RNA–Protein interactions for RNA: ENST00000565215.1

LINC01227-204, Transcript of long intergenic non-protein coding RNA 1227, humanhuman

TSL 3

Gene LINC01227, Length 295 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01227-204ENST00000565215 GFRA3O60609 400 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 GTF2IP78347 998 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 USP4Q13107 963 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 CRTC2Q53ET0 693 aaPredicted RBP6.81□□□□□ -1.32
LINC01227-204ENST00000565215 VRTNQ9H8Y1 702 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 PCDHGA11Q9Y5H2 935 aa6.81□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L15C9J2P7 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L10C9JJH3 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L13C9JLJ4 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L12C9JPN9 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L11C9JVI0 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L21D6R901 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L18D6R9N7 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L22D6RA61 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L17D6RBQ6 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L19D6RCP7 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L20D6RJB6 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 PPP1R15AO75807 674 aaPredicted RBP6.8□□□□□ -1.32
LINC01227-204ENST00000565215 MYCP01106 439 aaPredicted RBP6.8□□□□□ -1.32
LINC01227-204ENST00000565215 AVPP01185 164 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 USP17L24Q0WX57 530 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 OGFOD1Q8N543 542 aa6.8□□□□□ -1.32
LINC01227-204ENST00000565215 KDF1Q8NAX2 398 aaPredicted RBP6.8□□□□□ -1.32
LINC01227-204ENST00000565215 FAM196BA6NMK8 535 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 ATG7O95352 703 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
LINC01227-204ENST00000565215 ADH1AP07327 375 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 RASA1P20936 1047 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 PTK7Q13308 1070 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 Q6ZVU0 165 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 SIRT1Q96EB6 747 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 ZNF594Q96JF6 807 aaPredicted RBP6.79□□□□□ -1.32
LINC01227-204ENST00000565215 ZMIZ1Q9ULJ6 1067 aa6.79□□□□□ -1.32
LINC01227-204ENST00000565215 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
LINC01227-204ENST00000565215 DKK1O94907 266 aa6.78□□□□□ -1.32
LINC01227-204ENST00000565215 MEIOBQ8N635 442 aa6.78□□□□□ -1.32
LINC01227-204ENST00000565215 AGBL1Q96MI9 1066 aa6.78□□□□□ -1.32
LINC01227-204ENST00000565215 DNAAF2Q9NVR5 837 aaKnown RBP6.78□□□□□ -1.32
LINC01227-204ENST00000565215 CAPN5O15484 640 aaPredicted RBP6.77□□□□□ -1.33
LINC01227-204ENST00000565215 DGAT1O75907 488 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 ATP1A2P50993 1020 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 SCNN1DP51172 638 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 PKDCCQ504Y2 493 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 LARP1Q6PKG0 1096 aaKnown RBP6.77□□□□□ -1.33
LINC01227-204ENST00000565215 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 SIX5Q8N196 739 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 ARXQ96QS3 562 aa6.77□□□□□ -1.33
LINC01227-204ENST00000565215 NOVA2Q9UNW9 492 aaKnown RBP6.77□□□□□ -1.33
LINC01227-204ENST00000565215 TMEM229AB2RXF0 380 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 PSME1Q06323 249 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 ELOAQ14241 798 aaKnown RBP6.76□□□□□ -1.33
LINC01227-204ENST00000565215 LARGE2Q8N3Y3 721 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 RETREG2Q8NC44 543 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 TPCN2Q8NHX9 752 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 STK32AQ8WU08 396 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 IRX2Q9BZI1 471 aaPredicted RBP6.76□□□□□ -1.33
LINC01227-204ENST00000565215 ETNK1Q9HBU6 452 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 ARHGEF10LQ9HCE6 1279 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 RAB6BQ9NRW1 208 aa6.76□□□□□ -1.33
LINC01227-204ENST00000565215 SMCPP49901 116 aaPredicted RBP6.75□□□□□ -1.33
LINC01227-204ENST00000565215 DPYDQ12882 1025 aa6.75□□□□□ -1.33
LINC01227-204ENST00000565215 LAPTM4AQ15012 233 aa6.75□□□□□ -1.33
LINC01227-204ENST00000565215 CCDC102BQ68D86 513 aa6.75□□□□□ -1.33
LINC01227-204ENST00000565215 ANKMY2Q8IV38 441 aa6.75□□□□□ -1.33
LINC01227-204ENST00000565215 TRIM52Q96A61 297 aa6.75□□□□□ -1.33
LINC01227-204ENST00000565215 ESF1Q9H501 851 aaKnown RBP6.75□□□□□ -1.33
LINC01227-204ENST00000565215 GNRH1P01148 92 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 IL2RAP01589 272 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 BMP1P13497 986 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 PTGIRP43119 386 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 GDF10P55107 478 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 RELBQ01201 579 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 CTC1Q2NKJ3 1217 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 TMEM164Q5U3C3 297 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 LINC00528Q8N1L1 170 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 CRIPAKQ8N1N5 446 aa6.74□□□□□ -1.33
LINC01227-204ENST00000565215 CARNS1A5YM72 827 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 TMEM88BA6NKF7 163 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 SFI1A8K8P3 1242 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 WASLO00401 505 aaPredicted RBP6.73□□□□□ -1.33
LINC01227-204ENST00000565215 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
LINC01227-204ENST00000565215 ZNF395Q9H8N7 513 aaPredicted RBP6.73□□□□□ -1.33
LINC01227-204ENST00000565215 ZNF358Q9NW07 568 aa6.73□□□□□ -1.33
LINC01227-204ENST00000565215 A0A1W2PRU2 124 aa6.72□□□□□ -1.33
LINC01227-204ENST00000565215 INHAP05111 366 aa6.72□□□□□ -1.33
LINC01227-204ENST00000565215 FAM69CQ0P6D2 419 aa6.72□□□□□ -1.33
LINC01227-204ENST00000565215 CLN3Q13286 438 aa6.72□□□□□ -1.33
LINC01227-204ENST00000565215 MRPL14Q6P1L8 145 aaKnown RBP6.72□□□□□ -1.33
LINC01227-204ENST00000565215 HRH3Q9Y5N1 445 aa6.72□□□□□ -1.33
LINC01227-204ENST00000565215 ACIN1Q9UKV3 1341 aaKnown RBP6.72□□□□□ -1.33
LINC01227-204ENST00000565215 LCE2BO14633 110 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 AXIN1O15169 862 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 SPINT1O43278 529 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 CSB-PGBD3P0DP91 1061 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 SEC13P55735 322 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 FAM200AQ8TCP9 573 aa6.71□□□□□ -1.34
LINC01227-204ENST00000565215 TSEN34Q9BSV6 310 aaKnown RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms