RNA–Protein interactions for RNA: ENST00000566119.5

EDC3-209, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-209ENST00000566119 NUP188Q5SRE5 1749 aa28.25■■■□□ 2.11
EDC3-209ENST00000566119 KNSTRNQ9Y448 316 aa28.23■■■□□ 2.11
EDC3-209ENST00000566119 ANO8Q9HCE9 1232 aaPredicted RBP28.22■■■□□ 2.11
EDC3-209ENST00000566119 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
EDC3-209ENST00000566119 NSD2O96028 1365 aa28.21■■■□□ 2.11
EDC3-209ENST00000566119 NHSQ6T4R5 1651 aa28.2■■■□□ 2.11
EDC3-209ENST00000566119 RGPD3A6NKT7 1758 aaPredicted RBP28.2■■■□□ 2.11
EDC3-209ENST00000566119 RGPD4Q7Z3J3 1758 aa28.2■■■□□ 2.11
EDC3-209ENST00000566119 MORC1Q86VD1 984 aa28.2■■■□□ 2.1
EDC3-209ENST00000566119 EYA1Q99502 592 aa28.2■■■□□ 2.1
EDC3-209ENST00000566119 SYTL4Q96C24 671 aaPredicted RBP28.19■■■□□ 2.1
EDC3-209ENST00000566119 EIF4A2Q14240 407 aaKnown RBP28.17■■■□□ 2.1
EDC3-209ENST00000566119 LRP5O75197 1615 aa28.16■■■□□ 2.1
EDC3-209ENST00000566119 AMER1Q5JTC6 1135 aaPredicted RBP28.15■■■□□ 2.1
EDC3-209ENST00000566119 STK32BQ9NY57 414 aa28.14■■■□□ 2.1
EDC3-209ENST00000566119 NCAPD2Q15021 1401 aa28.14■■■□□ 2.1
EDC3-209ENST00000566119 ANKRD26Q9UPS8 1709 aa28.14■■■□□ 2.1
EDC3-209ENST00000566119 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
EDC3-209ENST00000566119 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
EDC3-209ENST00000566119 MAP2P11137 1827 aaKnown RBP28.13■■■□□ 2.09
EDC3-209ENST00000566119 SLC15A2Q16348 729 aa28.13■■■□□ 2.09
EDC3-209ENST00000566119 CYP27B1O15528 508 aa28.12■■■□□ 2.09
EDC3-209ENST00000566119 PER1O15534 1290 aaPredicted RBP28.12■■■□□ 2.09
EDC3-209ENST00000566119 LRRC4BQ9NT99 713 aa28.12■■■□□ 2.09
EDC3-209ENST00000566119 PDGFDQ9GZP0 370 aaPredicted RBP28.11■■■□□ 2.09
EDC3-209ENST00000566119 SHANK3Q9BYB0 1731 aa28.1■■■□□ 2.09
EDC3-209ENST00000566119 SPG7Q9UQ90 795 aa28.1■■■□□ 2.09
EDC3-209ENST00000566119 BTAF1O14981 1849 aa28.08■■■□□ 2.09
EDC3-209ENST00000566119 SPON1Q9HCB6 807 aa28.08■■■□□ 2.09
EDC3-209ENST00000566119 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.07■■■□□ 2.08
EDC3-209ENST00000566119 SLC27A3Q5K4L6 730 aa28.06■■■□□ 2.08
EDC3-209ENST00000566119 KCNQ4P56696 695 aa28.05■■■□□ 2.08
EDC3-209ENST00000566119 IGSF1Q8N6C5 1336 aa28.05■■■□□ 2.08
EDC3-209ENST00000566119 NKX1-1Q15270 411 aaPredicted RBP28.04■■■□□ 2.08
EDC3-209ENST00000566119 CC2D1BQ5T0F9 858 aaKnown RBP28.03■■■□□ 2.08
EDC3-209ENST00000566119 DOT1LQ8TEK3 1739 aa28.03■■■□□ 2.08
EDC3-209ENST00000566119 ZNF827Q17R98 1081 aa28.02■■■□□ 2.08
EDC3-209ENST00000566119 MPRIPQ6WCQ1 1025 aa28.02■■■□□ 2.08
EDC3-209ENST00000566119 KAT6BQ8WYB5 2073 aa28.02■■■□□ 2.08
EDC3-209ENST00000566119 ZBTB7AO95365 584 aa28.01■■■□□ 2.07
EDC3-209ENST00000566119 PHKG2P15735 406 aa27.99■■■□□ 2.07
EDC3-209ENST00000566119 MTHFSP49914 203 aa27.99■■■□□ 2.07
EDC3-209ENST00000566119 IFNL2Q8IZJ0 200 aa27.99■■■□□ 2.07
EDC3-209ENST00000566119 AKT1S1Q96B36 256 aa27.99■■■□□ 2.07
EDC3-209ENST00000566119 IL13P35225 146 aa27.98■■■□□ 2.07
EDC3-209ENST00000566119 CCNL1Q9UK58 526 aaPredicted RBP27.98■■■□□ 2.07
EDC3-209ENST00000566119 ATF5Q9Y2D1 282 aaPredicted RBP27.98■■■□□ 2.07
EDC3-209ENST00000566119 PPP1R1BQ9UD71 204 aaPredicted RBP27.97■■■□□ 2.07
EDC3-209ENST00000566119 PKD1L3Q7Z443 1732 aa27.97■■■□□ 2.07
EDC3-209ENST00000566119 PAPPAQ13219 1627 aa27.96■■■□□ 2.07
EDC3-209ENST00000566119 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
EDC3-209ENST00000566119 AEBP1Q8IUX7 1158 aa27.96■■■□□ 2.07
EDC3-209ENST00000566119 PIGBQ92521 554 aa27.96■■■□□ 2.07
EDC3-209ENST00000566119 CASZ1Q86V15 1759 aa27.94■■■□□ 2.06
EDC3-209ENST00000566119 PLEKHO1Q53GL0 409 aaPredicted RBP27.94■■■□□ 2.06
EDC3-209ENST00000566119 SULT6B1Q6IMI4 303 aa27.94■■■□□ 2.06
EDC3-209ENST00000566119 PLEKHG2Q9H7P9 1386 aa27.94■■■□□ 2.06
EDC3-209ENST00000566119 MTFR1LQ9H019 292 aa27.93■■■□□ 2.06
EDC3-209ENST00000566119 NPC1L1Q9UHC9 1359 aa27.92■■■□□ 2.06
EDC3-209ENST00000566119 PTGER2P43116 358 aa27.92■■■□□ 2.06
EDC3-209ENST00000566119 TFCP2L1Q9NZI6 479 aa27.92■■■□□ 2.06
EDC3-209ENST00000566119 PALLDQ8WX93 1383 aa27.91■■■□□ 2.06
EDC3-209ENST00000566119 AMOTQ4VCS5 1084 aa27.91■■■□□ 2.06
EDC3-209ENST00000566119 SMARCC1Q92922 1105 aaPredicted RBP27.91■■■□□ 2.06
EDC3-209ENST00000566119 TMOD3Q9NYL9 352 aa27.9■■■□□ 2.06
EDC3-209ENST00000566119 LY75O60449 1722 aa27.88■■■□□ 2.05
EDC3-209ENST00000566119 ZNF530Q6P9A1 599 aaPredicted RBP27.88■■■□□ 2.05
EDC3-209ENST00000566119 PNPLA7Q6ZV29 1317 aa27.88■■■□□ 2.05
EDC3-209ENST00000566119 TOGARAM1Q9Y4F4 1720 aa27.87■■■□□ 2.05
EDC3-209ENST00000566119 KDRP35968 1356 aa27.86■■■□□ 2.05
EDC3-209ENST00000566119 HSP90AB1P08238 724 aaKnown RBP27.86■■■□□ 2.05
EDC3-209ENST00000566119 DCAF5Q96JK2 942 aa27.86■■■□□ 2.05
EDC3-209ENST00000566119 SGIP1Q9BQI5 828 aa27.86■■■□□ 2.05
EDC3-209ENST00000566119 DIAPH1O60610 1272 aaKnown RBP27.85■■■□□ 2.05
EDC3-209ENST00000566119 ASAP1Q9ULH1 1129 aa27.85■■■□□ 2.05
EDC3-209ENST00000566119 ERVV-2B6SEH9 535 aa27.84■■■□□ 2.05
EDC3-209ENST00000566119 SLC16A10Q8TF71 515 aa27.84■■■□□ 2.05
EDC3-209ENST00000566119 HMGB2P26583 209 aaKnown RBP27.83■■■□□ 2.05
EDC3-209ENST00000566119 HMOX1P09601 288 aa27.82■■■□□ 2.04
EDC3-209ENST00000566119 ATG3Q9NT62 314 aa27.82■■■□□ 2.04
EDC3-209ENST00000566119 LOC102724428A0A0B4J2F2 783 aa27.81■■■□□ 2.04
EDC3-209ENST00000566119 SIK1P57059 783 aa27.81■■■□□ 2.04
EDC3-209ENST00000566119 C1orf141Q5JVX7 400 aa27.81■■■□□ 2.04
EDC3-209ENST00000566119 COL23A1Q86Y22 540 aaPredicted RBP27.8■■■□□ 2.04
EDC3-209ENST00000566119 ITGB4P16144 1822 aa27.8■■■□□ 2.04
EDC3-209ENST00000566119 MSH5O43196 834 aa27.78■■■□□ 2.04
EDC3-209ENST00000566119 CABP4P57796 275 aa27.78■■■□□ 2.04
EDC3-209ENST00000566119 ARXQ96QS3 562 aa27.78■■■□□ 2.04
EDC3-209ENST00000566119 KDM6AO15550 1401 aaPredicted RBP27.77■■■□□ 2.04
EDC3-209ENST00000566119 FHDC1Q9C0D6 1143 aaPredicted RBP27.76■■■□□ 2.03
EDC3-209ENST00000566119 ATP6V1AP38606 617 aa27.75■■■□□ 2.03
EDC3-209ENST00000566119 ITPK1Q13572 414 aa27.74■■■□□ 2.03
EDC3-209ENST00000566119 AKAP4Q5JQC9 854 aa27.74■■■□□ 2.03
EDC3-209ENST00000566119 LINC00116Q8NCU8 138 aa27.74■■■□□ 2.03
EDC3-209ENST00000566119 AK7Q96M32 723 aa27.74■■■□□ 2.03
EDC3-209ENST00000566119 SYT17Q9BSW7 474 aa27.74■■■□□ 2.03
EDC3-209ENST00000566119 U2SURPO15042 1029 aaKnown RBP27.73■■■□□ 2.03
EDC3-209ENST00000566119 NFATC2IPQ8NCF5 419 aa27.73■■■□□ 2.03
EDC3-209ENST00000566119 FLAD1Q8NFF5 587 aa27.73■■■□□ 2.03
EDC3-209ENST00000566119 POLD1P28340 1107 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms