RNA–Protein interactions for RNA: ENST00000566828.5

EDC3-212, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-212ENST00000566828 POLD1P28340 1107 aa22.95■■□□□ 1.26
EDC3-212ENST00000566828 SLC16A10Q8TF71 515 aa22.94■■□□□ 1.26
EDC3-212ENST00000566828 IP6K1Q92551 441 aa22.94■■□□□ 1.26
EDC3-212ENST00000566828 TERF2IPQ9NYB0 399 aa22.94■■□□□ 1.26
EDC3-212ENST00000566828 GOLGB1Q14789 3259 aaKnown RBP22.93■■□□□ 1.26
EDC3-212ENST00000566828 NLGN2Q8NFZ4 835 aa22.93■■□□□ 1.26
EDC3-212ENST00000566828 TFCP2L1Q9NZI6 479 aa22.93■■□□□ 1.26
EDC3-212ENST00000566828 PRIM1P49642 420 aaKnown RBP22.91■■□□□ 1.26
EDC3-212ENST00000566828 TAF1LQ8IZX4 1826 aa22.91■■□□□ 1.26
EDC3-212ENST00000566828 MAP3K19Q56UN5 1328 aa22.9■■□□□ 1.26
EDC3-212ENST00000566828 GIGYF1O75420 1035 aaPredicted RBP22.89■■□□□ 1.25
EDC3-212ENST00000566828 KIF20BQ96Q89 1820 aa22.88■■□□□ 1.25
EDC3-212ENST00000566828 HOXC9P31274 260 aa22.88■■□□□ 1.25
EDC3-212ENST00000566828 CCNL1Q9UK58 526 aaPredicted RBP22.87■■□□□ 1.25
EDC3-212ENST00000566828 TOGARAM1Q9Y4F4 1720 aa22.86■■□□□ 1.25
EDC3-212ENST00000566828 FBLN1P23142 703 aa22.86■■□□□ 1.25
EDC3-212ENST00000566828 COG3Q96JB2 828 aa22.86■■□□□ 1.25
EDC3-212ENST00000566828 AMPHP49418 695 aa22.85■■□□□ 1.25
EDC3-212ENST00000566828 RTL1A6NKG5 1358 aa22.85■■□□□ 1.25
EDC3-212ENST00000566828 MSH5O43196 834 aa22.84■■□□□ 1.25
EDC3-212ENST00000566828 ZCRB1Q8TBF4 217 aaKnown RBP22.84■■□□□ 1.25
EDC3-212ENST00000566828 USP47Q96K76 1375 aa22.84■■□□□ 1.25
EDC3-212ENST00000566828 ITGB4P16144 1822 aa22.83■■□□□ 1.25
EDC3-212ENST00000566828 YBX3P16989 372 aaKnown RBP eCLIP22.83■■□□□ 1.25
EDC3-212ENST00000566828 TONSLQ96HA7 1378 aa22.83■■□□□ 1.25
EDC3-212ENST00000566828 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
EDC3-212ENST00000566828 PUS7Q96PZ0 661 aaKnown RBP22.82■■□□□ 1.24
EDC3-212ENST00000566828 COL23A1Q86Y22 540 aaPredicted RBP22.81■■□□□ 1.24
EDC3-212ENST00000566828 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
EDC3-212ENST00000566828 C4BP0C0L5 1744 aa22.81■■□□□ 1.24
EDC3-212ENST00000566828 SMG6Q86US8 1419 aaKnown RBP22.8■■□□□ 1.24
EDC3-212ENST00000566828 PKD1L3Q7Z443 1732 aa22.79■■□□□ 1.24
EDC3-212ENST00000566828 RRS1Q15050 365 aaKnown RBP22.79■■□□□ 1.24
EDC3-212ENST00000566828 TESK2Q96S53 571 aa22.79■■□□□ 1.24
EDC3-212ENST00000566828 UBR3Q6ZT12 1888 aa22.79■■□□□ 1.24
EDC3-212ENST00000566828 ATP10DQ9P241 1426 aa22.77■■□□□ 1.24
EDC3-212ENST00000566828 NBPF6Q5VWK0 638 aa22.77■■□□□ 1.24
EDC3-212ENST00000566828 NBPF4Q96M43 638 aa22.77■■□□□ 1.24
EDC3-212ENST00000566828 PALLDQ8WX93 1383 aa22.76■■□□□ 1.23
EDC3-212ENST00000566828 ST20-MTHFSA0A0A6YYL1 179 aa22.75■■□□□ 1.23
EDC3-212ENST00000566828 GRIN3BO60391 1043 aa22.75■■□□□ 1.23
EDC3-212ENST00000566828 RAPGEF4Q8WZA2 1011 aa22.75■■□□□ 1.23
EDC3-212ENST00000566828 GGNBP2Q9H3C7 697 aa22.74■■□□□ 1.23
EDC3-212ENST00000566828 CGNL1Q0VF96 1302 aa22.74■■□□□ 1.23
EDC3-212ENST00000566828 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
EDC3-212ENST00000566828 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
EDC3-212ENST00000566828 ANKRD26Q9UPS8 1709 aa22.72■■□□□ 1.23
EDC3-212ENST00000566828 MAP2P11137 1827 aaKnown RBP22.71■■□□□ 1.23
EDC3-212ENST00000566828 TATP17735 454 aaPredicted RBP22.71■■□□□ 1.23
EDC3-212ENST00000566828 CEP350Q5VT06 3117 aa22.7■■□□□ 1.22
EDC3-212ENST00000566828 ADCY9O60503 1353 aa22.69■■□□□ 1.22
EDC3-212ENST00000566828 INSRP06213 1382 aa22.69■■□□□ 1.22
EDC3-212ENST00000566828 FLT4P35916 1363 aa22.69■■□□□ 1.22
EDC3-212ENST00000566828 FYB1O15117 783 aa22.69■■□□□ 1.22
EDC3-212ENST00000566828 MPRIPQ6WCQ1 1025 aa22.68■■□□□ 1.22
EDC3-212ENST00000566828 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
EDC3-212ENST00000566828 CD2APQ9Y5K6 639 aa22.67■■□□□ 1.22
EDC3-212ENST00000566828 AMIGO3Q86WK7 504 aa22.66■■□□□ 1.22
EDC3-212ENST00000566828 CYP27B1O15528 508 aa22.65■■□□□ 1.22
EDC3-212ENST00000566828 FLAD1Q8NFF5 587 aa22.65■■□□□ 1.22
EDC3-212ENST00000566828 ZNF526Q8TF50 670 aaPredicted RBP22.65■■□□□ 1.22
EDC3-212ENST00000566828 AK7Q96M32 723 aa22.65■■□□□ 1.22
EDC3-212ENST00000566828 WWC3Q9ULE0 1092 aa22.65■■□□□ 1.22
EDC3-212ENST00000566828 PHF14O94880 888 aa22.64■■□□□ 1.21
EDC3-212ENST00000566828 SMIM5Q71RC9 77 aa22.64■■□□□ 1.21
EDC3-212ENST00000566828 GPBP1L1Q9HC44 474 aaPredicted RBP22.64■■□□□ 1.21
EDC3-212ENST00000566828 IFFO2Q5TF58 517 aa22.63■■□□□ 1.21
EDC3-212ENST00000566828 CICQ96RK0 1608 aaPredicted RBP22.63■■□□□ 1.21
EDC3-212ENST00000566828 NCAPD2Q15021 1401 aa22.63■■□□□ 1.21
EDC3-212ENST00000566828 NSD3Q9BZ95 1437 aa22.63■■□□□ 1.21
EDC3-212ENST00000566828 KIF24Q5T7B8 1368 aa22.63■■□□□ 1.21
EDC3-212ENST00000566828 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
EDC3-212ENST00000566828 IGSF1Q8N6C5 1336 aa22.62■■□□□ 1.21
EDC3-212ENST00000566828 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
EDC3-212ENST00000566828 SLC24A1O60721 1099 aa22.6■■□□□ 1.21
EDC3-212ENST00000566828 TMF1P82094 1093 aa22.6■■□□□ 1.21
EDC3-212ENST00000566828 SMARCC1Q92922 1105 aaPredicted RBP22.6■■□□□ 1.21
EDC3-212ENST00000566828 N4BP2Q86UW6 1770 aaPredicted RBP22.6■■□□□ 1.21
EDC3-212ENST00000566828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.59■■□□□ 1.21
EDC3-212ENST00000566828 EMILIN1Q9Y6C2 1016 aa22.59■■□□□ 1.21
EDC3-212ENST00000566828 HMGB2P26583 209 aaKnown RBP22.58■■□□□ 1.21
EDC3-212ENST00000566828 PIGBQ92521 554 aa22.58■■□□□ 1.21
EDC3-212ENST00000566828 LINC00116Q8NCU8 138 aa22.56■■□□□ 1.2
EDC3-212ENST00000566828 COL5A3P25940 1745 aaPredicted RBP22.55■■□□□ 1.2
EDC3-212ENST00000566828 SSFA2P28290 1259 aa22.55■■□□□ 1.2
EDC3-212ENST00000566828 LOC102724428A0A0B4J2F2 783 aa22.54■■□□□ 1.2
EDC3-212ENST00000566828 HSPA6P17066 643 aa22.54■■□□□ 1.2
EDC3-212ENST00000566828 SIK1P57059 783 aa22.54■■□□□ 1.2
EDC3-212ENST00000566828 C4AP0C0L4 1744 aa22.54■■□□□ 1.2
EDC3-212ENST00000566828 PPM1GO15355 546 aaPredicted RBP22.53■■□□□ 1.2
EDC3-212ENST00000566828 PXDNLA1KZ92 1463 aa22.53■■□□□ 1.2
EDC3-212ENST00000566828 BRCA1P38398 1863 aaKnown RBP22.52■■□□□ 1.2
EDC3-212ENST00000566828 GNPATO15228 680 aa22.52■■□□□ 1.2
EDC3-212ENST00000566828 NKX1-1Q15270 411 aaPredicted RBP22.52■■□□□ 1.2
EDC3-212ENST00000566828 SPG7Q9UQ90 795 aa22.52■■□□□ 1.2
EDC3-212ENST00000566828 ZNF831Q5JPB2 1677 aa22.52■■□□□ 1.2
EDC3-212ENST00000566828 ITPK1Q13572 414 aa22.51■■□□□ 1.19
EDC3-212ENST00000566828 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
EDC3-212ENST00000566828 TMOD3Q9NYL9 352 aa22.51■■□□□ 1.19
EDC3-212ENST00000566828 ASAP1Q9ULH1 1129 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms