RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 OSBPP22059 807 aa12.47□□□□□ -0.41
CDH13-207ENST00000565636 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
CDH13-207ENST00000565636 RBM27Q9P2N5 1060 aaKnown RBP12.47□□□□□ -0.41
CDH13-207ENST00000565636 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
CDH13-207ENST00000565636 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-207ENST00000565636 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-207ENST00000565636 PPP4CP60510 307 aa12.46□□□□□ -0.41
CDH13-207ENST00000565636 KCNC4Q03721 635 aa12.46□□□□□ -0.41
CDH13-207ENST00000565636 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-207ENST00000565636 ARHGEF1Q92888 912 aaKnown RBP12.46□□□□□ -0.41
CDH13-207ENST00000565636 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
CDH13-207ENST00000565636 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
CDH13-207ENST00000565636 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
CDH13-207ENST00000565636 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
CDH13-207ENST00000565636 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
CDH13-207ENST00000565636 TATDN2Q93075 761 aa12.44□□□□□ -0.42
CDH13-207ENST00000565636 PNMA3Q9UL41 463 aa12.44□□□□□ -0.42
CDH13-207ENST00000565636 TSHZ2Q9NRE2 1034 aa12.43□□□□□ -0.42
CDH13-207ENST00000565636 TECPR2O15040 1411 aa12.43□□□□□ -0.42
CDH13-207ENST00000565636 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
CDH13-207ENST00000565636 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
CDH13-207ENST00000565636 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
CDH13-207ENST00000565636 NECTIN2Q92692 538 aa12.42□□□□□ -0.42
CDH13-207ENST00000565636 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
CDH13-207ENST00000565636 KNDC1Q76NI1 1749 aa12.41□□□□□ -0.42
CDH13-207ENST00000565636 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
CDH13-207ENST00000565636 USP21Q9UK80 565 aa12.41□□□□□ -0.42
CDH13-207ENST00000565636 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
CDH13-207ENST00000565636 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
CDH13-207ENST00000565636 SMAPO00193 183 aa12.4□□□□□ -0.42
CDH13-207ENST00000565636 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
CDH13-207ENST00000565636 PRIM1P49642 420 aaKnown RBP12.4□□□□□ -0.42
CDH13-207ENST00000565636 SAMD7Q7Z3H4 446 aa12.4□□□□□ -0.42
CDH13-207ENST00000565636 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
CDH13-207ENST00000565636 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
CDH13-207ENST00000565636 CCDC144AA2RUR9 1427 aa12.38□□□□□ -0.43
CDH13-207ENST00000565636 RGS12O14924 1447 aa12.38□□□□□ -0.43
CDH13-207ENST00000565636 ATRNO75882 1429 aa12.38□□□□□ -0.43
CDH13-207ENST00000565636 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
CDH13-207ENST00000565636 ESCO1Q5FWF5 840 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 FAM198AQ9UFP1 575 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 MYOM2P54296 1465 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 PXDNQ92626 1479 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
CDH13-207ENST00000565636 ADAMTS2O95450 1211 aa12.36□□□□□ -0.43
CDH13-207ENST00000565636 DDX17Q92841 729 aaKnown RBP12.36□□□□□ -0.43
CDH13-207ENST00000565636 RNF40O75150 1001 aa12.35□□□□□ -0.43
CDH13-207ENST00000565636 PSME1Q06323 249 aa12.35□□□□□ -0.43
CDH13-207ENST00000565636 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
CDH13-207ENST00000565636 BCL9LQ86UU0 1499 aa12.34□□□□□ -0.43
CDH13-207ENST00000565636 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
CDH13-207ENST00000565636 KCNV2Q8TDN2 545 aa12.34□□□□□ -0.43
CDH13-207ENST00000565636 GJD4Q96KN9 370 aaPredicted RBP12.34□□□□□ -0.43
CDH13-207ENST00000565636 MPHOSPH9Q99550 1183 aa12.34□□□□□ -0.43
CDH13-207ENST00000565636 C14orf93Q9H972 538 aaKnown RBP12.34□□□□□ -0.43
CDH13-207ENST00000565636 FOXO3O43524 673 aa12.33□□□□□ -0.44
CDH13-207ENST00000565636 PIK3C2GO75747 1445 aa12.33□□□□□ -0.44
CDH13-207ENST00000565636 NWD2Q9ULI1 1742 aa12.33□□□□□ -0.44
CDH13-207ENST00000565636 SPATA31A3Q5VYP0 1347 aa12.33□□□□□ -0.44
CDH13-207ENST00000565636 ADGRF5Q8IZF2 1346 aa12.33□□□□□ -0.44
CDH13-207ENST00000565636 PADI6Q6TGC4 694 aa12.32□□□□□ -0.44
CDH13-207ENST00000565636 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
CDH13-207ENST00000565636 DHX57Q6P158 1386 aaKnown RBP12.31□□□□□ -0.44
CDH13-207ENST00000565636 RGPD8O14715 1765 aaPredicted RBP12.31□□□□□ -0.44
CDH13-207ENST00000565636 YTHDC2Q9H6S0 1430 aaKnown RBP12.31□□□□□ -0.44
CDH13-207ENST00000565636 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
CDH13-207ENST00000565636 SLF2Q8IX21 1173 aa12.31□□□□□ -0.44
CDH13-207ENST00000565636 NRXN1Q9ULB1 1477 aa12.31□□□□□ -0.44
CDH13-207ENST00000565636 SLIT2O94813 1529 aa12.31□□□□□ -0.44
CDH13-207ENST00000565636 SBNO1A3KN83 1393 aa12.3□□□□□ -0.44
CDH13-207ENST00000565636 EP400Q96L91 3159 aa12.3□□□□□ -0.44
CDH13-207ENST00000565636 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
CDH13-207ENST00000565636 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
CDH13-207ENST00000565636 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
CDH13-207ENST00000565636 KRT28Q7Z3Y7 464 aa12.29□□□□□ -0.44
CDH13-207ENST00000565636 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
CDH13-207ENST00000565636 ARHGEF10O15013 1369 aa12.29□□□□□ -0.44
CDH13-207ENST00000565636 DLC1Q96QB1 1528 aa12.28□□□□□ -0.44
CDH13-207ENST00000565636 MLLT3P42568 568 aaPredicted RBP12.28□□□□□ -0.44
CDH13-207ENST00000565636 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
CDH13-207ENST00000565636 HRCP23327 699 aa12.27□□□□□ -0.45
CDH13-207ENST00000565636 VPS72Q15906 364 aa12.27□□□□□ -0.45
CDH13-207ENST00000565636 STK26Q9P289 416 aa12.27□□□□□ -0.45
CDH13-207ENST00000565636 EIF3AQ14152 1382 aaKnown RBP12.27□□□□□ -0.45
CDH13-207ENST00000565636 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
CDH13-207ENST00000565636 ANKARQ7Z5J8 1434 aa12.27□□□□□ -0.45
CDH13-207ENST00000565636 USP32Q8NFA0 1604 aa12.26□□□□□ -0.45
CDH13-207ENST00000565636 BRWD3Q6RI45 1802 aa12.26□□□□□ -0.45
CDH13-207ENST00000565636 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
CDH13-207ENST00000565636 PRR14Q9BWN1 585 aa12.26□□□□□ -0.45
CDH13-207ENST00000565636 TJAP1Q5JTD0 557 aa12.25□□□□□ -0.45
CDH13-207ENST00000565636 TMEM132EQ6IEE7 984 aa12.25□□□□□ -0.45
CDH13-207ENST00000565636 TNS3Q68CZ2 1445 aa12.25□□□□□ -0.45
CDH13-207ENST00000565636 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
CDH13-207ENST00000565636 ADGRB2O60241 1585 aa12.24□□□□□ -0.45
CDH13-207ENST00000565636 SWT1Q5T5J6 900 aaKnown RBP12.24□□□□□ -0.45
CDH13-207ENST00000565636 RALGAPBQ86X10 1494 aa12.24□□□□□ -0.45
CDH13-207ENST00000565636 MTRQ99707 1265 aa12.24□□□□□ -0.45
CDH13-207ENST00000565636 GLI3P10071 1580 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms