RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 RTL1A6NKG5 1358 aa21.27■■□□□ 1
CDR2-206ENST00000567406 PAPPAQ13219 1627 aa21.27■■□□□ 1
CDR2-206ENST00000567406 YY1P25490 414 aa21.27■■□□□ 1
CDR2-206ENST00000567406 MTFR1LQ9H019 292 aa21.27■■□□□ 1
CDR2-206ENST00000567406 NSD3Q9BZ95 1437 aa21.27■■□□□ 1
CDR2-206ENST00000567406 KIF20BQ96Q89 1820 aa21.27■□□□□ 0.99
CDR2-206ENST00000567406 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
CDR2-206ENST00000567406 EMILIN1Q9Y6C2 1016 aa21.26■□□□□ 0.99
CDR2-206ENST00000567406 UTRNP46939 3433 aa21.26■□□□□ 0.99
CDR2-206ENST00000567406 DOT1LQ8TEK3 1739 aa21.25■□□□□ 0.99
CDR2-206ENST00000567406 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
CDR2-206ENST00000567406 SGIP1Q9BQI5 828 aa21.25■□□□□ 0.99
CDR2-206ENST00000567406 FHDC1Q9C0D6 1143 aaPredicted RBP21.25■□□□□ 0.99
CDR2-206ENST00000567406 NSD2O96028 1365 aa21.24■□□□□ 0.99
CDR2-206ENST00000567406 PPM1GO15355 546 aaPredicted RBP21.24■□□□□ 0.99
CDR2-206ENST00000567406 RAPGEF4Q8WZA2 1011 aa21.24■□□□□ 0.99
CDR2-206ENST00000567406 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
CDR2-206ENST00000567406 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
CDR2-206ENST00000567406 INSRP06213 1382 aa21.23■□□□□ 0.99
CDR2-206ENST00000567406 SMG6Q86US8 1419 aaKnown RBP21.22■□□□□ 0.99
CDR2-206ENST00000567406 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
CDR2-206ENST00000567406 SYT17Q9BSW7 474 aa21.22■□□□□ 0.99
CDR2-206ENST00000567406 TIMELESSQ9UNS1 1208 aa21.22■□□□□ 0.99
CDR2-206ENST00000567406 FLT4P35916 1363 aa21.22■□□□□ 0.99
CDR2-206ENST00000567406 ARXQ96QS3 562 aa21.2■□□□□ 0.98
CDR2-206ENST00000567406 TFCP2L1Q9NZI6 479 aa21.2■□□□□ 0.98
CDR2-206ENST00000567406 PNPLA7Q6ZV29 1317 aa21.19■□□□□ 0.98
CDR2-206ENST00000567406 CCNL1Q9UK58 526 aaPredicted RBP21.18■□□□□ 0.98
CDR2-206ENST00000567406 TNNT2P45379 298 aaPredicted RBP21.17■□□□□ 0.98
CDR2-206ENST00000567406 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
CDR2-206ENST00000567406 CYP27B1O15528 508 aa21.16■□□□□ 0.98
CDR2-206ENST00000567406 TUBGCP6Q96RT7 1819 aa21.15■□□□□ 0.98
CDR2-206ENST00000567406 LY75O60449 1722 aa21.15■□□□□ 0.98
CDR2-206ENST00000567406 CLSPNQ9HAW4 1339 aa21.15■□□□□ 0.98
CDR2-206ENST00000567406 HSPA5P11021 654 aaKnown RBP21.15■□□□□ 0.98
CDR2-206ENST00000567406 MPRIPQ6WCQ1 1025 aa21.15■□□□□ 0.98
CDR2-206ENST00000567406 KLHL34Q8N239 644 aa21.15■□□□□ 0.98
CDR2-206ENST00000567406 PCDH11XQ9BZA7 1347 aa21.14■□□□□ 0.97
CDR2-206ENST00000567406 PCDH11YQ9BZA8 1340 aa21.14■□□□□ 0.97
CDR2-206ENST00000567406 MAP2P11137 1827 aaKnown RBP21.13■□□□□ 0.97
CDR2-206ENST00000567406 KIF24Q5T7B8 1368 aa21.13■□□□□ 0.97
CDR2-206ENST00000567406 MSH5O43196 834 aa21.13■□□□□ 0.97
CDR2-206ENST00000567406 EYA1Q99502 592 aa21.13■□□□□ 0.97
CDR2-206ENST00000567406 POLKQ9UBT6 870 aa21.13■□□□□ 0.97
CDR2-206ENST00000567406 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
CDR2-206ENST00000567406 CCER1Q8TC90 406 aaPredicted RBP21.11■□□□□ 0.97
CDR2-206ENST00000567406 EIF4G2P78344 907 aaKnown RBP eCLIP21.1■□□□□ 0.97
CDR2-206ENST00000567406 COL23A1Q86Y22 540 aaPredicted RBP21.1■□□□□ 0.97
CDR2-206ENST00000567406 SLC16A10Q8TF71 515 aa21.1■□□□□ 0.97
CDR2-206ENST00000567406 QSER1Q2KHR3 1735 aa21.09■□□□□ 0.97
CDR2-206ENST00000567406 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
CDR2-206ENST00000567406 POLD1P28340 1107 aa21.09■□□□□ 0.97
CDR2-206ENST00000567406 MSL1Q68DK7 614 aa21.09■□□□□ 0.97
CDR2-206ENST00000567406 PANK3Q9H999 370 aa21.09■□□□□ 0.97
CDR2-206ENST00000567406 PALLDQ8WX93 1383 aa21.09■□□□□ 0.97
CDR2-206ENST00000567406 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
CDR2-206ENST00000567406 PIGBQ92521 554 aa21.08■□□□□ 0.97
CDR2-206ENST00000567406 TOGARAM1Q9Y4F4 1720 aa21.08■□□□□ 0.97
CDR2-206ENST00000567406 EIF4A2Q14240 407 aaKnown RBP21.07■□□□□ 0.96
CDR2-206ENST00000567406 ITGB4P16144 1822 aa21.06■□□□□ 0.96
CDR2-206ENST00000567406 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
CDR2-206ENST00000567406 SPG7Q9UQ90 795 aa21.06■□□□□ 0.96
CDR2-206ENST00000567406 ANKRD26Q9UPS8 1709 aa21.06■□□□□ 0.96
CDR2-206ENST00000567406 PKD1L3Q7Z443 1732 aa21.05■□□□□ 0.96
CDR2-206ENST00000567406 PELP1Q8IZL8 1130 aaKnown RBP21.05■□□□□ 0.96
CDR2-206ENST00000567406 NLGN2Q8NFZ4 835 aa21.05■□□□□ 0.96
CDR2-206ENST00000567406 GPR162Q16538 588 aa21.04■□□□□ 0.96
CDR2-206ENST00000567406 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
CDR2-206ENST00000567406 MAP3K5Q99683 1374 aa21.04■□□□□ 0.96
CDR2-206ENST00000567406 NKX1-1Q15270 411 aaPredicted RBP21.03■□□□□ 0.96
CDR2-206ENST00000567406 C5P01031 1676 aa21.02■□□□□ 0.96
CDR2-206ENST00000567406 COL24A1Q17RW2 1714 aa21.02■□□□□ 0.96
CDR2-206ENST00000567406 PHKG2P15735 406 aa21.01■□□□□ 0.95
CDR2-206ENST00000567406 ZNF784Q8NCA9 323 aaPredicted RBP21.01■□□□□ 0.95
CDR2-206ENST00000567406 ASAP1Q9ULH1 1129 aa21.01■□□□□ 0.95
CDR2-206ENST00000567406 TAF1LQ8IZX4 1826 aa21.01■□□□□ 0.95
CDR2-206ENST00000567406 PHF14O94880 888 aa21■□□□□ 0.95
CDR2-206ENST00000567406 SMARCC1Q92922 1105 aaPredicted RBP21■□□□□ 0.95
CDR2-206ENST00000567406 IFNL2Q8IZJ0 200 aa20.99■□□□□ 0.95
CDR2-206ENST00000567406 AK7Q96M32 723 aa20.99■□□□□ 0.95
CDR2-206ENST00000567406 TMOD3Q9NYL9 352 aa20.99■□□□□ 0.95
CDR2-206ENST00000567406 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
CDR2-206ENST00000567406 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.98■□□□□ 0.952e-8■□□□□ 9.4
CDR2-206ENST00000567406 LOC102724428A0A0B4J2F2 783 aa20.97■□□□□ 0.95
CDR2-206ENST00000567406 SIK1P57059 783 aa20.97■□□□□ 0.95
CDR2-206ENST00000567406 MORC1Q86VD1 984 aa20.97■□□□□ 0.95
CDR2-206ENST00000567406 C4BP0C0L5 1744 aa20.97■□□□□ 0.95
CDR2-206ENST00000567406 CHD4Q14839 1912 aa20.96■□□□□ 0.95
CDR2-206ENST00000567406 ITPK1Q13572 414 aa20.95■□□□□ 0.94
CDR2-206ENST00000567406 ATG3Q9NT62 314 aa20.95■□□□□ 0.94
CDR2-206ENST00000567406 IGSF1Q8N6C5 1336 aa20.95■□□□□ 0.94
CDR2-206ENST00000567406 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.94■□□□□ 0.94
CDR2-206ENST00000567406 AEBP1Q8IUX7 1158 aa20.94■□□□□ 0.94
CDR2-206ENST00000567406 YBX3P16989 372 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDR2-206ENST00000567406 ATP6V1AP38606 617 aa20.93■□□□□ 0.94
CDR2-206ENST00000567406 FLAD1Q8NFF5 587 aa20.93■□□□□ 0.94
CDR2-206ENST00000567406 KNSTRNQ9Y448 316 aa20.92■□□□□ 0.94
CDR2-206ENST00000567406 UBR3Q6ZT12 1888 aa20.91■□□□□ 0.94
CDR2-206ENST00000567406 GNPATO15228 680 aa20.9■□□□□ 0.94
CDR2-206ENST00000567406 PLEKHO1Q53GL0 409 aaPredicted RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms