RNA–Protein interactions for RNA: ENST00000565626.1

NSMCE1-210, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 259 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-210ENST00000565626 RGPD3A6NKT7 1758 aaPredicted RBP15.11■□□□□ 0.01
NSMCE1-210ENST00000565626 RGPD4Q7Z3J3 1758 aa15.11■□□□□ 0.01
NSMCE1-210ENST00000565626 PRIM1P49642 420 aaKnown RBP15.1■□□□□ 0.01
NSMCE1-210ENST00000565626 KIF24Q5T7B8 1368 aa15.1■□□□□ 0.01
NSMCE1-210ENST00000565626 RAPGEF4Q8WZA2 1011 aa15.09■□□□□ 0.01
NSMCE1-210ENST00000565626 SYTL4Q96C24 671 aaPredicted RBP15.09■□□□□ 0.01
NSMCE1-210ENST00000565626 POLKQ9UBT6 870 aa15.09■□□□□ 0.01
NSMCE1-210ENST00000565626 LRRC4BQ9NT99 713 aa15.08■□□□□ 0
NSMCE1-210ENST00000565626 TATP17735 454 aaPredicted RBP15.07■□□□□ 0
NSMCE1-210ENST00000565626 SLC15A2Q16348 729 aa15.07■□□□□ 0
NSMCE1-210ENST00000565626 STK32BQ9NY57 414 aa15.07■□□□□ 0
NSMCE1-210ENST00000565626 BTAF1O14981 1849 aa15.07■□□□□ 0
NSMCE1-210ENST00000565626 WASHC2AQ641Q2 1341 aa15.07■□□□□ 0
NSMCE1-210ENST00000565626 SHANK3Q9BYB0 1731 aa15.06■□□□□ 0
NSMCE1-210ENST00000565626 KCNQ4P56696 695 aa15.06■□□□□ 0
NSMCE1-210ENST00000565626 NSD2O96028 1365 aa15.06■□□□□ 0
NSMCE1-210ENST00000565626 ZBTB7AO95365 584 aa15.05■□□□□ -0
NSMCE1-210ENST00000565626 EYA1Q99502 592 aa15.05■□□□□ -0
NSMCE1-210ENST00000565626 SPON1Q9HCB6 807 aa15.05■□□□□ -0
NSMCE1-210ENST00000565626 KIF7Q2M1P5 1343 aa15.05■□□□□ -0
NSMCE1-210ENST00000565626 CYP27B1O15528 508 aa15.04■□□□□ -0
NSMCE1-210ENST00000565626 ZNF827Q17R98 1081 aa15.04■□□□□ -0
NSMCE1-210ENST00000565626 ANKRD26Q9UPS8 1709 aa15.03■□□□□ -0
NSMCE1-210ENST00000565626 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
NSMCE1-210ENST00000565626 ATF5Q9Y2D1 282 aaPredicted RBP15.03■□□□□ -0
NSMCE1-210ENST00000565626 MAP2P11137 1827 aaKnown RBP15.03■□□□□ -0
NSMCE1-210ENST00000565626 DOT1LQ8TEK3 1739 aa15.03■□□□□ -0
NSMCE1-210ENST00000565626 NCAPD2Q15021 1401 aa15.02■□□□□ -0
NSMCE1-210ENST00000565626 PCDH11XQ9BZA7 1347 aa15.02■□□□□ -0
NSMCE1-210ENST00000565626 PCDH11YQ9BZA8 1340 aa15.02■□□□□ -0
NSMCE1-210ENST00000565626 CASZ1Q86V15 1759 aa15.02□□□□□ -0.01
NSMCE1-210ENST00000565626 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
NSMCE1-210ENST00000565626 PPP1R1BQ9UD71 204 aaPredicted RBP15.01□□□□□ -0.01
NSMCE1-210ENST00000565626 PAPPAQ13219 1627 aa15.01□□□□□ -0.01
NSMCE1-210ENST00000565626 PTGER2P43116 358 aa15□□□□□ -0.01
NSMCE1-210ENST00000565626 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
NSMCE1-210ENST00000565626 AMER1Q5JTC6 1135 aaPredicted RBP14.99□□□□□ -0.01
NSMCE1-210ENST00000565626 SLC27A3Q5K4L6 730 aa14.99□□□□□ -0.01
NSMCE1-210ENST00000565626 MPRIPQ6WCQ1 1025 aa14.99□□□□□ -0.01
NSMCE1-210ENST00000565626 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
NSMCE1-210ENST00000565626 UTRNP46939 3433 aa14.98□□□□□ -0.01
NSMCE1-210ENST00000565626 CCNL1Q9UK58 526 aaPredicted RBP14.98□□□□□ -0.01
NSMCE1-210ENST00000565626 SPG7Q9UQ90 795 aa14.97□□□□□ -0.01
NSMCE1-210ENST00000565626 IGSF1Q8N6C5 1336 aa14.96□□□□□ -0.01
NSMCE1-210ENST00000565626 AEBP1Q8IUX7 1158 aa14.96□□□□□ -0.01
NSMCE1-210ENST00000565626 MTFR1LQ9H019 292 aa14.96□□□□□ -0.01
NSMCE1-210ENST00000565626 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 PKD1L3Q7Z443 1732 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 NKX1-1Q15270 411 aaPredicted RBP14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 PIGBQ92521 554 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 SGIP1Q9BQI5 828 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 TFCP2L1Q9NZI6 479 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 TOGARAM1Q9Y4F4 1720 aa14.95□□□□□ -0.02
NSMCE1-210ENST00000565626 PHKG2P15735 406 aa14.94□□□□□ -0.02
NSMCE1-210ENST00000565626 CNGB1Q14028 1251 aaPredicted RBP14.94□□□□□ -0.02
NSMCE1-210ENST00000565626 CC2D1BQ5T0F9 858 aaKnown RBP14.94□□□□□ -0.02
NSMCE1-210ENST00000565626 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
NSMCE1-210ENST00000565626 PALLDQ8WX93 1383 aa14.94□□□□□ -0.02
NSMCE1-210ENST00000565626 LY75O60449 1722 aa14.93□□□□□ -0.02
NSMCE1-210ENST00000565626 IFNL2Q8IZJ0 200 aa14.93□□□□□ -0.02
NSMCE1-210ENST00000565626 IL13P35225 146 aa14.92□□□□□ -0.02
NSMCE1-210ENST00000565626 MTHFSP49914 203 aa14.91□□□□□ -0.02
NSMCE1-210ENST00000565626 SULT6B1Q6IMI4 303 aa14.91□□□□□ -0.02
NSMCE1-210ENST00000565626 FHDC1Q9C0D6 1143 aaPredicted RBP14.91□□□□□ -0.02
NSMCE1-210ENST00000565626 GOLGB1Q14789 3259 aaKnown RBP14.91□□□□□ -0.02
NSMCE1-210ENST00000565626 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
NSMCE1-210ENST00000565626 ASAP1Q9ULH1 1129 aa14.9□□□□□ -0.02
NSMCE1-210ENST00000565626 ZNF530Q6P9A1 599 aaPredicted RBP14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 SMIM5Q71RC9 77 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 AMIGO3Q86WK7 504 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 COL23A1Q86Y22 540 aaPredicted RBP14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 ARXQ96QS3 562 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 SYT17Q9BSW7 474 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 ITGB4P16144 1822 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 TUBGCP6Q96RT7 1819 aa14.89□□□□□ -0.03
NSMCE1-210ENST00000565626 MSH5O43196 834 aa14.88□□□□□ -0.03
NSMCE1-210ENST00000565626 PLEKHO1Q53GL0 409 aaPredicted RBP14.88□□□□□ -0.03
NSMCE1-210ENST00000565626 LOC102724428A0A0B4J2F2 783 aa14.87□□□□□ -0.03
NSMCE1-210ENST00000565626 SIK1P57059 783 aa14.87□□□□□ -0.03
NSMCE1-210ENST00000565626 SLC16A10Q8TF71 515 aa14.87□□□□□ -0.03
NSMCE1-210ENST00000565626 ATG3Q9NT62 314 aa14.87□□□□□ -0.03
NSMCE1-210ENST00000565626 KDM6AO15550 1401 aaPredicted RBP14.86□□□□□ -0.03
NSMCE1-210ENST00000565626 HMOX1P09601 288 aa14.86□□□□□ -0.03
NSMCE1-210ENST00000565626 ITPK1Q13572 414 aa14.86□□□□□ -0.03
NSMCE1-210ENST00000565626 MSL1Q68DK7 614 aa14.86□□□□□ -0.03
NSMCE1-210ENST00000565626 LINC00116Q8NCU8 138 aa14.86□□□□□ -0.03
NSMCE1-210ENST00000565626 KDRP35968 1356 aa14.85□□□□□ -0.03
NSMCE1-210ENST00000565626 AMOTQ4VCS5 1084 aa14.85□□□□□ -0.03
NSMCE1-210ENST00000565626 DCAF5Q96JK2 942 aa14.85□□□□□ -0.03
NSMCE1-210ENST00000565626 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
NSMCE1-210ENST00000565626 C5P01031 1676 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 QSER1Q2KHR3 1735 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 ERVV-2B6SEH9 535 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 KLHL34Q8N239 644 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 AK7Q96M32 723 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 SLC4A9Q96Q91 983 aa14.84□□□□□ -0.03
NSMCE1-210ENST00000565626 PHF14O94880 888 aa14.83□□□□□ -0.04
NSMCE1-210ENST00000565626 HSP90AB1P08238 724 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms