RNA–Protein interactions for RNA: ENST00000565503.5

RPUSD1-206, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 3

Gene RPUSD1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-206ENST00000565503 GPR162Q16538 588 aa30.13■■■□□ 2.41
RPUSD1-206ENST00000565503 TFCP2L1Q9NZI6 479 aa30.13■■■□□ 2.41
RPUSD1-206ENST00000565503 TONSLQ96HA7 1378 aa30.13■■■□□ 2.41
RPUSD1-206ENST00000565503 SYTL4Q96C24 671 aaPredicted RBP30.12■■■□□ 2.41
RPUSD1-206ENST00000565503 NSD2O96028 1365 aa30.12■■■□□ 2.41
RPUSD1-206ENST00000565503 SLC24A1O60721 1099 aa30.1■■■□□ 2.41
RPUSD1-206ENST00000565503 AMPHP49418 695 aa30.1■■■□□ 2.41
RPUSD1-206ENST00000565503 ZCRB1Q8TBF4 217 aaKnown RBP30.1■■■□□ 2.41
RPUSD1-206ENST00000565503 TESK2Q96S53 571 aa30.1■■■□□ 2.41
RPUSD1-206ENST00000565503 RTL1A6NKG5 1358 aa30.09■■■□□ 2.41
RPUSD1-206ENST00000565503 MEGF6O75095 1541 aa30.09■■■□□ 2.41
RPUSD1-206ENST00000565503 C1QTNF8P60827 252 aa30.07■■■□□ 2.4
RPUSD1-206ENST00000565503 KLHL34Q8N239 644 aa30.07■■■□□ 2.4
RPUSD1-206ENST00000565503 KCNQ4P56696 695 aa30.06■■■□□ 2.4
RPUSD1-206ENST00000565503 CGNL1Q0VF96 1302 aa30.05■■■□□ 2.4
RPUSD1-206ENST00000565503 ST20-MTHFSA0A0A6YYL1 179 aa30.04■■■□□ 2.4
RPUSD1-206ENST00000565503 CCNL1Q9UK58 526 aaPredicted RBP30.04■■■□□ 2.4
RPUSD1-206ENST00000565503 SENP3-EIF4A1A0A087X0R7 540 aa30.02■■■□□ 2.4
RPUSD1-206ENST00000565503 FBLN1P23142 703 aa30.02■■■□□ 2.4
RPUSD1-206ENST00000565503 USP47Q96K76 1375 aa30.02■■■□□ 2.4
RPUSD1-206ENST00000565503 SMG6Q86US8 1419 aaKnown RBP30■■■□□ 2.39
RPUSD1-206ENST00000565503 PELP1Q8IZL8 1130 aaKnown RBP30■■■□□ 2.39
RPUSD1-206ENST00000565503 C5P01031 1676 aa30■■■□□ 2.39
RPUSD1-206ENST00000565503 NBPF6Q5VWK0 638 aa29.99■■■□□ 2.39
RPUSD1-206ENST00000565503 NLGN2Q8NFZ4 835 aa29.99■■■□□ 2.39
RPUSD1-206ENST00000565503 NBPF4Q96M43 638 aa29.99■■■□□ 2.39
RPUSD1-206ENST00000565503 TAF1LQ8IZX4 1826 aa29.98■■■□□ 2.39
RPUSD1-206ENST00000565503 HMGB2P26583 209 aaKnown RBP29.97■■■□□ 2.39
RPUSD1-206ENST00000565503 RAPGEF4Q8WZA2 1011 aa29.97■■■□□ 2.39
RPUSD1-206ENST00000565503 RRS1Q15050 365 aaKnown RBP29.96■■■□□ 2.39
RPUSD1-206ENST00000565503 KIF20BQ96Q89 1820 aa29.96■■■□□ 2.39
RPUSD1-206ENST00000565503 FYB1O15117 783 aa29.95■■■□□ 2.39
RPUSD1-206ENST00000565503 GIGYF1O75420 1035 aaPredicted RBP29.95■■■□□ 2.39
RPUSD1-206ENST00000565503 COL23A1Q86Y22 540 aaPredicted RBP29.95■■■□□ 2.39
RPUSD1-206ENST00000565503 MSH5O43196 834 aa29.94■■■□□ 2.38
RPUSD1-206ENST00000565503 GRIN3BO60391 1043 aa29.94■■■□□ 2.38
RPUSD1-206ENST00000565503 USHBP1Q8N6Y0 703 aa29.93■■■□□ 2.38
RPUSD1-206ENST00000565503 TATP17735 454 aaPredicted RBP29.92■■■□□ 2.38
RPUSD1-206ENST00000565503 GGNBP2Q9H3C7 697 aa29.92■■■□□ 2.38
RPUSD1-206ENST00000565503 PCDH11XQ9BZA7 1347 aa29.92■■■□□ 2.38
RPUSD1-206ENST00000565503 PCDH11YQ9BZA8 1340 aa29.92■■■□□ 2.38
RPUSD1-206ENST00000565503 INSRP06213 1382 aa29.91■■■□□ 2.38
RPUSD1-206ENST00000565503 KIF24Q5T7B8 1368 aa29.91■■■□□ 2.38
RPUSD1-206ENST00000565503 ITGB4P16144 1822 aa29.91■■■□□ 2.38
RPUSD1-206ENST00000565503 YBX3P16989 372 aaKnown RBP eCLIP29.89■■■□□ 2.38
RPUSD1-206ENST00000565503 TMF1P82094 1093 aa29.89■■■□□ 2.38
RPUSD1-206ENST00000565503 FLAD1Q8NFF5 587 aa29.89■■■□□ 2.38
RPUSD1-206ENST00000565503 FLT4P35916 1363 aa29.89■■■□□ 2.37
RPUSD1-206ENST00000565503 PALLDQ8WX93 1383 aa29.87■■■□□ 2.37
RPUSD1-206ENST00000565503 CEP350Q5VT06 3117 aa29.86■■■□□ 2.37
RPUSD1-206ENST00000565503 PKD1L3Q7Z443 1732 aa29.86■■■□□ 2.37
RPUSD1-206ENST00000565503 TOGARAM1Q9Y4F4 1720 aa29.86■■■□□ 2.37
RPUSD1-206ENST00000565503 HSP90AB2PQ58FF8 381 aa29.86■■■□□ 2.37
RPUSD1-206ENST00000565503 MSL1Q68DK7 614 aa29.85■■■□□ 2.37
RPUSD1-206ENST00000565503 CD2APQ9Y5K6 639 aa29.85■■■□□ 2.37
RPUSD1-206ENST00000565503 C4BP0C0L5 1744 aa29.85■■■□□ 2.37
RPUSD1-206ENST00000565503 UBR3Q6ZT12 1888 aa29.83■■■□□ 2.37
RPUSD1-206ENST00000565503 MPRIPQ6WCQ1 1025 aa29.82■■■□□ 2.36
RPUSD1-206ENST00000565503 CYP27B1O15528 508 aa29.81■■■□□ 2.36
RPUSD1-206ENST00000565503 CDCA8Q53HL2 280 aa29.81■■■□□ 2.36
RPUSD1-206ENST00000565503 SMARCC1Q92922 1105 aaPredicted RBP29.81■■■□□ 2.36
RPUSD1-206ENST00000565503 ANKRD26Q9UPS8 1709 aa29.79■■■□□ 2.36
RPUSD1-206ENST00000565503 NCAPD2Q15021 1401 aa29.79■■■□□ 2.36
RPUSD1-206ENST00000565503 NSD3Q9BZ95 1437 aa29.78■■■□□ 2.36
RPUSD1-206ENST00000565503 MAP2P11137 1827 aaKnown RBP29.77■■■□□ 2.36
RPUSD1-206ENST00000565503 AK7Q96M32 723 aa29.76■■■□□ 2.35
RPUSD1-206ENST00000565503 ATP10DQ9P241 1426 aa29.76■■■□□ 2.35
RPUSD1-206ENST00000565503 NKX1-1Q15270 411 aaPredicted RBP29.74■■■□□ 2.35
RPUSD1-206ENST00000565503 PIGBQ92521 554 aa29.72■■■□□ 2.35
RPUSD1-206ENST00000565503 EMILIN1Q9Y6C2 1016 aa29.72■■■□□ 2.35
RPUSD1-206ENST00000565503 SPG7Q9UQ90 795 aa29.71■■■□□ 2.35
RPUSD1-206ENST00000565503 ADCY9O60503 1353 aa29.7■■■□□ 2.35
RPUSD1-206ENST00000565503 CARD14Q9BXL6 1004 aa29.7■■■□□ 2.35
RPUSD1-206ENST00000565503 SSFA2P28290 1259 aa29.69■■■□□ 2.34
RPUSD1-206ENST00000565503 AMIGO3Q86WK7 504 aa29.69■■■□□ 2.34
RPUSD1-206ENST00000565503 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.68■■■□□ 2.34
RPUSD1-206ENST00000565503 PHF14O94880 888 aa29.67■■■□□ 2.34
RPUSD1-206ENST00000565503 GPBP1L1Q9HC44 474 aaPredicted RBP29.67■■■□□ 2.34
RPUSD1-206ENST00000565503 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.67■■■□□ 2.34
RPUSD1-206ENST00000565503 LOC102724428A0A0B4J2F2 783 aa29.66■■■□□ 2.34
RPUSD1-206ENST00000565503 SIK1P57059 783 aa29.66■■■□□ 2.34
RPUSD1-206ENST00000565503 WASHC2AQ641Q2 1341 aa29.66■■■□□ 2.34
RPUSD1-206ENST00000565503 IGSF1Q8N6C5 1336 aa29.65■■■□□ 2.34
RPUSD1-206ENST00000565503 PPM1GO15355 546 aaPredicted RBP29.63■■■□□ 2.33
RPUSD1-206ENST00000565503 LINC00116Q8NCU8 138 aa29.63■■■□□ 2.33
RPUSD1-206ENST00000565503 TMOD3Q9NYL9 352 aa29.63■■■□□ 2.33
RPUSD1-206ENST00000565503 EYA1Q99502 592 aa29.62■■■□□ 2.33
RPUSD1-206ENST00000565503 KIF13BQ9NQT8 1826 aa29.6■■■□□ 2.33
RPUSD1-206ENST00000565503 SMIM5Q71RC9 77 aa29.6■■■□□ 2.33
RPUSD1-206ENST00000565503 PLEKHG2Q9H7P9 1386 aa29.6■■■□□ 2.33
RPUSD1-206ENST00000565503 IFNL2Q8IZJ0 200 aa29.59■■■□□ 2.33
RPUSD1-206ENST00000565503 GNPATO15228 680 aa29.58■■■□□ 2.33
RPUSD1-206ENST00000565503 PHKG2P15735 406 aa29.58■■■□□ 2.33
RPUSD1-206ENST00000565503 ZNF831Q5JPB2 1677 aa29.58■■■□□ 2.33
RPUSD1-206ENST00000565503 CICQ96RK0 1608 aaPredicted RBP29.58■■■□□ 2.33
RPUSD1-206ENST00000565503 ASAP1Q9ULH1 1129 aa29.58■■■□□ 2.33
RPUSD1-206ENST00000565503 ITPK1Q13572 414 aa29.57■■■□□ 2.32
RPUSD1-206ENST00000565503 ATP6V1AP38606 617 aa29.56■■■□□ 2.32
RPUSD1-206ENST00000565503 IFFO2Q5TF58 517 aa29.56■■■□□ 2.32
RPUSD1-206ENST00000565503 POLKQ9UBT6 870 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms