RNA–Protein interactions for RNA: ENST00000567283.5

RPUSD1-209, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 835 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-209ENST00000567283 ZNF827Q17R98 1081 aa34.22■■■■□ 3.07
RPUSD1-209ENST00000567283 ZCRB1Q8TBF4 217 aaKnown RBP34.21■■■■□ 3.07
RPUSD1-209ENST00000567283 LRRC4BQ9NT99 713 aa34.2■■■■□ 3.07
RPUSD1-209ENST00000567283 USHBP1Q8N6Y0 703 aa34.19■■■■□ 3.06
RPUSD1-209ENST00000567283 QSER1Q2KHR3 1735 aa34.18■■■■□ 3.06
RPUSD1-209ENST00000567283 PRIM1P49642 420 aaKnown RBP34.18■■■■□ 3.06
RPUSD1-209ENST00000567283 LY75O60449 1722 aa34.17■■■■□ 3.06
RPUSD1-209ENST00000567283 SLC27A3Q5K4L6 730 aa34.17■■■■□ 3.06
RPUSD1-209ENST00000567283 FHDC1Q9C0D6 1143 aaPredicted RBP34.17■■■■□ 3.06
RPUSD1-209ENST00000567283 TUBGCP6Q96RT7 1819 aa34.16■■■■□ 3.06
RPUSD1-209ENST00000567283 NBPF6Q5VWK0 638 aa34.16■■■■□ 3.06
RPUSD1-209ENST00000567283 RAPGEF4Q8WZA2 1011 aa34.16■■■■□ 3.06
RPUSD1-209ENST00000567283 NBPF4Q96M43 638 aa34.16■■■■□ 3.06
RPUSD1-209ENST00000567283 NSD3Q9BZ95 1437 aa34.15■■■■□ 3.06
RPUSD1-209ENST00000567283 FLT4P35916 1363 aa34.14■■■■□ 3.06
RPUSD1-209ENST00000567283 NSD2O96028 1365 aa34.12■■■■□ 3.05
RPUSD1-209ENST00000567283 INSRP06213 1382 aa34.12■■■■□ 3.05
RPUSD1-209ENST00000567283 CGNL1Q0VF96 1302 aa34.11■■■■□ 3.05
RPUSD1-209ENST00000567283 TATP17735 454 aaPredicted RBP34.11■■■■□ 3.05
RPUSD1-209ENST00000567283 KCNQ4P56696 695 aa34.11■■■■□ 3.05
RPUSD1-209ENST00000567283 ARXQ96QS3 562 aa34.11■■■■□ 3.05
RPUSD1-209ENST00000567283 SGIP1Q9BQI5 828 aa34.11■■■■□ 3.05
RPUSD1-209ENST00000567283 HSP90AB2PQ58FF8 381 aa34.1■■■■□ 3.05
RPUSD1-209ENST00000567283 AKT1S1Q96B36 256 aa34.1■■■■□ 3.05
RPUSD1-209ENST00000567283 SYT17Q9BSW7 474 aa34.1■■■■□ 3.05
RPUSD1-209ENST00000567283 KIF24Q5T7B8 1368 aa34.09■■■■□ 3.05
RPUSD1-209ENST00000567283 TFCP2L1Q9NZI6 479 aa34.08■■■■□ 3.05
RPUSD1-209ENST00000567283 PCDH11XQ9BZA7 1347 aa34.05■■■■□ 3.04
RPUSD1-209ENST00000567283 PCDH11YQ9BZA8 1340 aa34.05■■■■□ 3.04
RPUSD1-209ENST00000567283 CARD14Q9BXL6 1004 aa34.05■■■■□ 3.04
RPUSD1-209ENST00000567283 CCNL1Q9UK58 526 aaPredicted RBP34.05■■■■□ 3.04
RPUSD1-209ENST00000567283 PNPLA7Q6ZV29 1317 aa34.04■■■■□ 3.04
RPUSD1-209ENST00000567283 ANKRD26Q9UPS8 1709 aa34.04■■■■□ 3.04
RPUSD1-209ENST00000567283 KLHL34Q8N239 644 aa34.04■■■■□ 3.04
RPUSD1-209ENST00000567283 EMILIN1Q9Y6C2 1016 aa34.04■■■■□ 3.04
RPUSD1-209ENST00000567283 PPM1GO15355 546 aaPredicted RBP34.03■■■■□ 3.04
RPUSD1-209ENST00000567283 POLR3GLQ9BT43 218 aa34.03■■■■□ 3.04
RPUSD1-209ENST00000567283 POLD1P28340 1107 aa34.02■■■■□ 3.04
RPUSD1-209ENST00000567283 SLC16A10Q8TF71 515 aa34.02■■■■□ 3.04
RPUSD1-209ENST00000567283 C5P01031 1676 aa34.01■■■■□ 3.04
RPUSD1-209ENST00000567283 PKD1L3Q7Z443 1732 aa34.01■■■■□ 3.03
RPUSD1-209ENST00000567283 MAP3K5Q99683 1374 aa33.99■■■■□ 3.03
RPUSD1-209ENST00000567283 CCER1Q8TC90 406 aaPredicted RBP33.99■■■■□ 3.03
RPUSD1-209ENST00000567283 COL24A1Q17RW2 1714 aa33.99■■■■□ 3.03
RPUSD1-209ENST00000567283 MAP2P11137 1827 aaKnown RBP33.98■■■■□ 3.03
RPUSD1-209ENST00000567283 TOGARAM1Q9Y4F4 1720 aa33.98■■■■□ 3.03
RPUSD1-209ENST00000567283 MSH5O43196 834 aa33.97■■■■□ 3.03
RPUSD1-209ENST00000567283 CHD4Q14839 1912 aa33.96■■■■□ 3.03
RPUSD1-209ENST00000567283 ITGB4P16144 1822 aa33.96■■■■□ 3.03
RPUSD1-209ENST00000567283 UTRNP46939 3433 aa33.95■■■■□ 3.03
RPUSD1-209ENST00000567283 MPRIPQ6WCQ1 1025 aa33.92■■■■□ 3.02
RPUSD1-209ENST00000567283 PALLDQ8WX93 1383 aa33.92■■■■□ 3.02
RPUSD1-209ENST00000567283 TAF1LQ8IZX4 1826 aa33.92■■■■□ 3.02
RPUSD1-209ENST00000567283 CYP27B1O15528 508 aa33.9■■■■□ 3.02
RPUSD1-209ENST00000567283 NCAPD2Q15021 1401 aa33.88■■■■□ 3.01
RPUSD1-209ENST00000567283 GPR162Q16538 588 aa33.88■■■■□ 3.01
RPUSD1-209ENST00000567283 PELP1Q8IZL8 1130 aaKnown RBP33.87■■■■□ 3.01
RPUSD1-209ENST00000567283 WASHC2AQ641Q2 1341 aa33.86■■■■□ 3.01
RPUSD1-209ENST00000567283 SPG7Q9UQ90 795 aa33.86■■■■□ 3.01
RPUSD1-209ENST00000567283 TNNT2P45379 298 aaPredicted RBP33.85■■■■□ 3.01
RPUSD1-209ENST00000567283 COL23A1Q86Y22 540 aaPredicted RBP33.84■■■■□ 3.01
RPUSD1-209ENST00000567283 C4BP0C0L5 1744 aa33.84■■■■□ 3.01
RPUSD1-209ENST00000567283 MSL1Q68DK7 614 aa33.83■■■■□ 3.01
RPUSD1-209ENST00000567283 HMGB2P26583 209 aaKnown RBP33.82■■■■□ 3
RPUSD1-209ENST00000567283 ZNF784Q8NCA9 323 aaPredicted RBP33.82■■■■□ 3
RPUSD1-209ENST00000567283 SMARCC1Q92922 1105 aaPredicted RBP33.82■■■■□ 3
RPUSD1-209ENST00000567283 EIF4G2P78344 907 aaKnown RBP eCLIP33.81■■■■□ 3
RPUSD1-209ENST00000567283 EYA1Q99502 592 aa33.81■■■■□ 3
RPUSD1-209ENST00000567283 POLKQ9UBT6 870 aa33.81■■■■□ 3
RPUSD1-209ENST00000567283 NLGN2Q8NFZ4 835 aa33.79■■■■□ 3
RPUSD1-209ENST00000567283 AK7Q96M32 723 aa33.78■■■■□ 3
RPUSD1-209ENST00000567283 HSPA5P11021 654 aaKnown RBP33.77■■■■□ 3
RPUSD1-209ENST00000567283 GOLGB1Q14789 3259 aaKnown RBP33.77■■■■□ 3
RPUSD1-209ENST00000567283 FLAD1Q8NFF5 587 aa33.76■■■□□ 2.99
RPUSD1-209ENST00000567283 PIGBQ92521 554 aa33.76■■■□□ 2.99
RPUSD1-209ENST00000567283 TMOD3Q9NYL9 352 aa33.75■■■□□ 2.99
RPUSD1-209ENST00000567283 UBR3Q6ZT12 1888 aa33.75■■■□□ 2.99
RPUSD1-209ENST00000567283 EIF4A2Q14240 407 aaKnown RBP33.74■■■□□ 2.99
RPUSD1-209ENST00000567283 NKX1-1Q15270 411 aaPredicted RBP33.74■■■□□ 2.99
RPUSD1-209ENST00000567283 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.73■■■□□ 2.99
RPUSD1-209ENST00000567283 PHF14O94880 888 aa33.71■■■□□ 2.99
RPUSD1-209ENST00000567283 IFNL2Q8IZJ0 200 aa33.71■■■□□ 2.99
RPUSD1-209ENST00000567283 PANK3Q9H999 370 aa33.71■■■□□ 2.99
RPUSD1-209ENST00000567283 PHKG2P15735 406 aa33.7■■■□□ 2.99
RPUSD1-209ENST00000567283 LOC102724428A0A0B4J2F2 783 aa33.67■■■□□ 2.98
RPUSD1-209ENST00000567283 SIK1P57059 783 aa33.67■■■□□ 2.98
RPUSD1-209ENST00000567283 PLEKHG2Q9H7P9 1386 aa33.64■■■□□ 2.98
RPUSD1-209ENST00000567283 IGSF1Q8N6C5 1336 aa33.64■■■□□ 2.98
RPUSD1-209ENST00000567283 ASAP1Q9ULH1 1129 aa33.64■■■□□ 2.98
RPUSD1-209ENST00000567283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.63■■■□□ 2.97
RPUSD1-209ENST00000567283 AMIGO3Q86WK7 504 aa33.63■■■□□ 2.97
RPUSD1-209ENST00000567283 LINC00116Q8NCU8 138 aa33.63■■■□□ 2.97
RPUSD1-209ENST00000567283 SMIM5Q71RC9 77 aa33.62■■■□□ 2.97
RPUSD1-209ENST00000567283 MORC1Q86VD1 984 aa33.61■■■□□ 2.97
RPUSD1-209ENST00000567283 YBX3P16989 372 aaKnown RBP eCLIP33.6■■■□□ 2.97
RPUSD1-209ENST00000567283 SSFA2P28290 1259 aa33.6■■■□□ 2.97
RPUSD1-209ENST00000567283 ATP6V1AP38606 617 aa33.6■■■□□ 2.97
RPUSD1-209ENST00000567283 GNPATO15228 680 aa33.59■■■□□ 2.97
RPUSD1-209ENST00000567283 GRIN3BO60391 1043 aa33.59■■■□□ 2.97
RPUSD1-209ENST00000567283 CD2APQ9Y5K6 639 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms