RNA–Protein interactions for RNA: ENST00000565124.4

TCF4-227, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 555 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-227ENST00000565124 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
TCF4-227ENST00000565124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.19□□□□□ -0.78
TCF4-227ENST00000565124 KRT28Q7Z3Y7 464 aa10.19□□□□□ -0.78
TCF4-227ENST00000565124 DLG5Q8TDM6 1919 aa10.19□□□□□ -0.78
TCF4-227ENST00000565124 ARHGEF10O15013 1369 aa10.18□□□□□ -0.78
TCF4-227ENST00000565124 C19orf67A6NJJ6 358 aa10.18□□□□□ -0.78
TCF4-227ENST00000565124 ARHGEF1Q92888 912 aaKnown RBP10.18□□□□□ -0.78
TCF4-227ENST00000565124 RGPD5Q99666 1765 aa10.18□□□□□ -0.78
TCF4-227ENST00000565124 FAM208AQ9UK61 1670 aaKnown RBP10.18□□□□□ -0.78
TCF4-227ENST00000565124 MAP3K19Q56UN5 1328 aa10.17□□□□□ -0.78
TCF4-227ENST00000565124 TULP1O00294 542 aaPredicted RBP10.17□□□□□ -0.78
TCF4-227ENST00000565124 SEMA3EO15041 775 aa10.17□□□□□ -0.78
TCF4-227ENST00000565124 PPM1GO15355 546 aaPredicted RBP10.17□□□□□ -0.78
TCF4-227ENST00000565124 PDE4AP27815 886 aa10.17□□□□□ -0.78
TCF4-227ENST00000565124 XPCQ01831 940 aaPredicted RBP10.17□□□□□ -0.78
TCF4-227ENST00000565124 KCNH5Q8NCM2 988 aa10.17□□□□□ -0.78
TCF4-227ENST00000565124 SLAIN2Q9P270 581 aa10.17□□□□□ -0.78
TCF4-227ENST00000565124 CAMTA1Q9Y6Y1 1673 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 U2AF1L5P0DN76 240 aaPredicted RBP10.16□□□□□ -0.78
TCF4-227ENST00000565124 FBLN1P23142 703 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 U2AF1Q01081 240 aaKnown RBP eCLIP10.16□□□□□ -0.78
TCF4-227ENST00000565124 NUTM2GQ5VZR2 741 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 NGEFQ8N5V2 710 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 RGPD2P0DJD1 1756 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 COL18A1P39060 1754 aa10.16□□□□□ -0.78
TCF4-227ENST00000565124 SOS2Q07890 1332 aaPredicted RBP10.15□□□□□ -0.78
TCF4-227ENST00000565124 SPATA31A3Q5VYP0 1347 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 TTLL13PA6NNM8 815 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
TCF4-227ENST00000565124 IL13P35225 146 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 CCDC146Q8IYE0 955 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 RUNDC1Q96C34 613 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 PHLPP1O60346 1717 aa10.15□□□□□ -0.78
TCF4-227ENST00000565124 COL22A1Q8NFW1 1626 aaPredicted RBP10.15□□□□□ -0.79
TCF4-227ENST00000565124 AMPHP49418 695 aa10.14□□□□□ -0.79
TCF4-227ENST00000565124 PDE3BQ13370 1112 aa10.14□□□□□ -0.79
TCF4-227ENST00000565124 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
TCF4-227ENST00000565124 PNNQ9H307 717 aaKnown RBP10.14□□□□□ -0.79
TCF4-227ENST00000565124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.14□□□□□ -0.79
TCF4-227ENST00000565124 MAPK8IP3Q9UPT6 1336 aa10.13□□□□□ -0.79
TCF4-227ENST00000565124 EIF4A2Q14240 407 aaKnown RBP10.13□□□□□ -0.79
TCF4-227ENST00000565124 DDX17Q92841 729 aaKnown RBP10.13□□□□□ -0.79
TCF4-227ENST00000565124 CRISPLD2Q9H0B8 497 aa10.13□□□□□ -0.79
TCF4-227ENST00000565124 COL16A1Q07092 1604 aaPredicted RBP10.13□□□□□ -0.79
TCF4-227ENST00000565124 APAF1O14727 1248 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 FCHSD2O94868 740 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 HOXC9P31274 260 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 TIE1P35590 1138 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 ILDR1Q86SU0 546 aaPredicted RBP10.12□□□□□ -0.79
TCF4-227ENST00000565124 RSPH6AQ9H0K4 717 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 BMP2KQ9NSY1 1161 aaPredicted RBP10.12□□□□□ -0.79
TCF4-227ENST00000565124 LMO7Q8WWI1 1683 aa10.12□□□□□ -0.79
TCF4-227ENST00000565124 VIRMAQ69YN4 1812 aaKnown RBP10.12□□□□□ -0.79
TCF4-227ENST00000565124 ZNF521Q96K83 1311 aa10.11□□□□□ -0.79
TCF4-227ENST00000565124 GALR2O43603 387 aaPredicted RBP10.11□□□□□ -0.79
TCF4-227ENST00000565124 GCP02774 474 aa10.11□□□□□ -0.79
TCF4-227ENST00000565124 HSP90AB2PQ58FF8 381 aa10.11□□□□□ -0.79
TCF4-227ENST00000565124 TRIM35Q9UPQ4 493 aa10.11□□□□□ -0.79
TCF4-227ENST00000565124 KDRP35968 1356 aa10.11□□□□□ -0.79
TCF4-227ENST00000565124 IGSF1Q8N6C5 1336 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 SENP3-EIF4A1A0A087X0R7 540 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 NEFMP07197 916 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 PRKAR2BP31323 418 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 MFSD10Q14728 455 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 ARHGEF25Q86VW2 580 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 TCP11L2Q8N4U5 519 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 IP6K1Q92551 441 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 PLEKHF1Q96S99 279 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 SALL2Q9Y467 1007 aaPredicted RBP10.1□□□□□ -0.79
TCF4-227ENST00000565124 CPDO75976 1380 aa10.1□□□□□ -0.79
TCF4-227ENST00000565124 NCAPD2Q15021 1401 aa10.09□□□□□ -0.79
TCF4-227ENST00000565124 TESPA1A2RU30 521 aaPredicted RBP10.09□□□□□ -0.79
TCF4-227ENST00000565124 CCDC27Q2M243 656 aa10.09□□□□□ -0.79
TCF4-227ENST00000565124 HMOX1P09601 288 aa10.08□□□□□ -0.8
TCF4-227ENST00000565124 DPY19L2Q6NUT2 758 aa10.08□□□□□ -0.8
TCF4-227ENST00000565124 COL14A1Q05707 1796 aaKnown RBP10.08□□□□□ -0.8
TCF4-227ENST00000565124 LRRC37A3O60309 1634 aa10.07□□□□□ -0.8
TCF4-227ENST00000565124 ZBTB7CA1YPR0 619 aa10.07□□□□□ -0.8
TCF4-227ENST00000565124 TOM1O60784 492 aa10.07□□□□□ -0.8
TCF4-227ENST00000565124 TMPOP42166 694 aaKnown RBP10.07□□□□□ -0.8
TCF4-227ENST00000565124 SULT6B1Q6IMI4 303 aa10.07□□□□□ -0.8
TCF4-227ENST00000565124 ZC3H15Q8WU90 426 aaKnown RBP10.07□□□□□ -0.8
TCF4-227ENST00000565124 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 HAX1O00165 279 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 AEBP1Q8IUX7 1158 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 WWC1Q8IX03 1113 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 EYA1Q99502 592 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 RRP7AQ9Y3A4 280 aaKnown RBP10.06□□□□□ -0.8
TCF4-227ENST00000565124 PARP4Q9UKK3 1724 aaKnown RBP10.06□□□□□ -0.8
TCF4-227ENST00000565124 PLCH1Q4KWH8 1693 aa10.06□□□□□ -0.8
TCF4-227ENST00000565124 WNK3Q9BYP7 1800 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 E9PSI1 815 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 ZC3H6P61129 1189 aaKnown RBP10.05□□□□□ -0.8
TCF4-227ENST00000565124 LMOD3Q0VAK6 560 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 PPP1R15BQ5SWA1 713 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 WDR63Q8IWG1 891 aa10.05□□□□□ -0.8
TCF4-227ENST00000565124 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
TCF4-227ENST00000565124 ERBB3P21860 1342 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms