RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 YY1P25490 414 aa12.01□□□□□ -0.49
CAPN3-213ENST00000565173 AKT1S1Q96B36 256 aa12.01□□□□□ -0.49
CAPN3-213ENST00000565173 HSP90AB2PQ58FF8 381 aa12□□□□□ -0.49
CAPN3-213ENST00000565173 SLC27A3Q5K4L6 730 aa12□□□□□ -0.49
CAPN3-213ENST00000565173 SYT17Q9BSW7 474 aa12□□□□□ -0.49
CAPN3-213ENST00000565173 FHDC1Q9C0D6 1143 aaPredicted RBP12□□□□□ -0.49
CAPN3-213ENST00000565173 KCNQ4P56696 695 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 SYTL4Q96C24 671 aaPredicted RBP11.99□□□□□ -0.49
CAPN3-213ENST00000565173 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 INSRP06213 1382 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 KAT6BQ8WYB5 2073 aa11.99□□□□□ -0.49
CAPN3-213ENST00000565173 CGNL1Q0VF96 1302 aa11.98□□□□□ -0.49
CAPN3-213ENST00000565173 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
CAPN3-213ENST00000565173 PNPLA7Q6ZV29 1317 aa11.97□□□□□ -0.49
CAPN3-213ENST00000565173 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
CAPN3-213ENST00000565173 ARXQ96QS3 562 aa11.97□□□□□ -0.49
CAPN3-213ENST00000565173 DOT1LQ8TEK3 1739 aa11.97□□□□□ -0.49
CAPN3-213ENST00000565173 FLT4P35916 1363 aa11.96□□□□□ -0.49
CAPN3-213ENST00000565173 KIF20BQ96Q89 1820 aa11.96□□□□□ -0.49
CAPN3-213ENST00000565173 RAPGEF4Q8WZA2 1011 aa11.96□□□□□ -0.49
CAPN3-213ENST00000565173 EMILIN1Q9Y6C2 1016 aa11.96□□□□□ -0.49
CAPN3-213ENST00000565173 LY75O60449 1722 aa11.96□□□□□ -0.49
CAPN3-213ENST00000565173 NSD3Q9BZ95 1437 aa11.95□□□□□ -0.5
CAPN3-213ENST00000565173 TATP17735 454 aaPredicted RBP11.95□□□□□ -0.5
CAPN3-213ENST00000565173 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
CAPN3-213ENST00000565173 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
CAPN3-213ENST00000565173 QSER1Q2KHR3 1735 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 MAP3K5Q99683 1374 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 CLSPNQ9HAW4 1339 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 CYP27B1O15528 508 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 TFCP2L1Q9NZI6 479 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 COL24A1Q17RW2 1714 aa11.94□□□□□ -0.5
CAPN3-213ENST00000565173 CCNL1Q9UK58 526 aaPredicted RBP11.93□□□□□ -0.5
CAPN3-213ENST00000565173 NCAPD2Q15021 1401 aa11.93□□□□□ -0.5
CAPN3-213ENST00000565173 TUBGCP6Q96RT7 1819 aa11.93□□□□□ -0.5
CAPN3-213ENST00000565173 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
CAPN3-213ENST00000565173 PCDH11XQ9BZA7 1347 aa11.92□□□□□ -0.5
CAPN3-213ENST00000565173 PCDH11YQ9BZA8 1340 aa11.92□□□□□ -0.5
CAPN3-213ENST00000565173 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-213ENST00000565173 COL23A1Q86Y22 540 aaPredicted RBP11.91□□□□□ -0.5
CAPN3-213ENST00000565173 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
CAPN3-213ENST00000565173 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
CAPN3-213ENST00000565173 ANKRD26Q9UPS8 1709 aa11.91□□□□□ -0.5
CAPN3-213ENST00000565173 PPM1GO15355 546 aaPredicted RBP11.9□□□□□ -0.5
CAPN3-213ENST00000565173 POLD1P28340 1107 aa11.9□□□□□ -0.5
CAPN3-213ENST00000565173 MPRIPQ6WCQ1 1025 aa11.9□□□□□ -0.5
CAPN3-213ENST00000565173 EYA1Q99502 592 aa11.9□□□□□ -0.5
CAPN3-213ENST00000565173 ZNF784Q8NCA9 323 aaPredicted RBP11.89□□□□□ -0.51
CAPN3-213ENST00000565173 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
CAPN3-213ENST00000565173 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
CAPN3-213ENST00000565173 PIGBQ92521 554 aa11.88□□□□□ -0.51
CAPN3-213ENST00000565173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAPN3-213ENST00000565173 PALLDQ8WX93 1383 aa11.88□□□□□ -0.51
CAPN3-213ENST00000565173 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
CAPN3-213ENST00000565173 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
CAPN3-213ENST00000565173 AMIGO3Q86WK7 504 aa11.87□□□□□ -0.51
CAPN3-213ENST00000565173 NLGN2Q8NFZ4 835 aa11.87□□□□□ -0.51
CAPN3-213ENST00000565173 SPG7Q9UQ90 795 aa11.87□□□□□ -0.51
CAPN3-213ENST00000565173 ITGB4P16144 1822 aa11.87□□□□□ -0.51
CAPN3-213ENST00000565173 C5P01031 1676 aa11.87□□□□□ -0.51
CAPN3-213ENST00000565173 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
CAPN3-213ENST00000565173 GPR162Q16538 588 aa11.86□□□□□ -0.51
CAPN3-213ENST00000565173 SMARCC1Q92922 1105 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-213ENST00000565173 POLR3GLQ9BT43 218 aa11.86□□□□□ -0.51
CAPN3-213ENST00000565173 PANK3Q9H999 370 aa11.86□□□□□ -0.51
CAPN3-213ENST00000565173 TAF1LQ8IZX4 1826 aa11.86□□□□□ -0.51
CAPN3-213ENST00000565173 MSH5O43196 834 aa11.85□□□□□ -0.51
CAPN3-213ENST00000565173 TNNT2P45379 298 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-213ENST00000565173 EIF4G2P78344 907 aaKnown RBP eCLIP11.85□□□□□ -0.51
CAPN3-213ENST00000565173 KLHL34Q8N239 644 aa11.85□□□□□ -0.51
CAPN3-213ENST00000565173 CHD4Q14839 1912 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 PHKG2P15735 406 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
CAPN3-213ENST00000565173 MSL1Q68DK7 614 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 SMIM5Q71RC9 77 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 FLAD1Q8NFF5 587 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 ASAP1Q9ULH1 1129 aa11.84□□□□□ -0.51
CAPN3-213ENST00000565173 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 LOC102724428A0A0B4J2F2 783 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 SIK1P57059 783 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 IFNL2Q8IZJ0 200 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 LINC00116Q8NCU8 138 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 IGSF1Q8N6C5 1336 aa11.83□□□□□ -0.52
CAPN3-213ENST00000565173 YBX3P16989 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
CAPN3-213ENST00000565173 ITPK1Q13572 414 aa11.82□□□□□ -0.52
CAPN3-213ENST00000565173 ATG3Q9NT62 314 aa11.82□□□□□ -0.52
CAPN3-213ENST00000565173 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
CAPN3-213ENST00000565173 PLEKHG2Q9H7P9 1386 aa11.81□□□□□ -0.52
CAPN3-213ENST00000565173 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.81□□□□□ -0.52
CAPN3-213ENST00000565173 AK7Q96M32 723 aa11.81□□□□□ -0.52
CAPN3-213ENST00000565173 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
CAPN3-213ENST00000565173 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
CAPN3-213ENST00000565173 PELP1Q8IZL8 1130 aaKnown RBP11.8□□□□□ -0.52
CAPN3-213ENST00000565173 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
CAPN3-213ENST00000565173 ERVV-2B6SEH9 535 aa11.79□□□□□ -0.52
CAPN3-213ENST00000565173 PHF14O94880 888 aa11.79□□□□□ -0.52
CAPN3-213ENST00000565173 SSFA2P28290 1259 aa11.79□□□□□ -0.52
CAPN3-213ENST00000565173 ATP6V1AP38606 617 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms