RNA–Protein interactions for RNA: ENST00000566052.1

IFT140-207, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 544 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-207ENST00000566052 COL24A1Q17RW2 1714 aa20.75■□□□□ 0.91
IFT140-207ENST00000566052 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
IFT140-207ENST00000566052 RRS1Q15050 365 aaKnown RBP20.74■□□□□ 0.91
IFT140-207ENST00000566052 ZNF827Q17R98 1081 aa20.74■□□□□ 0.91
IFT140-207ENST00000566052 NBPF6Q5VWK0 638 aa20.74■□□□□ 0.91
IFT140-207ENST00000566052 AKT1S1Q96B36 256 aa20.74■□□□□ 0.91
IFT140-207ENST00000566052 NBPF4Q96M43 638 aa20.74■□□□□ 0.91
IFT140-207ENST00000566052 UTRNP46939 3433 aa20.74■□□□□ 0.91
IFT140-207ENST00000566052 NSD2O96028 1365 aa20.73■□□□□ 0.91
IFT140-207ENST00000566052 KIF24Q5T7B8 1368 aa20.73■□□□□ 0.91
IFT140-207ENST00000566052 SYT17Q9BSW7 474 aa20.73■□□□□ 0.91
IFT140-207ENST00000566052 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
IFT140-207ENST00000566052 PRIM1P49642 420 aaKnown RBP20.72■□□□□ 0.91
IFT140-207ENST00000566052 FHDC1Q9C0D6 1143 aaPredicted RBP20.72■□□□□ 0.91
IFT140-207ENST00000566052 INSRP06213 1382 aa20.72■□□□□ 0.91
IFT140-207ENST00000566052 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
IFT140-207ENST00000566052 SMG6Q86US8 1419 aaKnown RBP20.71■□□□□ 0.91
IFT140-207ENST00000566052 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
IFT140-207ENST00000566052 MAP3K5Q99683 1374 aa20.71■□□□□ 0.91
IFT140-207ENST00000566052 SYTL4Q96C24 671 aaPredicted RBP20.69■□□□□ 0.9
IFT140-207ENST00000566052 ARXQ96QS3 562 aa20.69■□□□□ 0.9
IFT140-207ENST00000566052 FLT4P35916 1363 aa20.69■□□□□ 0.9
IFT140-207ENST00000566052 HSP90AB2PQ58FF8 381 aa20.68■□□□□ 0.9
IFT140-207ENST00000566052 CARD14Q9BXL6 1004 aa20.68■□□□□ 0.9
IFT140-207ENST00000566052 ANKRD26Q9UPS8 1709 aa20.67■□□□□ 0.9
IFT140-207ENST00000566052 RAPGEF4Q8WZA2 1011 aa20.67■□□□□ 0.9
IFT140-207ENST00000566052 CHD4Q14839 1912 aa20.66■□□□□ 0.9
IFT140-207ENST00000566052 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
IFT140-207ENST00000566052 PNPLA7Q6ZV29 1317 aa20.66■□□□□ 0.9
IFT140-207ENST00000566052 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
IFT140-207ENST00000566052 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
IFT140-207ENST00000566052 NCAPD2Q15021 1401 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 NSD3Q9BZ95 1437 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 PCDH11XQ9BZA7 1347 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 PCDH11YQ9BZA8 1340 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 MAP2P11137 1827 aaKnown RBP20.63■□□□□ 0.89
IFT140-207ENST00000566052 KCNQ4P56696 695 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 TFCP2L1Q9NZI6 479 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 PKD1L3Q7Z443 1732 aa20.63■□□□□ 0.89
IFT140-207ENST00000566052 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
IFT140-207ENST00000566052 ITGB4P16144 1822 aa20.62■□□□□ 0.89
IFT140-207ENST00000566052 TAF1LQ8IZX4 1826 aa20.61■□□□□ 0.89
IFT140-207ENST00000566052 C5P01031 1676 aa20.61■□□□□ 0.89
IFT140-207ENST00000566052 EMILIN1Q9Y6C2 1016 aa20.6■□□□□ 0.89
IFT140-207ENST00000566052 TOGARAM1Q9Y4F4 1720 aa20.59■□□□□ 0.89
IFT140-207ENST00000566052 CYP27B1O15528 508 aa20.59■□□□□ 0.89
IFT140-207ENST00000566052 POLD1P28340 1107 aa20.59■□□□□ 0.89
IFT140-207ENST00000566052 GOLGB1Q14789 3259 aaKnown RBP20.59■□□□□ 0.89
IFT140-207ENST00000566052 WASHC2AQ641Q2 1341 aa20.58■□□□□ 0.89
IFT140-207ENST00000566052 HMGB2P26583 209 aaKnown RBP20.58■□□□□ 0.89
IFT140-207ENST00000566052 NKX1-1Q15270 411 aaPredicted RBP20.55■□□□□ 0.88
IFT140-207ENST00000566052 COL23A1Q86Y22 540 aaPredicted RBP20.55■□□□□ 0.88
IFT140-207ENST00000566052 ZNF784Q8NCA9 323 aaPredicted RBP20.54■□□□□ 0.88
IFT140-207ENST00000566052 PALLDQ8WX93 1383 aa20.54■□□□□ 0.88
IFT140-207ENST00000566052 MPRIPQ6WCQ1 1025 aa20.53■□□□□ 0.88
IFT140-207ENST00000566052 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.53■□□□□ 0.88
IFT140-207ENST00000566052 PPM1GO15355 546 aaPredicted RBP20.52■□□□□ 0.88
IFT140-207ENST00000566052 SMARCC1Q92922 1105 aaPredicted RBP20.52■□□□□ 0.88
IFT140-207ENST00000566052 POLKQ9UBT6 870 aa20.52■□□□□ 0.88
IFT140-207ENST00000566052 SPG7Q9UQ90 795 aa20.52■□□□□ 0.88
IFT140-207ENST00000566052 C4BP0C0L5 1744 aa20.51■□□□□ 0.87
IFT140-207ENST00000566052 FLAD1Q8NFF5 587 aa20.51■□□□□ 0.87
IFT140-207ENST00000566052 EYA1Q99502 592 aa20.51■□□□□ 0.87
IFT140-207ENST00000566052 PLEKHG2Q9H7P9 1386 aa20.5■□□□□ 0.87
IFT140-207ENST00000566052 GPR162Q16538 588 aa20.5■□□□□ 0.87
IFT140-207ENST00000566052 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
IFT140-207ENST00000566052 PIGBQ92521 554 aa20.49■□□□□ 0.87
IFT140-207ENST00000566052 PCGF6Q9BYE7 350 aa20.49■□□□□ 0.87
IFT140-207ENST00000566052 MSH5O43196 834 aa20.48■□□□□ 0.87
IFT140-207ENST00000566052 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
IFT140-207ENST00000566052 NLGN2Q8NFZ4 835 aa20.48■□□□□ 0.87
IFT140-207ENST00000566052 EIF4G2P78344 907 aaKnown RBP eCLIP20.46■□□□□ 0.874e-7■■■□□ 18.2
IFT140-207ENST00000566052 EIF4A2Q14240 407 aaKnown RBP20.45■□□□□ 0.86
IFT140-207ENST00000566052 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
IFT140-207ENST00000566052 PHKG2P15735 406 aa20.44■□□□□ 0.86
IFT140-207ENST00000566052 HSPA5P11021 654 aaKnown RBP20.43■□□□□ 0.86
IFT140-207ENST00000566052 MSL1Q68DK7 614 aa20.43■□□□□ 0.86
IFT140-207ENST00000566052 POLR3GLQ9BT43 218 aa20.43■□□□□ 0.86
IFT140-207ENST00000566052 TMOD3Q9NYL9 352 aa20.43■□□□□ 0.86
IFT140-207ENST00000566052 LOC102724428A0A0B4J2F2 783 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 SIK1P57059 783 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 AMIGO3Q86WK7 504 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 AK7Q96M32 723 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 PANK3Q9H999 370 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 CD2APQ9Y5K6 639 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
IFT140-207ENST00000566052 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
IFT140-207ENST00000566052 ZNF831Q5JPB2 1677 aa20.41■□□□□ 0.86
IFT140-207ENST00000566052 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
IFT140-207ENST00000566052 YBX3P16989 372 aaKnown RBP eCLIP20.4■□□□□ 0.86
IFT140-207ENST00000566052 SSFA2P28290 1259 aa20.4■□□□□ 0.86
IFT140-207ENST00000566052 PELP1Q8IZL8 1130 aaKnown RBP20.4■□□□□ 0.86
IFT140-207ENST00000566052 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
IFT140-207ENST00000566052 LINC00116Q8NCU8 138 aa20.39■□□□□ 0.85
IFT140-207ENST00000566052 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.38■□□□□ 0.85
IFT140-207ENST00000566052 ERVV-2B6SEH9 535 aa20.37■□□□□ 0.85
IFT140-207ENST00000566052 ITPK1Q13572 414 aa20.37■□□□□ 0.85
IFT140-207ENST00000566052 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
IFT140-207ENST00000566052 ATP6V1AP38606 617 aa20.36■□□□□ 0.85
IFT140-207ENST00000566052 KDRP35968 1356 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms