RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 RHOQP17081 205 aa7.89□□□□□ -1.15
CDH1-211ENST00000567320 MCCD1P59942 119 aaPredicted RBP7.89□□□□□ -1.15
CDH1-211ENST00000567320 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
CDH1-211ENST00000567320 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
CDH1-211ENST00000567320 KDF1Q8NAX2 398 aaPredicted RBP7.89□□□□□ -1.15
CDH1-211ENST00000567320 NLRP3Q96P20 1036 aa7.89□□□□□ -1.15
CDH1-211ENST00000567320 SLC27A3Q5K4L6 730 aa7.88□□□□□ -1.15
CDH1-211ENST00000567320 NANOS1Q8WY41 292 aaKnown RBP7.88□□□□□ -1.15
CDH1-211ENST00000567320 PRM3Q9NNZ6 103 aa7.88□□□□□ -1.15
CDH1-211ENST00000567320 A0A1W2PRU2 124 aa7.87□□□□□ -1.15
CDH1-211ENST00000567320 KRT76Q01546 638 aa7.87□□□□□ -1.15
CDH1-211ENST00000567320 RIPOR1Q6ZS17 1223 aa7.87□□□□□ -1.15
CDH1-211ENST00000567320 SENP3-EIF4A1A0A087X0R7 540 aa7.86□□□□□ -1.15
CDH1-211ENST00000567320 RNF144AP50876 292 aaPredicted RBP7.86□□□□□ -1.15
CDH1-211ENST00000567320 ERVK-9P63128 1117 aa7.86□□□□□ -1.15
CDH1-211ENST00000567320 RNFT1Q5M7Z0 435 aa7.86□□□□□ -1.15
CDH1-211ENST00000567320 CYP2U1Q7Z449 544 aa7.86□□□□□ -1.15
CDH1-211ENST00000567320 SCTRP47872 440 aa7.85□□□□□ -1.15
CDH1-211ENST00000567320 SVOPQ8N4V2 548 aa7.85□□□□□ -1.15
CDH1-211ENST00000567320 GAS2L1Q99501 681 aaPredicted RBP7.84□□□□□ -1.15
CDH1-211ENST00000567320 ARHGEF10LQ9HCE6 1279 aa7.84□□□□□ -1.15
CDH1-211ENST00000567320 MYCP01106 439 aaPredicted RBP7.83□□□□□ -1.16
CDH1-211ENST00000567320 POU4F2Q12837 409 aa7.83□□□□□ -1.16
CDH1-211ENST00000567320 FOXR1Q6PIV2 292 aa7.83□□□□□ -1.16
CDH1-211ENST00000567320 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
CDH1-211ENST00000567320 SOCS7O14512 581 aa7.82□□□□□ -1.16
CDH1-211ENST00000567320 GPC1P35052 558 aa7.82□□□□□ -1.16
CDH1-211ENST00000567320 RAB6BQ9NRW1 208 aa7.82□□□□□ -1.16
CDH1-211ENST00000567320 EIF4G2P78344 907 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH1-211ENST00000567320 OSBPL3Q9H4L5 887 aa7.81□□□□□ -1.16
CDH1-211ENST00000567320 CUEDC1Q9NWM3 386 aaPredicted RBP7.81□□□□□ -1.16
CDH1-211ENST00000567320 CEP126Q9P2H0 1117 aa7.81□□□□□ -1.16
CDH1-211ENST00000567320 GPR37L1O60883 481 aa7.8□□□□□ -1.16
CDH1-211ENST00000567320 CLN3Q13286 438 aa7.8□□□□□ -1.16
CDH1-211ENST00000567320 ADAMTS8Q9UP79 889 aa7.8□□□□□ -1.16
CDH1-211ENST00000567320 GPR25O00155 361 aa7.79□□□□□ -1.16
CDH1-211ENST00000567320 GTF2E1P29083 439 aaPredicted RBP7.79□□□□□ -1.16
CDH1-211ENST00000567320 SLFNL1Q499Z3 407 aa7.79□□□□□ -1.16
CDH1-211ENST00000567320 ZNF385CQ66K41 422 aaPredicted RBP7.79□□□□□ -1.16
CDH1-211ENST00000567320 NBPF10Q6P3W6 841 aaKnown RBP7.79□□□□□ -1.16
CDH1-211ENST00000567320 NBPF15Q8N660 670 aa7.79□□□□□ -1.16
CDH1-211ENST00000567320 WHAMMQ8TF30 809 aa7.79□□□□□ -1.16
CDH1-211ENST00000567320 CDCA7Q9BWT1 371 aaPredicted RBP7.79□□□□□ -1.16
CDH1-211ENST00000567320 TIMMDC1Q9NPL8 285 aa7.79□□□□□ -1.16
CDH1-211ENST00000567320 H7C1W4 665 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 ADAMTS2O95450 1211 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 GNRH1P01148 92 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 ABL2P42684 1182 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 MARSP56192 900 aaKnown RBP7.78□□□□□ -1.16
CDH1-211ENST00000567320 MAP3K10Q02779 954 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 TAS1R3Q7RTX0 852 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 TRIM22Q8IYM9 498 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 CNKSR1Q969H4 720 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 ZNF837Q96EG3 531 aaPredicted RBP7.78□□□□□ -1.16
CDH1-211ENST00000567320 DYRK1BQ9Y463 629 aa7.78□□□□□ -1.16
CDH1-211ENST00000567320 RNF225M0QZC1 329 aaPredicted RBP7.77□□□□□ -1.17
CDH1-211ENST00000567320 TRAK2O60296 914 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 SLURP2P0DP57 97 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 DBN1Q16643 649 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 GTPBP3Q969Y2 492 aaKnown RBP7.77□□□□□ -1.17
CDH1-211ENST00000567320 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 CCDC85AQ96PX6 553 aaPredicted RBP7.77□□□□□ -1.17
CDH1-211ENST00000567320 GRIP2Q9C0E4 1043 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 DOLKQ9UPQ8 538 aa7.77□□□□□ -1.17
CDH1-211ENST00000567320 WASLO00401 505 aaPredicted RBP7.76□□□□□ -1.17
CDH1-211ENST00000567320 PHKA2P46019 1235 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 SRSF11Q05519 484 aaKnown RBP7.76□□□□□ -1.17
CDH1-211ENST00000567320 VAC14Q08AM6 782 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 OXLD1Q5BKU9 147 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 TMEM214Q6NUQ4 689 aaKnown RBP7.76□□□□□ -1.17
CDH1-211ENST00000567320 RNF135Q8IUD6 432 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 GMCL1Q96IK5 515 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 GDPD2Q9HCC8 539 aa7.76□□□□□ -1.17
CDH1-211ENST00000567320 CENPCQ03188 943 aa7.75□□□□□ -1.17
CDH1-211ENST00000567320 USP4Q13107 963 aa7.75□□□□□ -1.17
CDH1-211ENST00000567320 TMEM151AQ8N4L1 468 aa7.75□□□□□ -1.17
CDH1-211ENST00000567320 ZSCAN10Q96SZ4 725 aaPredicted RBP7.75□□□□□ -1.17
CDH1-211ENST00000567320 GPAMQ9HCL2 828 aa7.75□□□□□ -1.17
CDH1-211ENST00000567320 GDF11O95390 407 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 IL2RAP01589 272 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 GAS6Q14393 721 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 TSGA10IPQ3SY00 556 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 ESCO1Q5FWF5 840 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 GNASQ5JWF2 1037 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 NUCKS1Q9H1E3 243 aaKnown RBP7.74□□□□□ -1.17
CDH1-211ENST00000567320 MBIPQ9NS73 344 aa7.74□□□□□ -1.17
CDH1-211ENST00000567320 SPATA31C2B4DYI2 1134 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 F11P03951 625 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 RASSF7Q02833 373 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 IRF5Q13568 498 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 LYPD4Q6UWN0 246 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 KCTD17Q8N5Z5 321 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 ENAMQ9NRM1 1142 aa7.73□□□□□ -1.17
CDH1-211ENST00000567320 PRKCSHP14314 528 aaPredicted RBP7.72□□□□□ -1.17
CDH1-211ENST00000567320 IRS1P35568 1242 aa7.72□□□□□ -1.17
CDH1-211ENST00000567320 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
CDH1-211ENST00000567320 WDR44Q5JSH3 913 aa7.72□□□□□ -1.17
CDH1-211ENST00000567320 SIRT1Q96EB6 747 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms