RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 FCHSD2O94868 740 aa22.22■■□□□ 1.15
RNF40-207ENST00000565931 ZCRB1Q8TBF4 217 aaKnown RBP22.22■■□□□ 1.15
RNF40-207ENST00000565931 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.21■■□□□ 1.153e-14■□□□□ 9.3
RNF40-207ENST00000565931 PDE3BQ13370 1112 aa22.2■■□□□ 1.14
RNF40-207ENST00000565931 WDR43Q15061 677 aaKnown RBP eCLIP22.2■■□□□ 1.14
RNF40-207ENST00000565931 KRT27Q7Z3Y8 459 aa22.2■■□□□ 1.14
RNF40-207ENST00000565931 PNISRQ8TF01 805 aaKnown RBP22.2■■□□□ 1.14
RNF40-207ENST00000565931 PLEKHG2Q9H7P9 1386 aa22.2■■□□□ 1.14
RNF40-207ENST00000565931 CCER2I3L3R5 266 aa22.19■■□□□ 1.14
RNF40-207ENST00000565931 PRKAR2BP31323 418 aa22.19■■□□□ 1.14
RNF40-207ENST00000565931 PLEKHO1Q53GL0 409 aaPredicted RBP22.19■■□□□ 1.14
RNF40-207ENST00000565931 ILDR2Q71H61 639 aa22.19■■□□□ 1.14
RNF40-207ENST00000565931 ADAMTS8Q9UP79 889 aa22.19■■□□□ 1.14
RNF40-207ENST00000565931 TNS2Q63HR2 1409 aa22.19■■□□□ 1.14
RNF40-207ENST00000565931 MARCH10Q8NA82 808 aaPredicted RBP22.18■■□□□ 1.14
RNF40-207ENST00000565931 SPG7Q9UQ90 795 aa22.18■■□□□ 1.14
RNF40-207ENST00000565931 AMOTQ4VCS5 1084 aa22.17■■□□□ 1.14
RNF40-207ENST00000565931 DDX54Q8TDD1 881 aaKnown RBP22.16■■□□□ 1.14
RNF40-207ENST00000565931 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
RNF40-207ENST00000565931 PHACTR3Q96KR7 559 aa22.15■■□□□ 1.14
RNF40-207ENST00000565931 PLEKHF1Q96S99 279 aa22.15■■□□□ 1.14
RNF40-207ENST00000565931 LRRC37A3O60309 1634 aa22.15■■□□□ 1.14
RNF40-207ENST00000565931 WNK3Q9BYP7 1800 aa22.15■■□□□ 1.14
RNF40-207ENST00000565931 CYP27B1O15528 508 aa22.14■■□□□ 1.13
RNF40-207ENST00000565931 FAM182BQ5T319 152 aa22.14■■□□□ 1.13
RNF40-207ENST00000565931 PNNQ9H307 717 aaKnown RBP22.14■■□□□ 1.13
RNF40-207ENST00000565931 PCDH11XQ9BZA7 1347 aa22.13■■□□□ 1.13
RNF40-207ENST00000565931 PCDH11YQ9BZA8 1340 aa22.13■■□□□ 1.13
RNF40-207ENST00000565931 MTHFSDQ2M296 383 aaKnown RBP22.13■■□□□ 1.13
RNF40-207ENST00000565931 ZNF530Q6P9A1 599 aaPredicted RBP22.12■■□□□ 1.13
RNF40-207ENST00000565931 PHKG2P15735 406 aa22.11■■□□□ 1.13
RNF40-207ENST00000565931 IFNL2Q8IZJ0 200 aa22.11■■□□□ 1.13
RNF40-207ENST00000565931 GAS2L2Q8NHY3 880 aa22.1■■□□□ 1.13
RNF40-207ENST00000565931 NEFMP07197 916 aa22.09■■□□□ 1.13
RNF40-207ENST00000565931 NKX1-1Q15270 411 aaPredicted RBP22.09■■□□□ 1.13
RNF40-207ENST00000565931 FAM196AQ6ZSG2 479 aa22.09■■□□□ 1.13
RNF40-207ENST00000565931 CCDC146Q8IYE0 955 aa22.09■■□□□ 1.13
RNF40-207ENST00000565931 RUNDC1Q96C34 613 aa22.08■■□□□ 1.13
RNF40-207ENST00000565931 BCL9O00512 1426 aa22.07■■□□□ 1.12
RNF40-207ENST00000565931 PKD1L3Q7Z443 1732 aa22.07■■□□□ 1.12
RNF40-207ENST00000565931 AKAP4Q5JQC9 854 aa22.07■■□□□ 1.12
RNF40-207ENST00000565931 C1orf141Q5JVX7 400 aa22.07■■□□□ 1.12
RNF40-207ENST00000565931 FAM9BQ8IZU0 186 aa22.07■■□□□ 1.12
RNF40-207ENST00000565931 MAPK8IP3Q9UPT6 1336 aa22.06■■□□□ 1.12
RNF40-207ENST00000565931 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
RNF40-207ENST00000565931 HSP90AB1P08238 724 aaKnown RBP22.05■■□□□ 1.12
RNF40-207ENST00000565931 NFE2L2Q16236 605 aa22.04■■□□□ 1.12
RNF40-207ENST00000565931 SHANK3Q9BYB0 1731 aa22.03■■□□□ 1.12
RNF40-207ENST00000565931 MPRIPQ6WCQ1 1025 aa22.02■■□□□ 1.12
RNF40-207ENST00000565931 DCAF5Q96JK2 942 aa22.02■■□□□ 1.12
RNF40-207ENST00000565931 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
RNF40-207ENST00000565931 TMPOP42166 694 aaKnown RBP22.01■■□□□ 1.11
RNF40-207ENST00000565931 ACSBG1Q96GR2 724 aa22.01■■□□□ 1.11
RNF40-207ENST00000565931 MAP3K5Q99683 1374 aa22■■□□□ 1.11
RNF40-207ENST00000565931 APAF1O14727 1248 aa22■■□□□ 1.11
RNF40-207ENST00000565931 LGR6Q9HBX8 967 aa22■■□□□ 1.11
RNF40-207ENST00000565931 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
RNF40-207ENST00000565931 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
RNF40-207ENST00000565931 KCNQ2O43526 872 aa21.99■■□□□ 1.11
RNF40-207ENST00000565931 TRIM37O94972 964 aa21.99■■□□□ 1.11
RNF40-207ENST00000565931 PRIM1P49642 420 aaKnown RBP21.99■■□□□ 1.11
RNF40-207ENST00000565931 IL17REQ8NFR9 667 aa21.99■■□□□ 1.11
RNF40-207ENST00000565931 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
RNF40-207ENST00000565931 RIPK4P57078 832 aa21.98■■□□□ 1.11
RNF40-207ENST00000565931 PTF1AQ7RTS3 328 aa21.98■■□□□ 1.11
RNF40-207ENST00000565931 RRP7AQ9Y3A4 280 aaKnown RBP21.98■■□□□ 1.11
RNF40-207ENST00000565931 ERVV-2B6SEH9 535 aa21.97■■□□□ 1.11
RNF40-207ENST00000565931 BCL11BQ9C0K0 894 aaPredicted RBP21.97■■□□□ 1.11
RNF40-207ENST00000565931 NEUROD2Q15784 382 aa21.95■■□□□ 1.1
RNF40-207ENST00000565931 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
RNF40-207ENST00000565931 UPF1Q92900 1129 aaKnown RBP eCLIP21.95■■□□□ 1.1
RNF40-207ENST00000565931 SYTL4Q96C24 671 aaPredicted RBP21.95■■□□□ 1.1
RNF40-207ENST00000565931 CABP4P57796 275 aa21.94■■□□□ 1.1
RNF40-207ENST00000565931 DCTN1Q14203 1278 aa21.94■■□□□ 1.1
RNF40-207ENST00000565931 MCM10Q7L590 875 aa21.94■■□□□ 1.1
RNF40-207ENST00000565931 CCDC125Q86Z20 511 aa21.93■■□□□ 1.1
RNF40-207ENST00000565931 CEMIPQ8WUJ3 1361 aa21.93■■□□□ 1.1
RNF40-207ENST00000565931 PIGBQ92521 554 aa21.93■■□□□ 1.1
RNF40-207ENST00000565931 TRIM35Q9UPQ4 493 aa21.93■■□□□ 1.1
RNF40-207ENST00000565931 LMOD3Q0VAK6 560 aa21.92■■□□□ 1.1
RNF40-207ENST00000565931 SLC52A2Q9HAB3 445 aa21.92■■□□□ 1.1
RNF40-207ENST00000565931 TMOD3Q9NYL9 352 aa21.92■■□□□ 1.1
RNF40-207ENST00000565931 SENP3-EIF4A1A0A087X0R7 540 aa21.91■■□□□ 1.1
RNF40-207ENST00000565931 NFATC2IPQ8NCF5 419 aa21.91■■□□□ 1.1
RNF40-207ENST00000565931 NCBP3Q53F19 620 aaKnown RBP21.9■■□□□ 1.1
RNF40-207ENST00000565931 THUMPD2Q9BTF0 503 aaKnown RBP21.9■■□□□ 1.1
RNF40-207ENST00000565931 APBA3O96018 575 aa21.89■■□□□ 1.09
RNF40-207ENST00000565931 TEFQ10587 303 aa21.89■■□□□ 1.09
RNF40-207ENST00000565931 TOGARAM1Q9Y4F4 1720 aa21.89■■□□□ 1.09
RNF40-207ENST00000565931 ADAMTS7Q9UKP4 1686 aa21.88■■□□□ 1.09
RNF40-207ENST00000565931 SF3B2Q13435 895 aaKnown RBP21.88■■□□□ 1.09
RNF40-207ENST00000565931 DOT1LQ8TEK3 1739 aa21.87■■□□□ 1.09
RNF40-207ENST00000565931 CCDC27Q2M243 656 aa21.87■■□□□ 1.09
RNF40-207ENST00000565931 MRC1P22897 1456 aa21.87■■□□□ 1.09
RNF40-207ENST00000565931 NHSQ6T4R5 1651 aa21.87■■□□□ 1.09
RNF40-207ENST00000565931 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
RNF40-207ENST00000565931 PLSCR1O15162 318 aa21.85■■□□□ 1.09
RNF40-207ENST00000565931 ASAP1Q9ULH1 1129 aa21.85■■□□□ 1.09
RNF40-207ENST00000565931 BAG6P46379 1132 aa21.84■■□□□ 1.09
RNF40-207ENST00000565931 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms