RNA–Protein interactions for RNA: ENST00000565142.1

ITGAM-204, Transcript of integrin subunit alpha M, humanhuman

TSL 3

Gene ITGAM, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGAM-204ENST00000565142 TOGARAM1Q9Y4F4 1720 aa22.3■■□□□ 1.16
ITGAM-204ENST00000565142 LY75O60449 1722 aa22.29■■□□□ 1.16
ITGAM-204ENST00000565142 NSD2O96028 1365 aa22.28■■□□□ 1.16
ITGAM-204ENST00000565142 PROM2Q8N271 834 aa22.28■■□□□ 1.16
ITGAM-204ENST00000565142 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
ITGAM-204ENST00000565142 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
ITGAM-204ENST00000565142 QSER1Q2KHR3 1735 aa22.26■■□□□ 1.15
ITGAM-204ENST00000565142 NBPF14Q5TI25 921 aa22.25■■□□□ 1.15
ITGAM-204ENST00000565142 KAT6BQ8WYB5 2073 aa22.25■■□□□ 1.15
ITGAM-204ENST00000565142 TUBGCP6Q96RT7 1819 aa22.24■■□□□ 1.15
ITGAM-204ENST00000565142 TXNRD1Q16881 649 aa22.23■■□□□ 1.15
ITGAM-204ENST00000565142 PANK3Q9H999 370 aa22.23■■□□□ 1.15
ITGAM-204ENST00000565142 KIF7Q2M1P5 1343 aa22.23■■□□□ 1.15
ITGAM-204ENST00000565142 WASHC2AQ641Q2 1341 aa22.23■■□□□ 1.15
ITGAM-204ENST00000565142 DDX54Q8TDD1 881 aaKnown RBP22.22■■□□□ 1.15
ITGAM-204ENST00000565142 POLKQ9UBT6 870 aa22.22■■□□□ 1.15
ITGAM-204ENST00000565142 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
ITGAM-204ENST00000565142 ITGB4P16144 1822 aa22.21■■□□□ 1.15
ITGAM-204ENST00000565142 RAPGEF4Q8WZA2 1011 aa22.2■■□□□ 1.14
ITGAM-204ENST00000565142 PCDH11XQ9BZA7 1347 aa22.18■■□□□ 1.14
ITGAM-204ENST00000565142 PCDH11YQ9BZA8 1340 aa22.18■■□□□ 1.14
ITGAM-204ENST00000565142 TATP17735 454 aaPredicted RBP22.18■■□□□ 1.14
ITGAM-204ENST00000565142 PPM1GO15355 546 aaPredicted RBP22.16■■□□□ 1.14
ITGAM-204ENST00000565142 PLEKHG2Q9H7P9 1386 aa22.15■■□□□ 1.14
ITGAM-204ENST00000565142 C5P01031 1676 aa22.15■■□□□ 1.14
ITGAM-204ENST00000565142 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
ITGAM-204ENST00000565142 EYA1Q99502 592 aa22.14■■□□□ 1.13
ITGAM-204ENST00000565142 COL24A1Q17RW2 1714 aa22.14■■□□□ 1.13
ITGAM-204ENST00000565142 TAF1LQ8IZX4 1826 aa22.13■■□□□ 1.13
ITGAM-204ENST00000565142 EIF4A2Q14240 407 aaKnown RBP22.13■■□□□ 1.13
ITGAM-204ENST00000565142 SLC15A2Q16348 729 aa22.13■■□□□ 1.13
ITGAM-204ENST00000565142 PDGFDQ9GZP0 370 aaPredicted RBP22.13■■□□□ 1.13
ITGAM-204ENST00000565142 LRRC4BQ9NT99 713 aa22.13■■□□□ 1.13
ITGAM-204ENST00000565142 IGSF1Q8N6C5 1336 aa22.12■■□□□ 1.13
ITGAM-204ENST00000565142 CYP27B1O15528 508 aa22.12■■□□□ 1.13
ITGAM-204ENST00000565142 PRIM1P49642 420 aaKnown RBP22.12■■□□□ 1.13
ITGAM-204ENST00000565142 AMER1Q5JTC6 1135 aaPredicted RBP22.12■■□□□ 1.13
ITGAM-204ENST00000565142 STK32BQ9NY57 414 aa22.12■■□□□ 1.13
ITGAM-204ENST00000565142 ZNF827Q17R98 1081 aa22.1■■□□□ 1.13
ITGAM-204ENST00000565142 SYTL4Q96C24 671 aaPredicted RBP22.1■■□□□ 1.13
ITGAM-204ENST00000565142 SLC27A3Q5K4L6 730 aa22.09■■□□□ 1.13
ITGAM-204ENST00000565142 SPON1Q9HCB6 807 aa22.09■■□□□ 1.13
ITGAM-204ENST00000565142 KNSTRNQ9Y448 316 aa22.09■■□□□ 1.13
ITGAM-204ENST00000565142 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
ITGAM-204ENST00000565142 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
ITGAM-204ENST00000565142 PER1O15534 1290 aaPredicted RBP22.05■■□□□ 1.12
ITGAM-204ENST00000565142 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.12
ITGAM-204ENST00000565142 NKX1-1Q15270 411 aaPredicted RBP22.04■■□□□ 1.12
ITGAM-204ENST00000565142 KDRP35968 1356 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 PALLDQ8WX93 1383 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 NPC1L1Q9UHC9 1359 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 ZBTB7AO95365 584 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 SPG7Q9UQ90 795 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 C4BP0C0L5 1744 aa22.03■■□□□ 1.12
ITGAM-204ENST00000565142 PTGER2P43116 358 aa22.02■■□□□ 1.12
ITGAM-204ENST00000565142 COL3A1P02461 1466 aaPredicted RBP22.02■■□□□ 1.12
ITGAM-204ENST00000565142 KCNQ4P56696 695 aa22.01■■□□□ 1.11
ITGAM-204ENST00000565142 UBR3Q6ZT12 1888 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 PHKG2P15735 406 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 SGIP1Q9BQI5 828 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 MTFR1LQ9H019 292 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
ITGAM-204ENST00000565142 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 PNPLA7Q6ZV29 1317 aa22■■□□□ 1.11
ITGAM-204ENST00000565142 KDM6AO15550 1401 aaPredicted RBP21.99■■□□□ 1.11
ITGAM-204ENST00000565142 VIRMAQ69YN4 1812 aaKnown RBP21.99■■□□□ 1.11
ITGAM-204ENST00000565142 SCN11AQ9UI33 1791 aa21.98■■□□□ 1.11
ITGAM-204ENST00000565142 AEBP1Q8IUX7 1158 aa21.98■■□□□ 1.11
ITGAM-204ENST00000565142 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
ITGAM-204ENST00000565142 IFNL2Q8IZJ0 200 aa21.97■■□□□ 1.11
ITGAM-204ENST00000565142 PPP1R1BQ9UD71 204 aaPredicted RBP21.97■■□□□ 1.11
ITGAM-204ENST00000565142 COL5A3P25940 1745 aaPredicted RBP21.97■■□□□ 1.11
ITGAM-204ENST00000565142 IL13P35225 146 aa21.96■■□□□ 1.11
ITGAM-204ENST00000565142 PIGBQ92521 554 aa21.96■■□□□ 1.11
ITGAM-204ENST00000565142 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
ITGAM-204ENST00000565142 ADAMTS7Q9UKP4 1686 aa21.95■■□□□ 1.1
ITGAM-204ENST00000565142 ATF5Q9Y2D1 282 aaPredicted RBP21.95■■□□□ 1.1
ITGAM-204ENST00000565142 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
ITGAM-204ENST00000565142 MRC1P22897 1456 aa21.92■■□□□ 1.1
ITGAM-204ENST00000565142 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
ITGAM-204ENST00000565142 MAP3K5Q99683 1374 aa21.91■■□□□ 1.1
ITGAM-204ENST00000565142 MTHFSP49914 203 aa21.91■■□□□ 1.1
ITGAM-204ENST00000565142 TMOD3Q9NYL9 352 aa21.91■■□□□ 1.1
ITGAM-204ENST00000565142 SULT6B1Q6IMI4 303 aa21.9■■□□□ 1.1
ITGAM-204ENST00000565142 ZNF530Q6P9A1 599 aaPredicted RBP21.9■■□□□ 1.1
ITGAM-204ENST00000565142 SLC16A10Q8TF71 515 aa21.9■■□□□ 1.1
ITGAM-204ENST00000565142 TFCP2L1Q9NZI6 479 aa21.9■■□□□ 1.1
ITGAM-204ENST00000565142 TJP1Q07157 1748 aa21.89■■□□□ 1.1
ITGAM-204ENST00000565142 AMOTQ4VCS5 1084 aa21.89■■□□□ 1.09
ITGAM-204ENST00000565142 PLEKHO1Q53GL0 409 aaPredicted RBP21.89■■□□□ 1.09
ITGAM-204ENST00000565142 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
ITGAM-204ENST00000565142 HSP90AB1P08238 724 aaKnown RBP21.87■■□□□ 1.09
ITGAM-204ENST00000565142 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
ITGAM-204ENST00000565142 SIK1P57059 783 aa21.86■■□□□ 1.09
ITGAM-204ENST00000565142 FHDC1Q9C0D6 1143 aaPredicted RBP21.86■■□□□ 1.09
ITGAM-204ENST00000565142 ASAP1Q9ULH1 1129 aa21.86■■□□□ 1.09
ITGAM-204ENST00000565142 ERVV-2B6SEH9 535 aa21.85■■□□□ 1.09
ITGAM-204ENST00000565142 COL23A1Q86Y22 540 aaPredicted RBP21.85■■□□□ 1.09
ITGAM-204ENST00000565142 C4AP0C0L4 1744 aa21.84■■□□□ 1.09
ITGAM-204ENST00000565142 AMIGO3Q86WK7 504 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms