RNA–Protein interactions for RNA: ENST00000566911.1

LPCAT2-207, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 2

Gene LPCAT2, Length 832 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-207ENST00000566911 SMG6Q86US8 1419 aaKnown RBP28.56■■■□□ 2.16
LPCAT2-207ENST00000566911 USHBP1Q8N6Y0 703 aa28.56■■■□□ 2.16
LPCAT2-207ENST00000566911 RAPGEF4Q8WZA2 1011 aa28.56■■■□□ 2.16
LPCAT2-207ENST00000566911 INSRP06213 1382 aa28.55■■■□□ 2.16
LPCAT2-207ENST00000566911 ZNF827Q17R98 1081 aa28.55■■■□□ 2.16
LPCAT2-207ENST00000566911 RGPD2P0DJD1 1756 aa28.55■■■□□ 2.16
LPCAT2-207ENST00000566911 MEGF6O75095 1541 aa28.54■■■□□ 2.16
LPCAT2-207ENST00000566911 KIF24Q5T7B8 1368 aa28.54■■■□□ 2.16
LPCAT2-207ENST00000566911 YY1P25490 414 aa28.54■■■□□ 2.16
LPCAT2-207ENST00000566911 FLT4P35916 1363 aa28.53■■■□□ 2.16
LPCAT2-207ENST00000566911 TATP17735 454 aaPredicted RBP28.53■■■□□ 2.16
LPCAT2-207ENST00000566911 AKT1S1Q96B36 256 aa28.53■■■□□ 2.16
LPCAT2-207ENST00000566911 SGIP1Q9BQI5 828 aa28.53■■■□□ 2.16
LPCAT2-207ENST00000566911 PAPPAQ13219 1627 aa28.51■■■□□ 2.15
LPCAT2-207ENST00000566911 NSD3Q9BZ95 1437 aa28.51■■■□□ 2.15
LPCAT2-207ENST00000566911 SYT17Q9BSW7 474 aa28.5■■■□□ 2.15
LPCAT2-207ENST00000566911 FHDC1Q9C0D6 1143 aaPredicted RBP28.5■■■□□ 2.15
LPCAT2-207ENST00000566911 ARXQ96QS3 562 aa28.48■■■□□ 2.15
LPCAT2-207ENST00000566911 EMILIN1Q9Y6C2 1016 aa28.48■■■□□ 2.15
LPCAT2-207ENST00000566911 KIF20BQ96Q89 1820 aa28.48■■■□□ 2.15
LPCAT2-207ENST00000566911 KCNQ4P56696 695 aa28.47■■■□□ 2.15
LPCAT2-207ENST00000566911 SLC16A10Q8TF71 515 aa28.47■■■□□ 2.15
LPCAT2-207ENST00000566911 MYOM1P52179 1685 aa28.47■■■□□ 2.15
LPCAT2-207ENST00000566911 NSD2O96028 1365 aa28.47■■■□□ 2.15
LPCAT2-207ENST00000566911 TFCP2L1Q9NZI6 479 aa28.46■■■□□ 2.15
LPCAT2-207ENST00000566911 SHANK3Q9BYB0 1731 aa28.44■■■□□ 2.14
LPCAT2-207ENST00000566911 PPM1GO15355 546 aaPredicted RBP28.44■■■□□ 2.14
LPCAT2-207ENST00000566911 POLR3GLQ9BT43 218 aa28.44■■■□□ 2.14
LPCAT2-207ENST00000566911 CCNL1Q9UK58 526 aaPredicted RBP28.44■■■□□ 2.14
LPCAT2-207ENST00000566911 PCDH11XQ9BZA7 1347 aa28.43■■■□□ 2.14
LPCAT2-207ENST00000566911 PCDH11YQ9BZA8 1340 aa28.43■■■□□ 2.14
LPCAT2-207ENST00000566911 DOT1LQ8TEK3 1739 aa28.43■■■□□ 2.14
LPCAT2-207ENST00000566911 PNPLA7Q6ZV29 1317 aa28.42■■■□□ 2.14
LPCAT2-207ENST00000566911 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
LPCAT2-207ENST00000566911 CYP27B1O15528 508 aa28.39■■■□□ 2.14
LPCAT2-207ENST00000566911 HMGB2P26583 209 aaKnown RBP28.38■■■□□ 2.13
LPCAT2-207ENST00000566911 POLD1P28340 1107 aa28.38■■■□□ 2.13
LPCAT2-207ENST00000566911 EIF4G2P78344 907 aaKnown RBP eCLIP28.38■■■□□ 2.13
LPCAT2-207ENST00000566911 LY75O60449 1722 aa28.38■■■□□ 2.13
LPCAT2-207ENST00000566911 MPRIPQ6WCQ1 1025 aa28.37■■■□□ 2.13
LPCAT2-207ENST00000566911 POLKQ9UBT6 870 aa28.37■■■□□ 2.13
LPCAT2-207ENST00000566911 MAP3K5Q99683 1374 aa28.36■■■□□ 2.13
LPCAT2-207ENST00000566911 EYA1Q99502 592 aa28.35■■■□□ 2.13
LPCAT2-207ENST00000566911 SPG7Q9UQ90 795 aa28.35■■■□□ 2.13
LPCAT2-207ENST00000566911 QSER1Q2KHR3 1735 aa28.34■■■□□ 2.13
LPCAT2-207ENST00000566911 HSPA5P11021 654 aaKnown RBP28.33■■■□□ 2.13
LPCAT2-207ENST00000566911 NKX1-1Q15270 411 aaPredicted RBP28.32■■■□□ 2.12
LPCAT2-207ENST00000566911 CCER1Q8TC90 406 aaPredicted RBP28.32■■■□□ 2.12
LPCAT2-207ENST00000566911 NCAPD2Q15021 1401 aa28.32■■■□□ 2.12
LPCAT2-207ENST00000566911 MSH5O43196 834 aa28.31■■■□□ 2.12
LPCAT2-207ENST00000566911 COL23A1Q86Y22 540 aaPredicted RBP28.31■■■□□ 2.12
LPCAT2-207ENST00000566911 SMARCC1Q92922 1105 aaPredicted RBP28.31■■■□□ 2.12
LPCAT2-207ENST00000566911 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.31■■■□□ 2.12
LPCAT2-207ENST00000566911 MAP2P11137 1827 aaKnown RBP28.31■■■□□ 2.12
LPCAT2-207ENST00000566911 TNNT2P45379 298 aaPredicted RBP28.3■■■□□ 2.12
LPCAT2-207ENST00000566911 PANK3Q9H999 370 aa28.3■■■□□ 2.12
LPCAT2-207ENST00000566911 PALLDQ8WX93 1383 aa28.29■■■□□ 2.12
LPCAT2-207ENST00000566911 KLHL34Q8N239 644 aa28.29■■■□□ 2.12
LPCAT2-207ENST00000566911 PIGBQ92521 554 aa28.27■■■□□ 2.12
LPCAT2-207ENST00000566911 UTRNP46939 3433 aa28.26■■■□□ 2.11
LPCAT2-207ENST00000566911 EIF4A2Q14240 407 aaKnown RBP28.26■■■□□ 2.11
LPCAT2-207ENST00000566911 FLAD1Q8NFF5 587 aa28.26■■■□□ 2.11
LPCAT2-207ENST00000566911 ANKRD26Q9UPS8 1709 aa28.26■■■□□ 2.11
LPCAT2-207ENST00000566911 TUBGCP6Q96RT7 1819 aa28.25■■■□□ 2.11
LPCAT2-207ENST00000566911 GPR162Q16538 588 aa28.24■■■□□ 2.11
LPCAT2-207ENST00000566911 IFNL2Q8IZJ0 200 aa28.24■■■□□ 2.11
LPCAT2-207ENST00000566911 COL24A1Q17RW2 1714 aa28.23■■■□□ 2.11
LPCAT2-207ENST00000566911 PKD1L3Q7Z443 1732 aa28.23■■■□□ 2.11
LPCAT2-207ENST00000566911 PHKG2P15735 406 aa28.21■■■□□ 2.11
LPCAT2-207ENST00000566911 TMOD3Q9NYL9 352 aa28.21■■■□□ 2.11
LPCAT2-207ENST00000566911 ITGB4P16144 1822 aa28.2■■■□□ 2.1
LPCAT2-207ENST00000566911 ZNF784Q8NCA9 323 aaPredicted RBP28.19■■■□□ 2.1
LPCAT2-207ENST00000566911 TOGARAM1Q9Y4F4 1720 aa28.18■■■□□ 2.1
LPCAT2-207ENST00000566911 MSL1Q68DK7 614 aa28.18■■■□□ 2.1
LPCAT2-207ENST00000566911 AK7Q96M32 723 aa28.18■■■□□ 2.1
LPCAT2-207ENST00000566911 C5P01031 1676 aa28.17■■■□□ 2.1
LPCAT2-207ENST00000566911 LOC102724428A0A0B4J2F2 783 aa28.17■■■□□ 2.1
LPCAT2-207ENST00000566911 SIK1P57059 783 aa28.17■■■□□ 2.1
LPCAT2-207ENST00000566911 MORC1Q86VD1 984 aa28.17■■■□□ 2.1
LPCAT2-207ENST00000566911 NLGN2Q8NFZ4 835 aa28.17■■■□□ 2.1
LPCAT2-207ENST00000566911 IGSF1Q8N6C5 1336 aa28.16■■■□□ 2.1
LPCAT2-207ENST00000566911 PLEKHG2Q9H7P9 1386 aa28.15■■■□□ 2.1
LPCAT2-207ENST00000566911 PELP1Q8IZL8 1130 aaKnown RBP28.15■■■□□ 2.1
LPCAT2-207ENST00000566911 ASAP1Q9ULH1 1129 aa28.15■■■□□ 2.1
LPCAT2-207ENST00000566911 KNSTRNQ9Y448 316 aa28.14■■■□□ 2.1
LPCAT2-207ENST00000566911 TAF1LQ8IZX4 1826 aa28.13■■■□□ 2.09
LPCAT2-207ENST00000566911 PLEKHO1Q53GL0 409 aaPredicted RBP28.13■■■□□ 2.09
LPCAT2-207ENST00000566911 CHD4Q14839 1912 aa28.13■■■□□ 2.09
LPCAT2-207ENST00000566911 ATG3Q9NT62 314 aa28.12■■■□□ 2.09
LPCAT2-207ENST00000566911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.11■■■□□ 2.09
LPCAT2-207ENST00000566911 HSP90AB1P08238 724 aaKnown RBP28.11■■■□□ 2.09
LPCAT2-207ENST00000566911 ATP6V1AP38606 617 aa28.11■■■□□ 2.09
LPCAT2-207ENST00000566911 LINC00116Q8NCU8 138 aa28.11■■■□□ 2.09
LPCAT2-207ENST00000566911 C4BP0C0L5 1744 aa28.11■■■□□ 2.09
LPCAT2-207ENST00000566911 ERVV-2B6SEH9 535 aa28.1■■■□□ 2.09
LPCAT2-207ENST00000566911 PHF14O94880 888 aa28.1■■■□□ 2.09
LPCAT2-207ENST00000566911 AMIGO3Q86WK7 504 aa28.1■■■□□ 2.09
LPCAT2-207ENST00000566911 CD2APQ9Y5K6 639 aa28.1■■■□□ 2.09
LPCAT2-207ENST00000566911 SSFA2P28290 1259 aa28.09■■■□□ 2.09
LPCAT2-207ENST00000566911 AMOTQ4VCS5 1084 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms