RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	MYT1	Q01538	1121 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	VPS72	Q15906	364 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	TCP11L2	Q8N4U5	519 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	QTRT2	Q9H974	415 aa	Known RBP	12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	TRPC5	Q9UL62	973 aa	Predicted RBP	12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	KDR	P35968	1356 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	SHANK3	Q9BYB0	1731 aa		12.39	□□□□□ -0.43
FANCA-223	ENST00000567284	NCAPD2	Q15021	1401 aa		12.38	□□□□□ -0.43
FANCA-223	ENST00000567284	PKD1L3	Q7Z443	1732 aa		12.38	□□□□□ -0.43
FANCA-223	ENST00000567284	IL2RB	P14784	551 aa		12.38	□□□□□ -0.43
FANCA-223	ENST00000567284	FAM98C	Q17RN3	349 aa	Known RBP	12.38	□□□□□ -0.43
FANCA-223	ENST00000567284	GLI3	P10071	1580 aa		12.38	□□□□□ -0.43
FANCA-223	ENST00000567284	ATRN	O75882	1429 aa		12.37	□□□□□ -0.43
FANCA-223	ENST00000567284	MTHFSD	Q2M296	383 aa	Known RBP	12.37	□□□□□ -0.43
FANCA-223	ENST00000567284	PLEKHO1	Q53GL0	409 aa	Predicted RBP	12.37	□□□□□ -0.43
FANCA-223	ENST00000567284	BRWD3	Q6RI45	1802 aa		12.37	□□□□□ -0.43
FANCA-223	ENST00000567284	TMPO	P42166	694 aa	Known RBP	12.36	□□□□□ -0.43
FANCA-223	ENST00000567284	RIPK4	P57078	832 aa		12.36	□□□□□ -0.43
FANCA-223	ENST00000567284	ZNF772	Q68DY9	489 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-223	ENST00000567284	ZNF530	Q6P9A1	599 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-223	ENST00000567284	GJD4	Q96KN9	370 aa	Predicted RBP	12.36	□□□□□ -0.43
FANCA-223	ENST00000567284	NFE2L2	Q16236	605 aa		12.35	□□□□□ -0.43
FANCA-223	ENST00000567284	GAS2L2	Q8NHY3	880 aa		12.35	□□□□□ -0.43
FANCA-223	ENST00000567284	SPG7	Q9UQ90	795 aa		12.35	□□□□□ -0.43
FANCA-223	ENST00000567284	THRAP3	Q9Y2W1	955 aa	Known RBP	12.35	□□□□□ -0.43
FANCA-223	ENST00000567284	LRRC37A3	O60309	1634 aa		12.35	□□□□□ -0.43
FANCA-223	ENST00000567284	SCN11A	Q9UI33	1791 aa		12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	AMOT	Q4VCS5	1084 aa		12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	C1orf141	Q5JVX7	400 aa		12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	ZCRB1	Q8TBF4	217 aa	Known RBP	12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	DDX54	Q8TDD1	881 aa	Known RBP	12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	OVOS2	A0A0G2JMS6	1433 aa		12.34	□□□□□ -0.43
FANCA-223	ENST00000567284	EXOC5	O00471	708 aa		12.33	□□□□□ -0.44
FANCA-223	ENST00000567284	BARGIN	Q6ZT62	677 aa		12.33	□□□□□ -0.44
FANCA-223	ENST00000567284	DISP2	A7MBM2	1401 aa		12.33	□□□□□ -0.44
FANCA-223	ENST00000567284	DCTN1	Q14203	1278 aa		12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	DDB1	Q16531	1140 aa		12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	CDCA7	Q9BWT1	371 aa	Predicted RBP	12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	RGS17	Q9UGC6	210 aa	Predicted RBP	12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	ITGB4	P16144	1822 aa		12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	THSD7A	Q9UPZ6	1657 aa		12.32	□□□□□ -0.44
FANCA-223	ENST00000567284	GNAT3	A8MTJ3	354 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	AKAP4	Q5JQC9	854 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	POTEA	Q6S8J7	498 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	MCM10	Q7L590	875 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	RTF1	Q92541	710 aa	Known RBP	12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	THUMPD2	Q9BTF0	503 aa	Known RBP	12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	PCDH11X	Q9BZA7	1347 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	PCDH11Y	Q9BZA8	1340 aa		12.31	□□□□□ -0.44
FANCA-223	ENST00000567284	MAP3K5	Q99683	1374 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	RXRB	P28702	533 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	RBM6	P78332	1123 aa	Known RBP	12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	MPRIP	Q6WCQ1	1025 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	SEPT12	Q8IYM1	358 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	IFNL2	Q8IZJ0	200 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	TRIM35	Q9UPQ4	493 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	LAS1L	Q9Y4W2	734 aa	Known RBP	12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	DOT1L	Q8TEK3	1739 aa		12.3	□□□□□ -0.44
FANCA-223	ENST00000567284	TNS2	Q63HR2	1409 aa		12.29	□□□□□ -0.44
FANCA-223	ENST00000567284	CYP27B1	O15528	508 aa		12.29	□□□□□ -0.44
FANCA-223	ENST00000567284	PHKG2	P15735	406 aa		12.29	□□□□□ -0.44
FANCA-223	ENST00000567284	LMOD3	Q0VAK6	560 aa		12.29	□□□□□ -0.44
FANCA-223	ENST00000567284	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	12.29	□□□□□ -0.44	2e-7	■■□□□ 11.7
FANCA-223	ENST00000567284	TOGARAM1	Q9Y4F4	1720 aa		12.28	□□□□□ -0.44
FANCA-223	ENST00000567284	PDE3B	Q13370	1112 aa		12.28	□□□□□ -0.44
FANCA-223	ENST00000567284	WWC1	Q8IX03	1113 aa		12.28	□□□□□ -0.44
FANCA-223	ENST00000567284	LGR6	Q9HBX8	967 aa		12.28	□□□□□ -0.44
FANCA-223	ENST00000567284	RNMT	O43148	476 aa	Known RBP	12.27	□□□□□ -0.45
FANCA-223	ENST00000567284	FAM182B	Q5T319	152 aa		12.27	□□□□□ -0.45
FANCA-223	ENST00000567284	ZBED9	Q6R2W3	1325 aa		12.27	□□□□□ -0.45
FANCA-223	ENST00000567284	SIPA1L3	O60292	1781 aa	Predicted RBP	12.27	□□□□□ -0.45
FANCA-223	ENST00000567284	SBF2	Q86WG5	1849 aa		12.27	□□□□□ -0.45
FANCA-223	ENST00000567284	HSP90AB1	P08238	724 aa	Known RBP	12.26	□□□□□ -0.45
FANCA-223	ENST00000567284	MARCH10	Q8NA82	808 aa	Predicted RBP	12.26	□□□□□ -0.45
FANCA-223	ENST00000567284	IL17RE	Q8NFR9	667 aa		12.26	□□□□□ -0.45
FANCA-223	ENST00000567284	HTATSF1	O43719	755 aa	Known RBP	12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	CCDC27	Q2M243	656 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	NGEF	Q8N5V2	710 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	CDCA7L	Q96GN5	454 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	ACSBG1	Q96GR2	724 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	PLEKHG2	Q9H7P9	1386 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	KDM6A	O15550	1401 aa	Predicted RBP	12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	ADAMTS7	Q9UKP4	1686 aa		12.25	□□□□□ -0.45
FANCA-223	ENST00000567284	RGS12	O14924	1447 aa		12.24	□□□□□ -0.45
FANCA-223	ENST00000567284	ONECUT3	O60422	494 aa	Predicted RBP	12.24	□□□□□ -0.45
FANCA-223	ENST00000567284	GOLGA2	Q08379	1002 aa		12.24	□□□□□ -0.45
FANCA-223	ENST00000567284	TEF	Q10587	303 aa		12.24	□□□□□ -0.45
FANCA-223	ENST00000567284	CABP4	P57796	275 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	KRT27	Q7Z3Y8	459 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	WDR63	Q8IWG1	891 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	SYTL4	Q96C24	671 aa	Predicted RBP	12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	DCAF5	Q96JK2	942 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	MIS18A	Q9NYP9	233 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	KDM3B	Q7LBC6	1761 aa		12.23	□□□□□ -0.45
FANCA-223	ENST00000567284	ZNF521	Q96K83	1311 aa		12.22	□□□□□ -0.45
FANCA-223	ENST00000567284	CALD1	Q05682	793 aa	Known RBP	12.22	□□□□□ -0.45
FANCA-223	ENST00000567284	NKX1-1	Q15270	411 aa	Predicted RBP	12.22	□□□□□ -0.45
FANCA-223	ENST00000567284	TSR2	Q969E8	191 aa	Known RBP	12.22	□□□□□ -0.45
FANCA-223	ENST00000567284	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.22	□□□□□ -0.45
FANCA-223	ENST00000567284	TAF7	Q15545	349 aa	Predicted RBP	12.21	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms