RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 MON2Q7Z3U7 1717 aa13.02□□□□□ -0.32
CDH13-210ENST00000567445 CDCA7Q9BWT1 371 aaPredicted RBP13.02□□□□□ -0.33
CDH13-210ENST00000567445 NFAT5O94916 1531 aa13.02□□□□□ -0.33
CDH13-210ENST00000567445 LRRC37A3O60309 1634 aa13.02□□□□□ -0.33
CDH13-210ENST00000567445 ATN1P54259 1190 aaPredicted RBP13.01□□□□□ -0.33
CDH13-210ENST00000567445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.01□□□□□ -0.33
CDH13-210ENST00000567445 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
CDH13-210ENST00000567445 BMP2KQ9NSY1 1161 aaPredicted RBP13.01□□□□□ -0.33
CDH13-210ENST00000567445 RREB1Q92766 1687 aa13.01□□□□□ -0.33
CDH13-210ENST00000567445 PEAK1Q9H792 1746 aa13.01□□□□□ -0.33
CDH13-210ENST00000567445 RGPD5Q99666 1765 aa13□□□□□ -0.33
CDH13-210ENST00000567445 CD163L1Q9NR16 1453 aa13□□□□□ -0.33
CDH13-210ENST00000567445 USP31Q70CQ4 1352 aa13□□□□□ -0.33
CDH13-210ENST00000567445 CSB-PGBD3P0DP91 1061 aa13□□□□□ -0.33
CDH13-210ENST00000567445 TMC1Q8TDI8 760 aa13□□□□□ -0.33
CDH13-210ENST00000567445 CARD10Q9BWT7 1032 aa13□□□□□ -0.33
CDH13-210ENST00000567445 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
CDH13-210ENST00000567445 NUP188Q5SRE5 1749 aa13□□□□□ -0.33
CDH13-210ENST00000567445 ABCC6O95255 1503 aa12.99□□□□□ -0.33
CDH13-210ENST00000567445 C7P10643 843 aa12.99□□□□□ -0.33
CDH13-210ENST00000567445 NBPF14Q5TI25 921 aa12.99□□□□□ -0.33
CDH13-210ENST00000567445 HDGFL2Q7Z4V5 671 aaPredicted RBP12.99□□□□□ -0.33
CDH13-210ENST00000567445 GSE1Q14687 1217 aa12.98□□□□□ -0.33
CDH13-210ENST00000567445 NME9Q86XW9 330 aa12.98□□□□□ -0.33
CDH13-210ENST00000567445 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
CDH13-210ENST00000567445 PUS7Q96PZ0 661 aaKnown RBP12.98□□□□□ -0.33
CDH13-210ENST00000567445 SLC12A5Q9H2X9 1139 aa12.98□□□□□ -0.33
CDH13-210ENST00000567445 SBF2Q86WG5 1849 aa12.98□□□□□ -0.33
CDH13-210ENST00000567445 USP54Q70EL1 1684 aa12.98□□□□□ -0.33
CDH13-210ENST00000567445 MARCH10Q8NA82 808 aaPredicted RBP12.97□□□□□ -0.33
CDH13-210ENST00000567445 TERF2IPQ9NYB0 399 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 METRNQ9UJH8 293 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 BCL9O00512 1426 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
CDH13-210ENST00000567445 CCDC7Q96M83 1385 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 PLSCR1O15162 318 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 PYGBP11216 843 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 IFNL1Q8IU54 200 aa12.97□□□□□ -0.33
CDH13-210ENST00000567445 BCL11BQ9C0K0 894 aaPredicted RBP12.97□□□□□ -0.33
CDH13-210ENST00000567445 RGPD3A6NKT7 1758 aaPredicted RBP12.96□□□□□ -0.33
CDH13-210ENST00000567445 RGPD4Q7Z3J3 1758 aa12.96□□□□□ -0.33
CDH13-210ENST00000567445 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
CDH13-210ENST00000567445 ERBB3P21860 1342 aa12.95□□□□□ -0.34
CDH13-210ENST00000567445 EXOC5O00471 708 aa12.95□□□□□ -0.34
CDH13-210ENST00000567445 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
CDH13-210ENST00000567445 TESK2Q96S53 571 aa12.95□□□□□ -0.34
CDH13-210ENST00000567445 NINLQ9Y2I6 1382 aa12.94□□□□□ -0.34
CDH13-210ENST00000567445 ST20-MTHFSA0A0A6YYL1 179 aa12.94□□□□□ -0.34
CDH13-210ENST00000567445 VSIG10Q8N0Z9 540 aa12.94□□□□□ -0.34
CDH13-210ENST00000567445 SPOCK2Q92563 424 aa12.94□□□□□ -0.34
CDH13-210ENST00000567445 LTN1O94822 1766 aa12.93□□□□□ -0.34
CDH13-210ENST00000567445 TTLL13PA6NNM8 815 aa12.93□□□□□ -0.34
CDH13-210ENST00000567445 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
CDH13-210ENST00000567445 NLRP2Q9NX02 1062 aa12.93□□□□□ -0.34
CDH13-210ENST00000567445 TNS2Q63HR2 1409 aa12.92□□□□□ -0.34
CDH13-210ENST00000567445 POTEB2H3BUK9 544 aa12.91□□□□□ -0.34
CDH13-210ENST00000567445 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
CDH13-210ENST00000567445 IL2RBP14784 551 aa12.91□□□□□ -0.34
CDH13-210ENST00000567445 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
CDH13-210ENST00000567445 ANO8Q9HCE9 1232 aaPredicted RBP12.9□□□□□ -0.34
CDH13-210ENST00000567445 KCNQ2O43526 872 aa12.89□□□□□ -0.35
CDH13-210ENST00000567445 IP6K1Q92551 441 aa12.89□□□□□ -0.35
CDH13-210ENST00000567445 COG3Q96JB2 828 aa12.89□□□□□ -0.35
CDH13-210ENST00000567445 TXNRD1Q16881 649 aa12.88□□□□□ -0.35
CDH13-210ENST00000567445 ANKRD36BQ8N2N9 1353 aa12.87□□□□□ -0.35
CDH13-210ENST00000567445 TMF1P82094 1093 aa12.87□□□□□ -0.35
CDH13-210ENST00000567445 PPP1R1BQ9UD71 204 aaPredicted RBP12.87□□□□□ -0.35
CDH13-210ENST00000567445 NHSQ6T4R5 1651 aa12.87□□□□□ -0.35
CDH13-210ENST00000567445 USP47Q96K76 1375 aa12.86□□□□□ -0.35
CDH13-210ENST00000567445 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
CDH13-210ENST00000567445 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
CDH13-210ENST00000567445 TRIM35Q9UPQ4 493 aa12.86□□□□□ -0.35
CDH13-210ENST00000567445 MAP3K19Q56UN5 1328 aa12.86□□□□□ -0.35
CDH13-210ENST00000567445 CHRM1P11229 460 aaPredicted RBP12.85□□□□□ -0.35
CDH13-210ENST00000567445 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
CDH13-210ENST00000567445 STK32BQ9NY57 414 aa12.85□□□□□ -0.35
CDH13-210ENST00000567445 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
CDH13-210ENST00000567445 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
CDH13-210ENST00000567445 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
CDH13-210ENST00000567445 HOXC9P31274 260 aa12.85□□□□□ -0.35
CDH13-210ENST00000567445 AMPHP49418 695 aa12.85□□□□□ -0.35
CDH13-210ENST00000567445 SLC15A2Q16348 729 aa12.84□□□□□ -0.35
CDH13-210ENST00000567445 TPRNQ4KMQ1 711 aa12.84□□□□□ -0.35
CDH13-210ENST00000567445 CDCA8Q53HL2 280 aa12.84□□□□□ -0.35
CDH13-210ENST00000567445 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
CDH13-210ENST00000567445 PDGFDQ9GZP0 370 aaPredicted RBP12.84□□□□□ -0.35
CDH13-210ENST00000567445 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
CDH13-210ENST00000567445 PCDHB8Q9UN66 801 aa12.84□□□□□ -0.35
CDH13-210ENST00000567445 FYB1O15117 783 aa12.83□□□□□ -0.36
CDH13-210ENST00000567445 FBLN1P23142 703 aa12.83□□□□□ -0.36
CDH13-210ENST00000567445 RTL1A6NKG5 1358 aa12.82□□□□□ -0.36
CDH13-210ENST00000567445 BTAF1O14981 1849 aa12.82□□□□□ -0.36
CDH13-210ENST00000567445 ZBTB7AO95365 584 aa12.82□□□□□ -0.36
CDH13-210ENST00000567445 ZNF467Q7Z7K2 595 aaPredicted RBP12.82□□□□□ -0.36
CDH13-210ENST00000567445 DDX54Q8TDD1 881 aaKnown RBP12.82□□□□□ -0.36
CDH13-210ENST00000567445 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CDH13-210ENST00000567445 GGNBP2Q9H3C7 697 aa12.81□□□□□ -0.36
CDH13-210ENST00000567445 TIMELESSQ9UNS1 1208 aa12.81□□□□□ -0.36
CDH13-210ENST00000567445 RRS1Q15050 365 aaKnown RBP12.8□□□□□ -0.36
CDH13-210ENST00000567445 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms