RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LY75O60449 1722 aa21.92■■□□□ 1.1
PALB2-205ENST00000567003 HOXC9P31274 260 aa21.91■■□□□ 1.1
PALB2-205ENST00000567003 SLC27A3Q5K4L6 730 aa21.91■■□□□ 1.1
PALB2-205ENST00000567003 ANKRD36BQ8N2N9 1353 aa21.9■■□□□ 1.1
PALB2-205ENST00000567003 PELP1Q8IZL8 1130 aaKnown RBP21.9■■□□□ 1.1
PALB2-205ENST00000567003 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
PALB2-205ENST00000567003 TONSLQ96HA7 1378 aa21.89■■□□□ 1.1
PALB2-205ENST00000567003 POLD1P28340 1107 aa21.89■■□□□ 1.09
PALB2-205ENST00000567003 AMPHP49418 695 aa21.89■■□□□ 1.09
PALB2-205ENST00000567003 PIAS4Q8N2W9 510 aaPredicted RBP21.89■■□□□ 1.09
PALB2-205ENST00000567003 NLGN2Q8NFZ4 835 aa21.89■■□□□ 1.09
PALB2-205ENST00000567003 COG3Q96JB2 828 aa21.89■■□□□ 1.09
PALB2-205ENST00000567003 SLC16A10Q8TF71 515 aa21.88■■□□□ 1.09
PALB2-205ENST00000567003 TESK2Q96S53 571 aa21.88■■□□□ 1.09
PALB2-205ENST00000567003 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
PALB2-205ENST00000567003 USHBP1Q8N6Y0 703 aa21.87■■□□□ 1.09
PALB2-205ENST00000567003 ZCRB1Q8TBF4 217 aaKnown RBP21.87■■□□□ 1.09
PALB2-205ENST00000567003 ST20-MTHFSA0A0A6YYL1 179 aa21.86■■□□□ 1.09
PALB2-205ENST00000567003 RRS1Q15050 365 aaKnown RBP21.86■■□□□ 1.09
PALB2-205ENST00000567003 PUS7Q96PZ0 661 aaKnown RBP21.86■■□□□ 1.09
PALB2-205ENST00000567003 C1QTNF8P60827 252 aa21.85■■□□□ 1.09
PALB2-205ENST00000567003 CCNL1Q9UK58 526 aaPredicted RBP21.84■■□□□ 1.09
PALB2-205ENST00000567003 NBPF6Q5VWK0 638 aa21.83■■□□□ 1.09
PALB2-205ENST00000567003 NBPF4Q96M43 638 aa21.83■■□□□ 1.09
PALB2-205ENST00000567003 MSH5O43196 834 aa21.82■■□□□ 1.08
PALB2-205ENST00000567003 MSL1Q68DK7 614 aa21.82■■□□□ 1.08
PALB2-205ENST00000567003 COL23A1Q86Y22 540 aaPredicted RBP21.81■■□□□ 1.08
PALB2-205ENST00000567003 GGNBP2Q9H3C7 697 aa21.81■■□□□ 1.08
PALB2-205ENST00000567003 RTL1A6NKG5 1358 aa21.8■■□□□ 1.08
PALB2-205ENST00000567003 USP47Q96K76 1375 aa21.79■■□□□ 1.08
PALB2-205ENST00000567003 YBX3P16989 372 aaKnown RBP eCLIP21.79■■□□□ 1.08
PALB2-205ENST00000567003 C5P01031 1676 aa21.79■■□□□ 1.08
PALB2-205ENST00000567003 FYB1O15117 783 aa21.77■■□□□ 1.08
PALB2-205ENST00000567003 GIGYF1O75420 1035 aaPredicted RBP21.76■■□□□ 1.07
PALB2-205ENST00000567003 RAPGEF4Q8WZA2 1011 aa21.76■■□□□ 1.07
PALB2-205ENST00000567003 KIF20BQ96Q89 1820 aa21.76■■□□□ 1.07
PALB2-205ENST00000567003 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
PALB2-205ENST00000567003 SMG6Q86US8 1419 aaKnown RBP21.75■■□□□ 1.07
PALB2-205ENST00000567003 CEP350Q5VT06 3117 aa21.75■■□□□ 1.07
PALB2-205ENST00000567003 HSP90AB2PQ58FF8 381 aa21.75■■□□□ 1.07
PALB2-205ENST00000567003 TAF1LQ8IZX4 1826 aa21.75■■□□□ 1.07
PALB2-205ENST00000567003 TATP17735 454 aaPredicted RBP21.74■■□□□ 1.07
PALB2-205ENST00000567003 CGNL1Q0VF96 1302 aa21.72■■□□□ 1.07
PALB2-205ENST00000567003 PALLDQ8WX93 1383 aa21.72■■□□□ 1.07
PALB2-205ENST00000567003 ITGB4P16144 1822 aa21.71■■□□□ 1.07
PALB2-205ENST00000567003 MPRIPQ6WCQ1 1025 aa21.71■■□□□ 1.07
PALB2-205ENST00000567003 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
PALB2-205ENST00000567003 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
PALB2-205ENST00000567003 SMIM5Q71RC9 77 aa21.7■■□□□ 1.06
PALB2-205ENST00000567003 AMIGO3Q86WK7 504 aa21.7■■□□□ 1.06
PALB2-205ENST00000567003 INSRP06213 1382 aa21.7■■□□□ 1.06
PALB2-205ENST00000567003 CYP27B1O15528 508 aa21.69■■□□□ 1.06
PALB2-205ENST00000567003 TMF1P82094 1093 aa21.69■■□□□ 1.06
PALB2-205ENST00000567003 FLT4P35916 1363 aa21.69■■□□□ 1.06
PALB2-205ENST00000567003 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
PALB2-205ENST00000567003 PKD1L3Q7Z443 1732 aa21.67■■□□□ 1.06
PALB2-205ENST00000567003 GRIN3BO60391 1043 aa21.67■■□□□ 1.06
PALB2-205ENST00000567003 EMILIN1Q9Y6C2 1016 aa21.67■■□□□ 1.06
PALB2-205ENST00000567003 ATP10DQ9P241 1426 aa21.66■■□□□ 1.06
PALB2-205ENST00000567003 WWC3Q9ULE0 1092 aa21.66■■□□□ 1.06
PALB2-205ENST00000567003 UBR3Q6ZT12 1888 aa21.65■■□□□ 1.06
PALB2-205ENST00000567003 PHF14O94880 888 aa21.65■■□□□ 1.06
PALB2-205ENST00000567003 SLC24A1O60721 1099 aa21.64■■□□□ 1.05
PALB2-205ENST00000567003 NSD3Q9BZ95 1437 aa21.63■■□□□ 1.05
PALB2-205ENST00000567003 AK7Q96M32 723 aa21.63■■□□□ 1.05
PALB2-205ENST00000567003 CARD14Q9BXL6 1004 aa21.63■■□□□ 1.05
PALB2-205ENST00000567003 CD2APQ9Y5K6 639 aa21.63■■□□□ 1.05
PALB2-205ENST00000567003 PIGBQ92521 554 aa21.62■■□□□ 1.05
PALB2-205ENST00000567003 MAP2P11137 1827 aaKnown RBP21.62■■□□□ 1.05
PALB2-205ENST00000567003 PPM1GO15355 546 aaPredicted RBP21.61■■□□□ 1.05
PALB2-205ENST00000567003 FLAD1Q8NFF5 587 aa21.61■■□□□ 1.05
PALB2-205ENST00000567003 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
PALB2-205ENST00000567003 ZNF526Q8TF50 670 aaPredicted RBP21.6■■□□□ 1.05
PALB2-205ENST00000567003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.59■■□□□ 1.05
PALB2-205ENST00000567003 NCAPD2Q15021 1401 aa21.59■■□□□ 1.05
PALB2-205ENST00000567003 LINC00116Q8NCU8 138 aa21.59■■□□□ 1.05
PALB2-205ENST00000567003 SMARCC1Q92922 1105 aaPredicted RBP21.59■■□□□ 1.05
PALB2-205ENST00000567003 ANKRD26Q9UPS8 1709 aa21.59■■□□□ 1.05
PALB2-205ENST00000567003 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
PALB2-205ENST00000567003 ADCY9O60503 1353 aa21.57■■□□□ 1.04
PALB2-205ENST00000567003 LOC102724428A0A0B4J2F2 783 aa21.55■■□□□ 1.04
PALB2-205ENST00000567003 SIK1P57059 783 aa21.55■■□□□ 1.04
PALB2-205ENST00000567003 ITPK1Q13572 414 aa21.55■■□□□ 1.04
PALB2-205ENST00000567003 NKX1-1Q15270 411 aaPredicted RBP21.55■■□□□ 1.04
PALB2-205ENST00000567003 EYA1Q99502 592 aa21.55■■□□□ 1.04
PALB2-205ENST00000567003 GPBP1L1Q9HC44 474 aaPredicted RBP21.55■■□□□ 1.04
PALB2-205ENST00000567003 ASAP1Q9ULH1 1129 aa21.55■■□□□ 1.04
PALB2-205ENST00000567003 CDCA8Q53HL2 280 aa21.54■■□□□ 1.04
PALB2-205ENST00000567003 SPG7Q9UQ90 795 aa21.54■■□□□ 1.04
PALB2-205ENST00000567003 TMOD3Q9NYL9 352 aa21.53■■□□□ 1.04
PALB2-205ENST00000567003 GNPATO15228 680 aa21.52■■□□□ 1.04
PALB2-205ENST00000567003 SSFA2P28290 1259 aa21.52■■□□□ 1.04
PALB2-205ENST00000567003 WASHC2AQ641Q2 1341 aa21.51■■□□□ 1.03
PALB2-205ENST00000567003 PHKG2P15735 406 aa21.5■■□□□ 1.03
PALB2-205ENST00000567003 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
PALB2-205ENST00000567003 ATP6V1AP38606 617 aa21.5■■□□□ 1.03
PALB2-205ENST00000567003 ATG3Q9NT62 314 aa21.49■■□□□ 1.03
PALB2-205ENST00000567003 TNNT2P45379 298 aaPredicted RBP21.48■■□□□ 1.03
PALB2-205ENST00000567003 POLKQ9UBT6 870 aa21.48■■□□□ 1.03
PALB2-205ENST00000567003 KIAA1551Q9HCM1 1747 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms