RNA–Protein interactions for RNA: ENST00000566875.2

HMGN2P40-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 40, humanhuman

BASIC

Gene HMGN2P40, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P40-201ENST00000566875 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
HMGN2P40-201ENST00000566875 ANO8Q9HCE9 1232 aaPredicted RBP13.91□□□□□ -0.18
HMGN2P40-201ENST00000566875 LTN1O94822 1766 aa13.91□□□□□ -0.18
HMGN2P40-201ENST00000566875 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
HMGN2P40-201ENST00000566875 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
HMGN2P40-201ENST00000566875 MORC1Q86VD1 984 aa13.89□□□□□ -0.19
HMGN2P40-201ENST00000566875 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
HMGN2P40-201ENST00000566875 SBF2Q86WG5 1849 aa13.88□□□□□ -0.19
HMGN2P40-201ENST00000566875 DCAF8L1A6NGE4 600 aa13.88□□□□□ -0.19
HMGN2P40-201ENST00000566875 EYA1Q99502 592 aa13.88□□□□□ -0.19
HMGN2P40-201ENST00000566875 LRRC4BQ9NT99 713 aa13.88□□□□□ -0.19
HMGN2P40-201ENST00000566875 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.88□□□□□ -0.19
HMGN2P40-201ENST00000566875 ZBTB7AO95365 584 aa13.87□□□□□ -0.19
HMGN2P40-201ENST00000566875 PDGFDQ9GZP0 370 aaPredicted RBP13.87□□□□□ -0.19
HMGN2P40-201ENST00000566875 ATF5Q9Y2D1 282 aaPredicted RBP13.87□□□□□ -0.19
HMGN2P40-201ENST00000566875 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
HMGN2P40-201ENST00000566875 PCDH11YQ9BZA8 1340 aa13.87□□□□□ -0.19
HMGN2P40-201ENST00000566875 MTFR1LQ9H019 292 aa13.86□□□□□ -0.19
HMGN2P40-201ENST00000566875 CYP27B1O15528 508 aa13.85□□□□□ -0.19
HMGN2P40-201ENST00000566875 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
HMGN2P40-201ENST00000566875 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
HMGN2P40-201ENST00000566875 SLC16A10Q8TF71 515 aa13.85□□□□□ -0.19
HMGN2P40-201ENST00000566875 LRP5O75197 1615 aa13.85□□□□□ -0.19
HMGN2P40-201ENST00000566875 EIF4A2Q14240 407 aaKnown RBP13.84□□□□□ -0.19
HMGN2P40-201ENST00000566875 AKT1S1Q96B36 256 aa13.84□□□□□ -0.19
HMGN2P40-201ENST00000566875 TFCP2L1Q9NZI6 479 aa13.84□□□□□ -0.19
HMGN2P40-201ENST00000566875 NSD2O96028 1365 aa13.83□□□□□ -0.19
HMGN2P40-201ENST00000566875 RREB1Q92766 1687 aa13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 IFNL2Q8IZJ0 200 aa13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 SMARCC1Q92922 1105 aaPredicted RBP13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 CCNL1Q9UK58 526 aaPredicted RBP13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 MEGF6O75095 1541 aa13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 WNK3Q9BYP7 1800 aa13.83□□□□□ -0.2
HMGN2P40-201ENST00000566875 NUP188Q5SRE5 1749 aa13.82□□□□□ -0.2
HMGN2P40-201ENST00000566875 PTGER2P43116 358 aa13.82□□□□□ -0.2
HMGN2P40-201ENST00000566875 KCNQ4P56696 695 aa13.82□□□□□ -0.2
HMGN2P40-201ENST00000566875 FAM208AQ9UK61 1670 aaKnown RBP13.82□□□□□ -0.2
HMGN2P40-201ENST00000566875 RGPD3A6NKT7 1758 aaPredicted RBP13.81□□□□□ -0.2
HMGN2P40-201ENST00000566875 RGPD4Q7Z3J3 1758 aa13.81□□□□□ -0.2
HMGN2P40-201ENST00000566875 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
HMGN2P40-201ENST00000566875 PLEKHO1Q53GL0 409 aaPredicted RBP13.81□□□□□ -0.2
HMGN2P40-201ENST00000566875 KIF7Q2M1P5 1343 aa13.81□□□□□ -0.2
HMGN2P40-201ENST00000566875 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
HMGN2P40-201ENST00000566875 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
HMGN2P40-201ENST00000566875 PIGBQ92521 554 aa13.8□□□□□ -0.2
HMGN2P40-201ENST00000566875 HSP90AB1P08238 724 aaKnown RBP13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 PHKG2P15735 406 aa13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 AMOTQ4VCS5 1084 aa13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 FLAD1Q8NFF5 587 aa13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 ARXQ96QS3 562 aa13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
HMGN2P40-201ENST00000566875 POLD1P28340 1107 aa13.78□□□□□ -0.2
HMGN2P40-201ENST00000566875 SGIP1Q9BQI5 828 aa13.78□□□□□ -0.2
HMGN2P40-201ENST00000566875 SYT17Q9BSW7 474 aa13.78□□□□□ -0.2
HMGN2P40-201ENST00000566875 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
HMGN2P40-201ENST00000566875 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.21
HMGN2P40-201ENST00000566875 IGSF1Q8N6C5 1336 aa13.77□□□□□ -0.21
HMGN2P40-201ENST00000566875 KIF20BQ96Q89 1820 aa13.77□□□□□ -0.21
HMGN2P40-201ENST00000566875 MAP2P11137 1827 aaKnown RBP13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 RGPD2P0DJD1 1756 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 MYOM1P52179 1685 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 MTHFSP49914 203 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 DCAF5Q96JK2 942 aa13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
HMGN2P40-201ENST00000566875 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
HMGN2P40-201ENST00000566875 PNPLA7Q6ZV29 1317 aa13.75□□□□□ -0.21
HMGN2P40-201ENST00000566875 IL13P35225 146 aa13.75□□□□□ -0.21
HMGN2P40-201ENST00000566875 BTAF1O14981 1849 aa13.75□□□□□ -0.21
HMGN2P40-201ENST00000566875 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 SIK1P57059 783 aa13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 CC2D1BQ5T0F9 858 aaKnown RBP13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 COL23A1Q86Y22 540 aaPredicted RBP13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
HMGN2P40-201ENST00000566875 C1orf141Q5JVX7 400 aa13.73□□□□□ -0.21
HMGN2P40-201ENST00000566875 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
HMGN2P40-201ENST00000566875 ATG3Q9NT62 314 aa13.73□□□□□ -0.21
HMGN2P40-201ENST00000566875 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
HMGN2P40-201ENST00000566875 CABP4P57796 275 aa13.72□□□□□ -0.21
HMGN2P40-201ENST00000566875 AK7Q96M32 723 aa13.72□□□□□ -0.21
HMGN2P40-201ENST00000566875 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
HMGN2P40-201ENST00000566875 AEBP1Q8IUX7 1158 aa13.71□□□□□ -0.21
HMGN2P40-201ENST00000566875 YY1P25490 414 aa13.7□□□□□ -0.22
HMGN2P40-201ENST00000566875 NFATC2IPQ8NCF5 419 aa13.69□□□□□ -0.22
HMGN2P40-201ENST00000566875 NPC1L1Q9UHC9 1359 aa13.69□□□□□ -0.22
HMGN2P40-201ENST00000566875 CASZ1Q86V15 1759 aa13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 CNGB1Q14028 1251 aaPredicted RBP13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 KLHL34Q8N239 644 aa13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
HMGN2P40-201ENST00000566875 SSFA2P28290 1259 aa13.67□□□□□ -0.22
HMGN2P40-201ENST00000566875 GPR162Q16538 588 aa13.67□□□□□ -0.22
HMGN2P40-201ENST00000566875 RC3H1Q5TC82 1133 aaKnown RBP13.67□□□□□ -0.22
HMGN2P40-201ENST00000566875 LINC00116Q8NCU8 138 aa13.67□□□□□ -0.22
HMGN2P40-201ENST00000566875 MAP3K5Q99683 1374 aa13.67□□□□□ -0.22
HMGN2P40-201ENST00000566875 PAPPAQ13219 1627 aa13.66□□□□□ -0.22
HMGN2P40-201ENST00000566875 HMOX1P09601 288 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms