RNA–Protein interactions for RNA: ENST00000565121.1

NEIL1-209, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 1,169 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-209ENST00000565121 ANKRD36BQ8N2N9 1353 aa18.58■□□□□ 0.57
NEIL1-209ENST00000565121 TIMELESSQ9UNS1 1208 aa18.58■□□□□ 0.56
NEIL1-209ENST00000565121 MEGF6O75095 1541 aa18.58■□□□□ 0.56
NEIL1-209ENST00000565121 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
NEIL1-209ENST00000565121 PNPLA7Q6ZV29 1317 aa18.56■□□□□ 0.56
NEIL1-209ENST00000565121 SLC27A3Q5K4L6 730 aa18.56■□□□□ 0.56
NEIL1-209ENST00000565121 NSD2O96028 1365 aa18.55■□□□□ 0.56
NEIL1-209ENST00000565121 UTRNP46939 3433 aa18.55■□□□□ 0.56
NEIL1-209ENST00000565121 SHANK3Q9BYB0 1731 aa18.55■□□□□ 0.56
NEIL1-209ENST00000565121 TMF1P82094 1093 aa18.55■□□□□ 0.56
NEIL1-209ENST00000565121 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
NEIL1-209ENST00000565121 SLC24A1O60721 1099 aa18.54■□□□□ 0.56
NEIL1-209ENST00000565121 KLHL34Q8N239 644 aa18.54■□□□□ 0.56
NEIL1-209ENST00000565121 USP47Q96K76 1375 aa18.54■□□□□ 0.56
NEIL1-209ENST00000565121 HSP90AB2PQ58FF8 381 aa18.53■□□□□ 0.56
NEIL1-209ENST00000565121 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
NEIL1-209ENST00000565121 TFCP2L1Q9NZI6 479 aa18.53■□□□□ 0.56
NEIL1-209ENST00000565121 SLC16A10Q8TF71 515 aa18.52■□□□□ 0.56
NEIL1-209ENST00000565121 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
NEIL1-209ENST00000565121 CCNL1Q9UK58 526 aaPredicted RBP18.51■□□□□ 0.55
NEIL1-209ENST00000565121 RTL1A6NKG5 1358 aa18.51■□□□□ 0.55
NEIL1-209ENST00000565121 LY75O60449 1722 aa18.5■□□□□ 0.55
NEIL1-209ENST00000565121 RAPGEF4Q8WZA2 1011 aa18.5■□□□□ 0.55
NEIL1-209ENST00000565121 CARD14Q9BXL6 1004 aa18.5■□□□□ 0.55
NEIL1-209ENST00000565121 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
NEIL1-209ENST00000565121 QSER1Q2KHR3 1735 aa18.49■□□□□ 0.55
NEIL1-209ENST00000565121 TATP17735 454 aaPredicted RBP18.49■□□□□ 0.55
NEIL1-209ENST00000565121 POLD1P28340 1107 aa18.49■□□□□ 0.55
NEIL1-209ENST00000565121 GPR162Q16538 588 aa18.48■□□□□ 0.55
NEIL1-209ENST00000565121 COL23A1Q86Y22 540 aaPredicted RBP18.48■□□□□ 0.55
NEIL1-209ENST00000565121 CHD4Q14839 1912 aa18.47■□□□□ 0.55
NEIL1-209ENST00000565121 INSRP06213 1382 aa18.47■□□□□ 0.55
NEIL1-209ENST00000565121 MSH5O43196 834 aa18.47■□□□□ 0.55
NEIL1-209ENST00000565121 PELP1Q8IZL8 1130 aaKnown RBP18.47■□□□□ 0.55
NEIL1-209ENST00000565121 NLGN2Q8NFZ4 835 aa18.47■□□□□ 0.55
NEIL1-209ENST00000565121 EMILIN1Q9Y6C2 1016 aa18.47■□□□□ 0.55
NEIL1-209ENST00000565121 CCER1Q8TC90 406 aaPredicted RBP18.46■□□□□ 0.55
NEIL1-209ENST00000565121 SMG6Q86US8 1419 aaKnown RBP18.46■□□□□ 0.55
NEIL1-209ENST00000565121 CGNL1Q0VF96 1302 aa18.46■□□□□ 0.55
NEIL1-209ENST00000565121 KIF20BQ96Q89 1820 aa18.45■□□□□ 0.54
NEIL1-209ENST00000565121 CYP27B1O15528 508 aa18.45■□□□□ 0.54
NEIL1-209ENST00000565121 MSL1Q68DK7 614 aa18.45■□□□□ 0.54
NEIL1-209ENST00000565121 COL24A1Q17RW2 1714 aa18.45■□□□□ 0.54
NEIL1-209ENST00000565121 FLT4P35916 1363 aa18.44■□□□□ 0.54
NEIL1-209ENST00000565121 CDCA8Q53HL2 280 aa18.44■□□□□ 0.54
NEIL1-209ENST00000565121 MPRIPQ6WCQ1 1025 aa18.44■□□□□ 0.54
NEIL1-209ENST00000565121 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
NEIL1-209ENST00000565121 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
NEIL1-209ENST00000565121 PCDH11XQ9BZA7 1347 aa18.42■□□□□ 0.54
NEIL1-209ENST00000565121 PCDH11YQ9BZA8 1340 aa18.42■□□□□ 0.54
NEIL1-209ENST00000565121 GOLGB1Q14789 3259 aaKnown RBP18.41■□□□□ 0.54
NEIL1-209ENST00000565121 SMIM5Q71RC9 77 aa18.41■□□□□ 0.54
NEIL1-209ENST00000565121 PALLDQ8WX93 1383 aa18.4■□□□□ 0.54
NEIL1-209ENST00000565121 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
NEIL1-209ENST00000565121 AMIGO3Q86WK7 504 aa18.39■□□□□ 0.53
NEIL1-209ENST00000565121 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
NEIL1-209ENST00000565121 TOGARAM1Q9Y4F4 1720 aa18.38■□□□□ 0.53
NEIL1-209ENST00000565121 ITGB4P16144 1822 aa18.37■□□□□ 0.53
NEIL1-209ENST00000565121 PIGBQ92521 554 aa18.37■□□□□ 0.53
NEIL1-209ENST00000565121 EYA1Q99502 592 aa18.37■□□□□ 0.53
NEIL1-209ENST00000565121 POLR3GLQ9BT43 218 aa18.37■□□□□ 0.53
NEIL1-209ENST00000565121 C5P01031 1676 aa18.37■□□□□ 0.53
NEIL1-209ENST00000565121 TAF1LQ8IZX4 1826 aa18.36■□□□□ 0.53
NEIL1-209ENST00000565121 WASHC2AQ641Q2 1341 aa18.35■□□□□ 0.53
NEIL1-209ENST00000565121 C1QTNF8P60827 252 aa18.35■□□□□ 0.53
NEIL1-209ENST00000565121 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
NEIL1-209ENST00000565121 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
NEIL1-209ENST00000565121 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
NEIL1-209ENST00000565121 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
NEIL1-209ENST00000565121 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
NEIL1-209ENST00000565121 PKD1L3Q7Z443 1732 aa18.34■□□□□ 0.53
NEIL1-209ENST00000565121 PHF14O94880 888 aa18.33■□□□□ 0.52
NEIL1-209ENST00000565121 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
NEIL1-209ENST00000565121 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
NEIL1-209ENST00000565121 AK7Q96M32 723 aa18.33■□□□□ 0.52
NEIL1-209ENST00000565121 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
NEIL1-209ENST00000565121 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
NEIL1-209ENST00000565121 HSPA5P11021 654 aaKnown RBP18.32■□□□□ 0.52
NEIL1-209ENST00000565121 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
NEIL1-209ENST00000565121 ASAP1Q9ULH1 1129 aa18.32■□□□□ 0.52
NEIL1-209ENST00000565121 C4BP0C0L5 1744 aa18.32■□□□□ 0.52
NEIL1-209ENST00000565121 ANKRD26Q9UPS8 1709 aa18.3■□□□□ 0.52
NEIL1-209ENST00000565121 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.3■□□□□ 0.52
NEIL1-209ENST00000565121 LOC102724428A0A0B4J2F2 783 aa18.3■□□□□ 0.52
NEIL1-209ENST00000565121 SIK1P57059 783 aa18.3■□□□□ 0.52
NEIL1-209ENST00000565121 ITPK1Q13572 414 aa18.3■□□□□ 0.52
NEIL1-209ENST00000565121 EIF4A2Q14240 407 aaKnown RBP18.3■□□□□ 0.52
NEIL1-209ENST00000565121 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
NEIL1-209ENST00000565121 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
NEIL1-209ENST00000565121 PHKG2P15735 406 aa18.29■□□□□ 0.52
NEIL1-209ENST00000565121 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
NEIL1-209ENST00000565121 TMOD3Q9NYL9 352 aa18.29■□□□□ 0.52
NEIL1-209ENST00000565121 CD2APQ9Y5K6 639 aa18.29■□□□□ 0.52
NEIL1-209ENST00000565121 UBR3Q6ZT12 1888 aa18.29■□□□□ 0.52
NEIL1-209ENST00000565121 IFNL2Q8IZJ0 200 aa18.28■□□□□ 0.52
NEIL1-209ENST00000565121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.28■□□□□ 0.52
NEIL1-209ENST00000565121 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.52
NEIL1-209ENST00000565121 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
NEIL1-209ENST00000565121 HMGB2P26583 209 aaKnown RBP18.26■□□□□ 0.51
NEIL1-209ENST00000565121 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms