RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 CSB-PGBD3P0DP91 1061 aa12.18□□□□□ -0.46
CNEP1R1-206ENST00000565556 DUSP27Q5VZP5 1158 aa12.18□□□□□ -0.46
CNEP1R1-206ENST00000565556 IPO9Q96P70 1041 aaKnown RBP12.18□□□□□ -0.46
CNEP1R1-206ENST00000565556 MYH16Q9H6N6 1097 aa12.18□□□□□ -0.46
CNEP1R1-206ENST00000565556 COL14A1Q05707 1796 aaKnown RBP12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 USHBP1Q8N6Y0 703 aa12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 NLRP2Q9NX02 1062 aa12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 FAM83GA6ND36 823 aa12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
CNEP1R1-206ENST00000565556 MTHFSDQ2M296 383 aaKnown RBP12.16□□□□□ -0.46
CNEP1R1-206ENST00000565556 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
CNEP1R1-206ENST00000565556 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
CNEP1R1-206ENST00000565556 COL5A2P05997 1499 aaPredicted RBP12.15□□□□□ -0.46
CNEP1R1-206ENST00000565556 EVA1CP58658 441 aa12.15□□□□□ -0.46
CNEP1R1-206ENST00000565556 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.46
CNEP1R1-206ENST00000565556 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
CNEP1R1-206ENST00000565556 JCADQ9P266 1359 aa12.14□□□□□ -0.47
CNEP1R1-206ENST00000565556 RRP1P56182 461 aaKnown RBP12.14□□□□□ -0.47
CNEP1R1-206ENST00000565556 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
CNEP1R1-206ENST00000565556 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
CNEP1R1-206ENST00000565556 GNAT3A8MTJ3 354 aa12.14□□□□□ -0.47
CNEP1R1-206ENST00000565556 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 TATP17735 454 aaPredicted RBP12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 GNAI1P63096 354 aa12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 RTL5Q5HYW3 569 aaPredicted RBP12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 TOM1L2Q6ZVM7 507 aa12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 CARD10Q9BWT7 1032 aa12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.477e-6■■□□□ 12.8
CNEP1R1-206ENST00000565556 ZBTB47Q9UFB7 747 aaPredicted RBP12.13□□□□□ -0.47
CNEP1R1-206ENST00000565556 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
CNEP1R1-206ENST00000565556 NBR1Q14596 966 aa12.12□□□□□ -0.47
CNEP1R1-206ENST00000565556 BTG4Q9NY30 223 aa12.12□□□□□ -0.47
CNEP1R1-206ENST00000565556 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 SPG7Q9UQ90 795 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 SPATA31A6Q5VVP1 1343 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 CRB1P82279 1406 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 ZNF853P0CG23 659 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 AKAP4Q5JQC9 854 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 C1orf141Q5JVX7 400 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 ZNF530Q6P9A1 599 aaPredicted RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 STRN4Q9NRL3 753 aa12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
CNEP1R1-206ENST00000565556 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 ADAMTS2O95450 1211 aa12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 LARP1Q6PKG0 1096 aaKnown RBP12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 MCM10Q7L590 875 aa12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 THUMPD2Q9BTF0 503 aaKnown RBP12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 NWD2Q9ULI1 1742 aa12.1□□□□□ -0.47
CNEP1R1-206ENST00000565556 DCTN1Q14203 1278 aa12.09□□□□□ -0.47
CNEP1R1-206ENST00000565556 LAS1LQ9Y4W2 734 aaKnown RBP12.09□□□□□ -0.47
CNEP1R1-206ENST00000565556 PKD1L3Q7Z443 1732 aa12.09□□□□□ -0.47
CNEP1R1-206ENST00000565556 MS4A1P11836 297 aa12.08□□□□□ -0.47
CNEP1R1-206ENST00000565556 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.47
CNEP1R1-206ENST00000565556 BABAM1Q9NWV8 329 aa12.08□□□□□ -0.47
CNEP1R1-206ENST00000565556 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
CNEP1R1-206ENST00000565556 MEGF6O75095 1541 aa12.08□□□□□ -0.48
CNEP1R1-206ENST00000565556 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
CNEP1R1-206ENST00000565556 CHL1O00533 1208 aa12.08□□□□□ -0.48
CNEP1R1-206ENST00000565556 IL2RBP14784 551 aa12.08□□□□□ -0.48
CNEP1R1-206ENST00000565556 HSPA1LP34931 641 aa12.07□□□□□ -0.48
CNEP1R1-206ENST00000565556 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
CNEP1R1-206ENST00000565556 MBIPQ9NS73 344 aa12.07□□□□□ -0.48
CNEP1R1-206ENST00000565556 HSP90AB1P08238 724 aaKnown RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 EXOSC9Q06265 439 aaKnown RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 IFNL2Q8IZJ0 200 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 EXOC6Q8TAG9 804 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 CEMIPQ8WUJ3 1361 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 ZNF428Q96B54 188 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 SLIT2O94813 1529 aa12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 TAF7Q15545 349 aaPredicted RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 ZCRB1Q8TBF4 217 aaKnown RBP12.06□□□□□ -0.48
CNEP1R1-206ENST00000565556 RNMTO43148 476 aaKnown RBP12.05□□□□□ -0.48
CNEP1R1-206ENST00000565556 PHKG2P15735 406 aa12.05□□□□□ -0.48
CNEP1R1-206ENST00000565556 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
CNEP1R1-206ENST00000565556 ADAMTS7Q9UKP4 1686 aa12.05□□□□□ -0.48
CNEP1R1-206ENST00000565556 PCDH11XQ9BZA7 1347 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 PCDH11YQ9BZA8 1340 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 TEFQ10587 303 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 NGLY1Q96IV0 654 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 TSPYL4Q9UJ04 414 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 SCN11AQ9UI33 1791 aa12.04□□□□□ -0.48
CNEP1R1-206ENST00000565556 RARSP54136 660 aaKnown RBP12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 MPRIPQ6WCQ1 1025 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 DCAF5Q96JK2 942 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 LGR6Q9HBX8 967 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 PDE4AP27815 886 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 UNC5CLQ8IV45 518 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 USP35Q9P2H5 1018 aa12.03□□□□□ -0.48
CNEP1R1-206ENST00000565556 WNK3Q9BYP7 1800 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms