RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CCDC155Q8N6L0 562 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 FOXJ1Q92949 421 aa5.15□□□□□ -1.59
HERPUD1-211ENST00000566550 CDC14CA4D256 554 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 UNCXA6NJT0 531 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 FIGNL2A6NMB9 653 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 AP1G2O75843 785 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 ARHGEF15O94989 841 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 GRM5P41594 1212 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 CDCA8Q53HL2 280 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 SPIRE2Q8WWL2 714 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 PGPEP1Q9NXJ5 209 aa5.14□□□□□ -1.59
HERPUD1-211ENST00000566550 MOXD2PA6NHM9 499 aa5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 NDUFV2P19404 249 aa5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 CFAP70Q5T0N1 1121 aa5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 VASH1Q7L8A9 365 aaPredicted RBP5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 RIC3Q7Z5B4 369 aa5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 VWA5B2Q8N398 1253 aa5.13□□□□□ -1.59
HERPUD1-211ENST00000566550 ADAM23O75077 832 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 FSHRP23945 695 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 LMOD1P29536 600 aaPredicted RBP5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 GJA5P36382 358 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 PODNQ7Z5L7 613 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 CCDC116Q8IYX3 515 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 GALNT6Q8NCL4 622 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 ADAMTS19Q8TE59 1207 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 VRTNQ9H8Y1 702 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 MAP4K5Q9Y4K4 846 aa5.12□□□□□ -1.59
HERPUD1-211ENST00000566550 EIF5BO60841 1220 aaKnown RBP5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 USP17L8P0C7I0 530 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 ITGA6P23229 1130 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 RNFT1Q5M7Z0 435 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 NBPF14Q5TI25 921 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 PPP2R2DQ66LE6 453 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 WHAMMQ8TF30 809 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 PPP1R12CQ9BZL4 782 aa5.11□□□□□ -1.59
HERPUD1-211ENST00000566550 SLC35F4A4IF30 521 aa5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 ADAMTS2O95450 1211 aa5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 VAC14Q08AM6 782 aa5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 FAM177A1Q8N128 213 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 BEND7Q8N7W2 519 aaPredicted RBP5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 MAP10Q9P2G4 905 aa5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 NDUFB9Q9Y6M9 179 aa5.1□□□□□ -1.59
HERPUD1-211ENST00000566550 PALM3A6NDB9 673 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 NUTM2BA6NNL0 878 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 NUTM2EB1AL46 878 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 SPINT1O43278 529 aa5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 F12P00748 615 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 SRSF11Q05519 484 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 DHX9Q08211 1270 aaKnown RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 QPCTQ16769 361 aa5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 NUTM2DQ5VT03 806 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 NUTM2AQ8IVF1 878 aaPredicted RBP5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 ZBTB3Q9H5J0 574 aa5.09□□□□□ -1.59
HERPUD1-211ENST00000566550 PLA2G4EQ3MJ16 856 aa5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 FOXR1Q6PIV2 292 aa5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 LYPD4Q6UWN0 246 aa5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 TRMT44Q8IYL2 757 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 MRRFQ96E11 262 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 CDV3Q9UKY7 258 aaKnown RBP5.08□□□□□ -1.6
HERPUD1-211ENST00000566550 MAGEB6P1A0A0J9YX57 407 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 TMEM88BA6NKF7 163 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 CELA2BP08218 269 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 SRPK2P78362 688 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 C4orf48Q5BLP8 95 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 RTL5Q5HYW3 569 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 PRPF38BQ5VTL8 546 aaKnown RBP5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 RSBN1LQ6PCB5 846 aaPredicted RBP5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 Q6ZVU0 165 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 NEDD1Q8NHV4 660 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 CABLES1Q8TDN4 633 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 DCAF5Q96JK2 942 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 SPOCK3Q9BQ16 436 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 C1QTNF2Q9BXJ5 285 aa5.07□□□□□ -1.6
HERPUD1-211ENST00000566550 K7ELQ4 463 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 WASHC4Q2M389 1173 aa5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 PPP1R26Q5T8A7 1209 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 B4GALNT3Q6L9W6 998 aa5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 TSC1Q92574 1164 aa5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 GPKOWQ92917 476 aaPredicted RBP eCLIP5.06□□□□□ -1.63e-11■■■■■ 35.9
HERPUD1-211ENST00000566550 TRIM52Q96A61 297 aa5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 CHMP4AQ9BY43 222 aa5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 POLMQ9NP87 494 aaPredicted RBP5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 TFIP11Q9UBB9 837 aaKnown RBP5.06□□□□□ -1.6
HERPUD1-211ENST00000566550 RBM47A0AV96 593 aaKnown RBP5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 CFAP99D6REC4 459 aa5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 SH3RF1Q7Z6J0 888 aa5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 GMCL1Q96IK5 515 aa5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 GJD4Q96KN9 370 aaPredicted RBP5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 KIAA1522Q9P206 1035 aaPredicted RBP5.05□□□□□ -1.6
HERPUD1-211ENST00000566550 SOCS7O14512 581 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 PPM1GO15355 546 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 ATG7O95352 703 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 CBLBQ13191 982 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 CCER1Q8TC90 406 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 UCN2Q96RP3 112 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 BCL2L13Q9BXK5 485 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 CARD14Q9BXL6 1004 aa5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 HMX1Q9NP08 348 aaPredicted RBP5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 NSFL1CQ9UNZ2 370 aaKnown RBP5.04□□□□□ -1.6
HERPUD1-211ENST00000566550 PCDHB15Q9Y5E8 787 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms