RNA–Protein interactions for RNA: ENST00000564908.1

MSRB1-205, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-205ENST00000564908 FAM208AQ9UK61 1670 aaKnown RBP17.67■□□□□ 0.42
MSRB1-205ENST00000564908 SMG6Q86US8 1419 aaKnown RBP17.67■□□□□ 0.42
MSRB1-205ENST00000564908 EYA1Q99502 592 aa17.67■□□□□ 0.42
MSRB1-205ENST00000564908 ANO8Q9HCE9 1232 aaPredicted RBP17.67■□□□□ 0.42
MSRB1-205ENST00000564908 KNSTRNQ9Y448 316 aa17.67■□□□□ 0.42
MSRB1-205ENST00000564908 NUP188Q5SRE5 1749 aa17.66■□□□□ 0.42
MSRB1-205ENST00000564908 MEGF6O75095 1541 aa17.66■□□□□ 0.42
MSRB1-205ENST00000564908 MORC1Q86VD1 984 aa17.65■□□□□ 0.42
MSRB1-205ENST00000564908 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
MSRB1-205ENST00000564908 PER1O15534 1290 aaPredicted RBP17.63■□□□□ 0.41
MSRB1-205ENST00000564908 EIF4A2Q14240 407 aaKnown RBP17.63■□□□□ 0.41
MSRB1-205ENST00000564908 SLC15A2Q16348 729 aa17.63■□□□□ 0.41
MSRB1-205ENST00000564908 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
MSRB1-205ENST00000564908 PDGFDQ9GZP0 370 aaPredicted RBP17.63■□□□□ 0.41
MSRB1-205ENST00000564908 LRRC4BQ9NT99 713 aa17.63■□□□□ 0.41
MSRB1-205ENST00000564908 CYP27B1O15528 508 aa17.62■□□□□ 0.41
MSRB1-205ENST00000564908 STK32BQ9NY57 414 aa17.62■□□□□ 0.41
MSRB1-205ENST00000564908 RGPD3A6NKT7 1758 aaPredicted RBP17.61■□□□□ 0.41
MSRB1-205ENST00000564908 RGPD4Q7Z3J3 1758 aa17.61■□□□□ 0.41
MSRB1-205ENST00000564908 NHSQ6T4R5 1651 aa17.61■□□□□ 0.41
MSRB1-205ENST00000564908 SPON1Q9HCB6 807 aa17.6■□□□□ 0.41
MSRB1-205ENST00000564908 NSD2O96028 1365 aa17.6■□□□□ 0.41
MSRB1-205ENST00000564908 BTAF1O14981 1849 aa17.59■□□□□ 0.41
MSRB1-205ENST00000564908 LRP5O75197 1615 aa17.58■□□□□ 0.41
MSRB1-205ENST00000564908 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 KCNQ4P56696 695 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
MSRB1-205ENST00000564908 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
MSRB1-205ENST00000564908 SPG7Q9UQ90 795 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 SHANK3Q9BYB0 1731 aa17.58■□□□□ 0.4
MSRB1-205ENST00000564908 NCAPD2Q15021 1401 aa17.57■□□□□ 0.4
MSRB1-205ENST00000564908 ANKRD26Q9UPS8 1709 aa17.56■□□□□ 0.4
MSRB1-205ENST00000564908 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
MSRB1-205ENST00000564908 ZBTB7AO95365 584 aa17.55■□□□□ 0.4
MSRB1-205ENST00000564908 AKT1S1Q96B36 256 aa17.55■□□□□ 0.4
MSRB1-205ENST00000564908 ATF5Q9Y2D1 282 aaPredicted RBP17.55■□□□□ 0.4
MSRB1-205ENST00000564908 ZNF827Q17R98 1081 aa17.54■□□□□ 0.4
MSRB1-205ENST00000564908 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
MSRB1-205ENST00000564908 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
MSRB1-205ENST00000564908 MTHFSP49914 203 aa17.53■□□□□ 0.4
MSRB1-205ENST00000564908 IFNL2Q8IZJ0 200 aa17.53■□□□□ 0.4
MSRB1-205ENST00000564908 PHKG2P15735 406 aa17.52■□□□□ 0.4
MSRB1-205ENST00000564908 IL13P35225 146 aa17.52■□□□□ 0.4
MSRB1-205ENST00000564908 PIGBQ92521 554 aa17.52■□□□□ 0.4
MSRB1-205ENST00000564908 CCNL1Q9UK58 526 aaPredicted RBP17.52■□□□□ 0.4
MSRB1-205ENST00000564908 PTGER2P43116 358 aa17.51■□□□□ 0.39
MSRB1-205ENST00000564908 PPP1R1BQ9UD71 204 aaPredicted RBP17.51■□□□□ 0.39
MSRB1-205ENST00000564908 DOT1LQ8TEK3 1739 aa17.5■□□□□ 0.39
MSRB1-205ENST00000564908 CNGB1Q14028 1251 aaPredicted RBP17.5■□□□□ 0.39
MSRB1-205ENST00000564908 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
MSRB1-205ENST00000564908 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
MSRB1-205ENST00000564908 AEBP1Q8IUX7 1158 aa17.5■□□□□ 0.39
MSRB1-205ENST00000564908 MTFR1LQ9H019 292 aa17.49■□□□□ 0.39
MSRB1-205ENST00000564908 TFCP2L1Q9NZI6 479 aa17.49■□□□□ 0.39
MSRB1-205ENST00000564908 SMARCC1Q92922 1105 aaPredicted RBP17.48■□□□□ 0.39
MSRB1-205ENST00000564908 CASZ1Q86V15 1759 aa17.48■□□□□ 0.39
MSRB1-205ENST00000564908 AMOTQ4VCS5 1084 aa17.47■□□□□ 0.39
MSRB1-205ENST00000564908 SGIP1Q9BQI5 828 aa17.47■□□□□ 0.39
MSRB1-205ENST00000564908 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
MSRB1-205ENST00000564908 SLC16A10Q8TF71 515 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 TMOD3Q9NYL9 352 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 ITGB4P16144 1822 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 LY75O60449 1722 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 PAPPAQ13219 1627 aa17.46■□□□□ 0.39
MSRB1-205ENST00000564908 PNPLA7Q6ZV29 1317 aa17.46■□□□□ 0.38
MSRB1-205ENST00000564908 NPC1L1Q9UHC9 1359 aa17.45■□□□□ 0.38
MSRB1-205ENST00000564908 PALLDQ8WX93 1383 aa17.44■□□□□ 0.38
MSRB1-205ENST00000564908 ERVV-2B6SEH9 535 aa17.44■□□□□ 0.38
MSRB1-205ENST00000564908 HSP90AB1P08238 724 aaKnown RBP17.44■□□□□ 0.38
MSRB1-205ENST00000564908 ZNF530Q6P9A1 599 aaPredicted RBP17.44■□□□□ 0.38
MSRB1-205ENST00000564908 DCAF5Q96JK2 942 aa17.44■□□□□ 0.38
MSRB1-205ENST00000564908 ATG3Q9NT62 314 aa17.44■□□□□ 0.38
MSRB1-205ENST00000564908 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
MSRB1-205ENST00000564908 DIAPH1O60610 1272 aaKnown RBP17.43■□□□□ 0.38
MSRB1-205ENST00000564908 HMGB2P26583 209 aaKnown RBP17.43■□□□□ 0.38
MSRB1-205ENST00000564908 COL23A1Q86Y22 540 aaPredicted RBP17.43■□□□□ 0.38
MSRB1-205ENST00000564908 LOC102724428A0A0B4J2F2 783 aa17.42■□□□□ 0.38
MSRB1-205ENST00000564908 HMOX1P09601 288 aa17.42■□□□□ 0.38
MSRB1-205ENST00000564908 SIK1P57059 783 aa17.42■□□□□ 0.38
MSRB1-205ENST00000564908 KDRP35968 1356 aa17.41■□□□□ 0.38
MSRB1-205ENST00000564908 TOGARAM1Q9Y4F4 1720 aa17.41■□□□□ 0.38
MSRB1-205ENST00000564908 ARXQ96QS3 562 aa17.41■□□□□ 0.38
MSRB1-205ENST00000564908 MSH5O43196 834 aa17.4■□□□□ 0.38
MSRB1-205ENST00000564908 C1orf141Q5JVX7 400 aa17.4■□□□□ 0.38
MSRB1-205ENST00000564908 SYT17Q9BSW7 474 aa17.4■□□□□ 0.38
MSRB1-205ENST00000564908 ATP6V1AP38606 617 aa17.39■□□□□ 0.37
MSRB1-205ENST00000564908 CABP4P57796 275 aa17.39■□□□□ 0.37
MSRB1-205ENST00000564908 NFATC2IPQ8NCF5 419 aa17.39■□□□□ 0.37
MSRB1-205ENST00000564908 FHDC1Q9C0D6 1143 aaPredicted RBP17.39■□□□□ 0.37
MSRB1-205ENST00000564908 ITPK1Q13572 414 aa17.38■□□□□ 0.37
MSRB1-205ENST00000564908 SMIM5Q71RC9 77 aa17.38■□□□□ 0.37
MSRB1-205ENST00000564908 AKAP4Q5JQC9 854 aa17.37■□□□□ 0.37
MSRB1-205ENST00000564908 AMIGO3Q86WK7 504 aa17.37■□□□□ 0.37
MSRB1-205ENST00000564908 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
MSRB1-205ENST00000564908 FLAD1Q8NFF5 587 aa17.37■□□□□ 0.37
MSRB1-205ENST00000564908 SLC4A9Q96Q91 983 aa17.37■□□□□ 0.37
MSRB1-205ENST00000564908 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms