RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 KDRP35968 1356 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 BCL11AQ9H165 835 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 IL16Q14005 1332 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 RTL1A6NKG5 1358 aa13.82□□□□□ -0.2
PDXDC1-214ENST00000566633 C8orf34Q49A92 452 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 MBIPQ9NS73 344 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 RGS3P49796 1198 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 TSPYL6Q8N831 410 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 KIAA0232Q92628 1395 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 SLIT3O75094 1523 aa13.81□□□□□ -0.2
PDXDC1-214ENST00000566633 LTN1O94822 1766 aa13.8□□□□□ -0.2
PDXDC1-214ENST00000566633 CSB-PGBD3P0DP91 1061 aa13.8□□□□□ -0.2
PDXDC1-214ENST00000566633 PIP4K2BP78356 416 aa13.8□□□□□ -0.2
PDXDC1-214ENST00000566633 KRT24Q2M2I5 525 aa13.8□□□□□ -0.2
PDXDC1-214ENST00000566633 NLRP2Q9NX02 1062 aa13.8□□□□□ -0.2
PDXDC1-214ENST00000566633 LMOD3Q0VAK6 560 aa13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 RTF1Q92541 710 aaKnown RBP13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 ERBB3P21860 1342 aa13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 USP54Q70EL1 1684 aa13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 ALS2Q96Q42 1657 aa13.79□□□□□ -0.2
PDXDC1-214ENST00000566633 CFAP44Q96MT7 982 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 GNAI1P63096 354 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 ZKSCAN2Q63HK3 967 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 IFT57Q9NWB7 429 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 PCDHB15Q9Y5E8 787 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 ZNF853P0CG23 659 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
PDXDC1-214ENST00000566633 CALD1Q05682 793 aaKnown RBP13.77□□□□□ -0.21
PDXDC1-214ENST00000566633 IL17REQ8NFR9 667 aa13.77□□□□□ -0.21
PDXDC1-214ENST00000566633 SMC4Q9NTJ3 1288 aa13.77□□□□□ -0.21
PDXDC1-214ENST00000566633 GNAT3A8MTJ3 354 aa13.76□□□□□ -0.21
PDXDC1-214ENST00000566633 MVPQ14764 893 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-214ENST00000566633 DZIP1LQ8IYY4 767 aaKnown RBP13.76□□□□□ -0.21
PDXDC1-214ENST00000566633 DDRGK1Q96HY6 314 aa13.76□□□□□ -0.21
PDXDC1-214ENST00000566633 LGR6Q9HBX8 967 aa13.76□□□□□ -0.21
PDXDC1-214ENST00000566633 LTBP4Q8N2S1 1624 aa13.75□□□□□ -0.21
PDXDC1-214ENST00000566633 VAMP4O75379 141 aa13.75□□□□□ -0.21
PDXDC1-214ENST00000566633 NBR1Q14596 966 aa13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 MPRIPQ6WCQ1 1025 aa13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 STRN4Q9NRL3 753 aa13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 CHL1O00533 1208 aa13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 TWISTNBQ3B726 338 aaPredicted RBP13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 FTSJ3Q8IY81 847 aaKnown RBP13.74□□□□□ -0.21
PDXDC1-214ENST00000566633 DLG5Q8TDM6 1919 aa13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 TRIM27P14373 513 aa13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 ZNF530Q6P9A1 599 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 RWDD1Q9H446 243 aaPredicted RBP13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 TSPYL4Q9UJ04 414 aa13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 RGPD2P0DJD1 1756 aa13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 NOB1Q9ULX3 412 aaKnown RBP13.73□□□□□ -0.21
PDXDC1-214ENST00000566633 CRB1P82279 1406 aa13.72□□□□□ -0.21
PDXDC1-214ENST00000566633 ATF7IPQ6VMQ6 1270 aa13.72□□□□□ -0.21
PDXDC1-214ENST00000566633 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
PDXDC1-214ENST00000566633 TOM1L2Q6ZVM7 507 aa13.71□□□□□ -0.21
PDXDC1-214ENST00000566633 MAP3K5Q99683 1374 aa13.71□□□□□ -0.21
PDXDC1-214ENST00000566633 RGPD5Q99666 1765 aa13.71□□□□□ -0.22
PDXDC1-214ENST00000566633 ALDH1L2Q3SY69 923 aa13.71□□□□□ -0.22
PDXDC1-214ENST00000566633 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.22
PDXDC1-214ENST00000566633 PHRF1Q9P1Y6 1649 aaKnown RBP13.7□□□□□ -0.22
PDXDC1-214ENST00000566633 CPDO75976 1380 aa13.7□□□□□ -0.22
PDXDC1-214ENST00000566633 UBAP1LF5GYI3 381 aa13.7□□□□□ -0.22
PDXDC1-214ENST00000566633 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
PDXDC1-214ENST00000566633 EVA1CP58658 441 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 LARP1Q6PKG0 1096 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 NECTIN2Q92692 538 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 DDX19BQ9UMR2 479 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 ADAMTS2O95450 1211 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 C1orf141Q5JVX7 400 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
PDXDC1-214ENST00000566633 KIF16BQ96L93 1317 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 HTATSF1O43719 755 aaKnown RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 TOM1O60784 492 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 AMOTQ4VCS5 1084 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 AKAP4Q5JQC9 854 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 BTG4Q9NY30 223 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 NUTM2BA6NNL0 878 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 NUTM2EB1AL46 878 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 KCNQ3O43525 872 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 TATP17735 454 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 NUTM2AQ8IVF1 878 aaPredicted RBP13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 ITPRIPQ8IWB1 547 aa13.68□□□□□ -0.22
PDXDC1-214ENST00000566633 CAMTA1Q9Y6Y1 1673 aa13.67□□□□□ -0.22
PDXDC1-214ENST00000566633 TAF7Q15545 349 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-214ENST00000566633 HDAC1Q13547 482 aaPredicted RBP13.67□□□□□ -0.22
PDXDC1-214ENST00000566633 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
PDXDC1-214ENST00000566633 MRPL50Q8N5N7 158 aaKnown RBP13.67□□□□□ -0.22
PDXDC1-214ENST00000566633 VIRMAQ69YN4 1812 aaKnown RBP13.66□□□□□ -0.22
PDXDC1-214ENST00000566633 MEGF6O75095 1541 aa13.66□□□□□ -0.22
PDXDC1-214ENST00000566633 SEC24BO95487 1268 aa13.66□□□□□ -0.22
PDXDC1-214ENST00000566633 TEFQ10587 303 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms