RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 CGNL1Q0VF96 1302 aa18.51■□□□□ 0.55
HACD3-208ENST00000566239 ZCRB1Q8TBF4 217 aaKnown RBP18.51■□□□□ 0.55
HACD3-208ENST00000566239 DCAF8L1A6NGE4 600 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 ZBTB7AO95365 584 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 NBPF6Q5VWK0 638 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 NBPF4Q96M43 638 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
HACD3-208ENST00000566239 PDGFDQ9GZP0 370 aaPredicted RBP18.5■□□□□ 0.55
HACD3-208ENST00000566239 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
HACD3-208ENST00000566239 TUBGCP6Q96RT7 1819 aa18.49■□□□□ 0.55
HACD3-208ENST00000566239 USHBP1Q8N6Y0 703 aa18.48■□□□□ 0.55
HACD3-208ENST00000566239 PKD1L3Q7Z443 1732 aa18.47■□□□□ 0.55
HACD3-208ENST00000566239 TATP17735 454 aaPredicted RBP18.47■□□□□ 0.55
HACD3-208ENST00000566239 HSP90AB2PQ58FF8 381 aa18.47■□□□□ 0.55
HACD3-208ENST00000566239 SLC27A3Q5K4L6 730 aa18.47■□□□□ 0.55
HACD3-208ENST00000566239 ITGB4P16144 1822 aa18.46■□□□□ 0.55
HACD3-208ENST00000566239 PRIM1P49642 420 aaKnown RBP18.46■□□□□ 0.55
HACD3-208ENST00000566239 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
HACD3-208ENST00000566239 MTFR1LQ9H019 292 aa18.46■□□□□ 0.55
HACD3-208ENST00000566239 ATF5Q9Y2D1 282 aaPredicted RBP18.46■□□□□ 0.55
HACD3-208ENST00000566239 EIF4G2P78344 907 aaKnown RBP eCLIP18.45■□□□□ 0.54
HACD3-208ENST00000566239 CCER1Q8TC90 406 aaPredicted RBP18.45■□□□□ 0.54
HACD3-208ENST00000566239 PTGER2P43116 358 aa18.44■□□□□ 0.54
HACD3-208ENST00000566239 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
HACD3-208ENST00000566239 PCDH11XQ9BZA7 1347 aa18.44■□□□□ 0.54
HACD3-208ENST00000566239 PCDH11YQ9BZA8 1340 aa18.44■□□□□ 0.54
HACD3-208ENST00000566239 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
HACD3-208ENST00000566239 EMILIN1Q9Y6C2 1016 aa18.43■□□□□ 0.54
HACD3-208ENST00000566239 C5P01031 1676 aa18.43■□□□□ 0.54
HACD3-208ENST00000566239 COL24A1Q17RW2 1714 aa18.43■□□□□ 0.54
HACD3-208ENST00000566239 NSD2O96028 1365 aa18.42■□□□□ 0.54
HACD3-208ENST00000566239 TAF1LQ8IZX4 1826 aa18.42■□□□□ 0.54
HACD3-208ENST00000566239 ZNF827Q17R98 1081 aa18.42■□□□□ 0.54
HACD3-208ENST00000566239 TOGARAM1Q9Y4F4 1720 aa18.41■□□□□ 0.54
HACD3-208ENST00000566239 AKT1S1Q96B36 256 aa18.4■□□□□ 0.54
HACD3-208ENST00000566239 WASHC2AQ641Q2 1341 aa18.4■□□□□ 0.54
HACD3-208ENST00000566239 HSPA5P11021 654 aaKnown RBP18.39■□□□□ 0.53
HACD3-208ENST00000566239 CCNL1Q9UK58 526 aaPredicted RBP18.39■□□□□ 0.53
HACD3-208ENST00000566239 NCAPD2Q15021 1401 aa18.39■□□□□ 0.53
HACD3-208ENST00000566239 HMGB2P26583 209 aaKnown RBP18.38■□□□□ 0.53
HACD3-208ENST00000566239 SLC16A10Q8TF71 515 aa18.38■□□□□ 0.53
HACD3-208ENST00000566239 SGIP1Q9BQI5 828 aa18.38■□□□□ 0.53
HACD3-208ENST00000566239 TFCP2L1Q9NZI6 479 aa18.38■□□□□ 0.53
HACD3-208ENST00000566239 CHD4Q14839 1912 aa18.38■□□□□ 0.53
HACD3-208ENST00000566239 FHDC1Q9C0D6 1143 aaPredicted RBP18.37■□□□□ 0.53
HACD3-208ENST00000566239 YY1P25490 414 aa18.36■□□□□ 0.53
HACD3-208ENST00000566239 KCNQ4P56696 695 aa18.36■□□□□ 0.53
HACD3-208ENST00000566239 ARXQ96QS3 562 aa18.36■□□□□ 0.53
HACD3-208ENST00000566239 POLKQ9UBT6 870 aa18.36■□□□□ 0.53
HACD3-208ENST00000566239 SPG7Q9UQ90 795 aa18.36■□□□□ 0.53
HACD3-208ENST00000566239 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
HACD3-208ENST00000566239 CYP27B1O15528 508 aa18.35■□□□□ 0.53
HACD3-208ENST00000566239 SYT17Q9BSW7 474 aa18.35■□□□□ 0.53
HACD3-208ENST00000566239 POLD1P28340 1107 aa18.34■□□□□ 0.53
HACD3-208ENST00000566239 TNNT2P45379 298 aaPredicted RBP18.34■□□□□ 0.53
HACD3-208ENST00000566239 MPRIPQ6WCQ1 1025 aa18.34■□□□□ 0.53
HACD3-208ENST00000566239 EYA1Q99502 592 aa18.33■□□□□ 0.52
HACD3-208ENST00000566239 PANK3Q9H999 370 aa18.33■□□□□ 0.52
HACD3-208ENST00000566239 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
HACD3-208ENST00000566239 MAP3K5Q99683 1374 aa18.32■□□□□ 0.52
HACD3-208ENST00000566239 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.32■□□□□ 0.52
HACD3-208ENST00000566239 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
HACD3-208ENST00000566239 SMARCC1Q92922 1105 aaPredicted RBP18.31■□□□□ 0.52
HACD3-208ENST00000566239 NKX1-1Q15270 411 aaPredicted RBP18.3■□□□□ 0.52
HACD3-208ENST00000566239 UBR3Q6ZT12 1888 aa18.3■□□□□ 0.52
HACD3-208ENST00000566239 PLEKHG2Q9H7P9 1386 aa18.3■□□□□ 0.52
HACD3-208ENST00000566239 MSH5O43196 834 aa18.29■□□□□ 0.52
HACD3-208ENST00000566239 EIF4A2Q14240 407 aaKnown RBP18.29■□□□□ 0.52
HACD3-208ENST00000566239 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
HACD3-208ENST00000566239 MORC1Q86VD1 984 aa18.27■□□□□ 0.52
HACD3-208ENST00000566239 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
HACD3-208ENST00000566239 FLAD1Q8NFF5 587 aa18.27■□□□□ 0.52
HACD3-208ENST00000566239 PIGBQ92521 554 aa18.26■□□□□ 0.51
HACD3-208ENST00000566239 TMOD3Q9NYL9 352 aa18.26■□□□□ 0.51
HACD3-208ENST00000566239 KNSTRNQ9Y448 316 aa18.26■□□□□ 0.51
HACD3-208ENST00000566239 IGSF1Q8N6C5 1336 aa18.25■□□□□ 0.51
HACD3-208ENST00000566239 PHKG2P15735 406 aa18.25■□□□□ 0.51
HACD3-208ENST00000566239 COL23A1Q86Y22 540 aaPredicted RBP18.25■□□□□ 0.51
HACD3-208ENST00000566239 VIRMAQ69YN4 1812 aaKnown RBP18.23■□□□□ 0.51
HACD3-208ENST00000566239 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
HACD3-208ENST00000566239 AK7Q96M32 723 aa18.23■□□□□ 0.51
HACD3-208ENST00000566239 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
HACD3-208ENST00000566239 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
HACD3-208ENST00000566239 SIK1P57059 783 aa18.21■□□□□ 0.51
HACD3-208ENST00000566239 GPR162Q16538 588 aa18.21■□□□□ 0.51
HACD3-208ENST00000566239 PLEKHO1Q53GL0 409 aaPredicted RBP18.21■□□□□ 0.51
HACD3-208ENST00000566239 SCN11AQ9UI33 1791 aa18.19■□□□□ 0.5
HACD3-208ENST00000566239 COL5A3P25940 1745 aaPredicted RBP18.19■□□□□ 0.5
HACD3-208ENST00000566239 AMOTQ4VCS5 1084 aa18.19■□□□□ 0.5
HACD3-208ENST00000566239 MSL1Q68DK7 614 aa18.19■□□□□ 0.5
HACD3-208ENST00000566239 KIF7Q2M1P5 1343 aa18.19■□□□□ 0.5
HACD3-208ENST00000566239 ERVV-2B6SEH9 535 aa18.18■□□□□ 0.5
HACD3-208ENST00000566239 DCAF5Q96JK2 942 aa18.18■□□□□ 0.5
HACD3-208ENST00000566239 ASAP1Q9ULH1 1129 aa18.18■□□□□ 0.5
HACD3-208ENST00000566239 PHF14O94880 888 aa18.17■□□□□ 0.5
HACD3-208ENST00000566239 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
HACD3-208ENST00000566239 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
HACD3-208ENST00000566239 PELP1Q8IZL8 1130 aaKnown RBP18.17■□□□□ 0.5
HACD3-208ENST00000566239 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms