RNA–Protein interactions for RNA: ENST00000564993.1

PKM-213, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2

Gene PKM, Length 663 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-213ENST00000564993 SHANK3Q9BYB0 1731 aa15.29■□□□□ 0.04
PKM-213ENST00000564993 MEGF6O75095 1541 aa15.29■□□□□ 0.04
PKM-213ENST00000564993 FAM196AQ6ZSG2 479 aa15.29■□□□□ 0.04
PKM-213ENST00000564993 CCDC125Q86Z20 511 aa15.29■□□□□ 0.04
PKM-213ENST00000564993 UPF1Q92900 1129 aaKnown RBP eCLIP15.29■□□□□ 0.04
PKM-213ENST00000564993 ANP32CO43423 234 aa15.28■□□□□ 0.04
PKM-213ENST00000564993 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
PKM-213ENST00000564993 SPG7Q9UQ90 795 aa15.27■□□□□ 0.04
PKM-213ENST00000564993 PCDH11XQ9BZA7 1347 aa15.26■□□□□ 0.03
PKM-213ENST00000564993 PCDH11YQ9BZA8 1340 aa15.26■□□□□ 0.03
PKM-213ENST00000564993 AMOTQ4VCS5 1084 aa15.26■□□□□ 0.03
PKM-213ENST00000564993 ZCRB1Q8TBF4 217 aaKnown RBP15.26■□□□□ 0.03
PKM-213ENST00000564993 EP400Q96L91 3159 aa15.26■□□□□ 0.03
PKM-213ENST00000564993 SULT6B1Q6IMI4 303 aa15.25■□□□□ 0.03
PKM-213ENST00000564993 USHBP1Q8N6Y0 703 aa15.25■□□□□ 0.03
PKM-213ENST00000564993 PNNQ9H307 717 aaKnown RBP15.24■□□□□ 0.03
PKM-213ENST00000564993 PLEKHO1Q53GL0 409 aaPredicted RBP15.23■□□□□ 0.03
PKM-213ENST00000564993 NHSQ6T4R5 1651 aa15.22■□□□□ 0.03
PKM-213ENST00000564993 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
PKM-213ENST00000564993 FCHSD2O94868 740 aa15.22■□□□□ 0.03
PKM-213ENST00000564993 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
PKM-213ENST00000564993 RGPD3A6NKT7 1758 aaPredicted RBP15.21■□□□□ 0.03
PKM-213ENST00000564993 RGPD4Q7Z3J3 1758 aa15.21■□□□□ 0.03
PKM-213ENST00000564993 TNS1Q9HBL0 1735 aaKnown RBP15.21■□□□□ 0.03
PKM-213ENST00000564993 HSP90AB1P08238 724 aaKnown RBP15.21■□□□□ 0.03
PKM-213ENST00000564993 IFNL2Q8IZJ0 200 aa15.2■□□□□ 0.02
PKM-213ENST00000564993 KAT6BQ8WYB5 2073 aa15.2■□□□□ 0.02
PKM-213ENST00000564993 NEFMP07197 916 aa15.19■□□□□ 0.02
PKM-213ENST00000564993 U2AF1L5P0DN76 240 aaPredicted RBP15.19■□□□□ 0.02
PKM-213ENST00000564993 U2AF1Q01081 240 aaKnown RBP eCLIP15.19■□□□□ 0.02
PKM-213ENST00000564993 SF3B2Q13435 895 aaKnown RBP15.19■□□□□ 0.02
PKM-213ENST00000564993 NKX1-1Q15270 411 aaPredicted RBP15.19■□□□□ 0.02
PKM-213ENST00000564993 AEBP1Q8IUX7 1158 aa15.19■□□□□ 0.02
PKM-213ENST00000564993 DOT1LQ8TEK3 1739 aa15.19■□□□□ 0.02
PKM-213ENST00000564993 VIRMAQ69YN4 1812 aaKnown RBP15.19■□□□□ 0.02
PKM-213ENST00000564993 DDX54Q8TDD1 881 aaKnown RBP15.18■□□□□ 0.02
PKM-213ENST00000564993 RSPH6AQ9H0K4 717 aa15.18■□□□□ 0.02
PKM-213ENST00000564993 SCN11AQ9UI33 1791 aa15.17■□□□□ 0.02
PKM-213ENST00000564993 HMOX1P09601 288 aa15.17■□□□□ 0.02
PKM-213ENST00000564993 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
PKM-213ENST00000564993 GAS2L2Q8NHY3 880 aa15.17■□□□□ 0.02
PKM-213ENST00000564993 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
PKM-213ENST00000564993 ITGB4P16144 1822 aa15.17■□□□□ 0.02
PKM-213ENST00000564993 CYP27B1O15528 508 aa15.16■□□□□ 0.02
PKM-213ENST00000564993 PHKG2P15735 406 aa15.16■□□□□ 0.02
PKM-213ENST00000564993 ADAMTS7Q9UKP4 1686 aa15.16■□□□□ 0.02
PKM-213ENST00000564993 HMGB2P26583 209 aaKnown RBP15.15■□□□□ 0.02
PKM-213ENST00000564993 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
PKM-213ENST00000564993 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
PKM-213ENST00000564993 ZNF530Q6P9A1 599 aaPredicted RBP15.15■□□□□ 0.02
PKM-213ENST00000564993 DCAF5Q96JK2 942 aa15.15■□□□□ 0.02
PKM-213ENST00000564993 BTAF1O14981 1849 aa15.15■□□□□ 0.02
PKM-213ENST00000564993 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
PKM-213ENST00000564993 BAG6P46379 1132 aa15.14■□□□□ 0.01
PKM-213ENST00000564993 FAM182BQ5T319 152 aa15.14■□□□□ 0.01
PKM-213ENST00000564993 TOGARAM1Q9Y4F4 1720 aa15.14■□□□□ 0.01
PKM-213ENST00000564993 ERVV-2B6SEH9 535 aa15.13■□□□□ 0.01
PKM-213ENST00000564993 TRIM37O94972 964 aa15.13■□□□□ 0.01
PKM-213ENST00000564993 PLSCR1O15162 318 aa15.12■□□□□ 0.01
PKM-213ENST00000564993 MAPK8IP3Q9UPT6 1336 aa15.12■□□□□ 0.01
PKM-213ENST00000564993 DLG5Q8TDM6 1919 aa15.11■□□□□ 0.01
PKM-213ENST00000564993 HTATSF1O43719 755 aaKnown RBP15.11■□□□□ 0.01
PKM-213ENST00000564993 MTHFSDQ2M296 383 aaKnown RBP15.11■□□□□ 0.01
PKM-213ENST00000564993 MAP3K5Q99683 1374 aa15.11■□□□□ 0.01
PKM-213ENST00000564993 LY75O60449 1722 aa15.1■□□□□ 0.01
PKM-213ENST00000564993 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
PKM-213ENST00000564993 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
PKM-213ENST00000564993 MRS2Q9HD23 443 aa15.1■□□□□ 0.01
PKM-213ENST00000564993 RREB1Q92766 1687 aa15.09■□□□□ 0.01
PKM-213ENST00000564993 MRC1P22897 1456 aa15.09■□□□□ 0.01
PKM-213ENST00000564993 GNAT3A8MTJ3 354 aa15.09■□□□□ 0.01
PKM-213ENST00000564993 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
PKM-213ENST00000564993 APBA3O96018 575 aa15.09■□□□□ 0.01
PKM-213ENST00000564993 KDM6AO15550 1401 aaPredicted RBP15.09■□□□□ 0.01
PKM-213ENST00000564993 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
PKM-213ENST00000564993 RUNDC1Q96C34 613 aa15.08■□□□□ 0
PKM-213ENST00000564993 TMOD3Q9NYL9 352 aa15.08■□□□□ 0
PKM-213ENST00000564993 ZNF831Q5JPB2 1677 aa15.08■□□□□ 0
PKM-213ENST00000564993 SIPA1L3O60292 1781 aaPredicted RBP15.07■□□□□ 0
PKM-213ENST00000564993 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
PKM-213ENST00000564993 SMARCC1Q92922 1105 aaPredicted RBP15.07■□□□□ 0
PKM-213ENST00000564993 ACSBG1Q96GR2 724 aa15.07■□□□□ 0
PKM-213ENST00000564993 PHACTR3Q96KR7 559 aa15.07■□□□□ 0
PKM-213ENST00000564993 ADAMTS8Q9UP79 889 aa15.07■□□□□ 0
PKM-213ENST00000564993 KCNQ2O43526 872 aa15.06■□□□□ 0
PKM-213ENST00000564993 LMOD3Q0VAK6 560 aa15.06■□□□□ 0
PKM-213ENST00000564993 NFE2L2Q16236 605 aa15.06■□□□□ 0
PKM-213ENST00000564993 RTF1Q92541 710 aaKnown RBP15.06■□□□□ 0
PKM-213ENST00000564993 SYTL4Q96C24 671 aaPredicted RBP15.06■□□□□ 0
PKM-213ENST00000564993 CABP4P57796 275 aa15.05■□□□□ -0
PKM-213ENST00000564993 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ -0
PKM-213ENST00000564993 CEMIPQ8WUJ3 1361 aa15.05■□□□□ -0
PKM-213ENST00000564993 PAPPAQ13219 1627 aa15.04■□□□□ -0
PKM-213ENST00000564993 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
PKM-213ENST00000564993 SLC27A3Q5K4L6 730 aa15.04■□□□□ -0
PKM-213ENST00000564993 MPRIPQ6WCQ1 1025 aa15.04■□□□□ -0
PKM-213ENST00000564993 CAMKK2Q96RR4 588 aa15.04■□□□□ -0
PKM-213ENST00000564993 NUP188Q5SRE5 1749 aa15.03■□□□□ -0
PKM-213ENST00000564993 SLC52A2Q9HAB3 445 aa15.03■□□□□ -0
PKM-213ENST00000564993 CICQ96RK0 1608 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms