ENST00000567638 PLEKHG2Q9H7P9 1386 aa20.68■□□□□ 0.9
SCAMP2-209ENST00000567638 YY1P25490 414 aa20.66■□□□□ 0.9
SCAMP2-209ENST00000567638 UBR3Q6ZT12 1888 aa20.66■□□□□ 0.9
SCAMP2-209ENST00000567638 CHD4Q14839 1912 aa20.66■□□□□ 0.9
SCAMP2-209ENST00000567638 IGSF1Q8N6C5 1336 aa20.65■□□□□ 0.9
SCAMP2-209ENST00000567638 SMARCC1Q92922 1105 aaPredicted RBP20.64■□□□□ 0.89
SCAMP2-209ENST00000567638 HMGB2P26583 209 aaKnown RBP20.63■□□□□ 0.89
SCAMP2-209ENST00000567638 POLD1P28340 1107 aa20.63■□□□□ 0.89
SCAMP2-209ENST00000567638 MORC1Q86VD1 984 aa20.63■□□□□ 0.89
SCAMP2-209ENST00000567638 PIGBQ92521 554 aa20.63■□□□□ 0.89
SCAMP2-209ENST00000567638 PHKG2P15735 406 aa20.62■□□□□ 0.89
SCAMP2-209ENST00000567638 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
SCAMP2-209ENST00000567638 KNSTRNQ9Y448 316 aa20.62■□□□□ 0.89
SCAMP2-209ENST00000567638 KIF7Q2M1P5 1343 aa20.61■□□□□ 0.89
SCAMP2-209ENST00000567638 COL23A1Q86Y22 540 aaPredicted RBP20.61■□□□□ 0.89
SCAMP2-209ENST00000567638 MSH5O43196 834 aa20.6■□□□□ 0.89
SCAMP2-209ENST00000567638 TMOD3Q9NYL9 352 aa20.6■□□□□ 0.89
SCAMP2-209ENST00000567638 ZNF831Q5JPB2 1677 aa20.59■□□□□ 0.89
SCAMP2-209ENST00000567638 AMER1Q5JTC6 1135 aaPredicted RBP20.57■□□□□ 0.88
SCAMP2-209ENST00000567638 KLHL34Q8N239 644 aa20.57■□□□□ 0.88
SCAMP2-209ENST00000567638 FLAD1Q8NFF5 587 aa20.57■□□□□ 0.88
SCAMP2-209ENST00000567638 VIRMAQ69YN4 1812 aaKnown RBP20.56■□□□□ 0.88
SCAMP2-209ENST00000567638 SCN11AQ9UI33 1791 aa20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 SIK1P57059 783 aa20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 AK7Q96M32 723 aa20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 ASAP1Q9ULH1 1129 aa20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 COL5A3P25940 1745 aaPredicted RBP20.55■□□□□ 0.88
SCAMP2-209ENST00000567638 PLEKHO1Q53GL0 409 aaPredicted RBP20.54■□□□□ 0.88
SCAMP2-209ENST00000567638 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
SCAMP2-209ENST00000567638 HSP90AB1P08238 724 aaKnown RBP20.53■□□□□ 0.88
SCAMP2-209ENST00000567638 MSL1Q68DK7 614 aa20.53■□□□□ 0.88
SCAMP2-209ENST00000567638 AEBP1Q8IUX7 1158 aa20.53■□□□□ 0.88
SCAMP2-209ENST00000567638 KDRP35968 1356 aa20.53■□□□□ 0.88
SCAMP2-209ENST00000567638 AMOTQ4VCS5 1084 aa20.52■□□□□ 0.88
SCAMP2-209ENST00000567638 ZNF530Q6P9A1 599 aaPredicted RBP20.52■□□□□ 0.88
SCAMP2-209ENST00000567638 LINC00116Q8NCU8 138 aa20.52■□□□□ 0.88
SCAMP2-209ENST00000567638 DCAF5Q96JK2 942 aa20.52■□□□□ 0.88
SCAMP2-209ENST00000567638 ATG3Q9NT62 314 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms