RNA–Protein interactions for RNA: ENST00000564834.1

LINC01003-201, Transcript of long intergenic non-protein coding RNA 1003, humanhuman

BASIC

Gene LINC01003, Length 1,764 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01003-201ENST00000564834 CHL1O00533 1208 aa32.37■■■□□ 2.77
LINC01003-201ENST00000564834 VAMP4O75379 141 aa32.37■■■□□ 2.77
LINC01003-201ENST00000564834 BRPF1P55201 1214 aaPredicted RBP32.37■■■□□ 2.77
LINC01003-201ENST00000564834 USHBP1Q8N6Y0 703 aa32.37■■■□□ 2.77
LINC01003-201ENST00000564834 COG6Q9Y2V7 657 aa32.37■■■□□ 2.77
LINC01003-201ENST00000564834 AAMPQ13685 434 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 ABCC6O95255 1503 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 GNAT3A8MTJ3 354 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 RLBP1P12271 317 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 TSPYL6Q8N831 410 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 ANKRD24Q8TF21 1146 aa32.35■■■□□ 2.77
LINC01003-201ENST00000564834 MAP3K5Q99683 1374 aa32.34■■■□□ 2.77
LINC01003-201ENST00000564834 TWISTNBQ3B726 338 aaPredicted RBP32.34■■■□□ 2.77
LINC01003-201ENST00000564834 COL18A1P39060 1754 aa32.34■■■□□ 2.77
LINC01003-201ENST00000564834 ZC3H6P61129 1189 aaKnown RBP32.32■■■□□ 2.77
LINC01003-201ENST00000564834 DZIP1LQ8IYY4 767 aaKnown RBP32.32■■■□□ 2.77
LINC01003-201ENST00000564834 LRRC59Q96AG4 307 aaKnown RBP32.32■■■□□ 2.77
LINC01003-201ENST00000564834 TNNQ9UQP3 1299 aa32.32■■■□□ 2.77
LINC01003-201ENST00000564834 AXIN2Q9Y2T1 843 aa32.32■■■□□ 2.77
LINC01003-201ENST00000564834 ATF7IPQ6VMQ6 1270 aa32.32■■■□□ 2.76
LINC01003-201ENST00000564834 SOS2Q07890 1332 aaPredicted RBP32.31■■■□□ 2.76
LINC01003-201ENST00000564834 KIAA0232Q92628 1395 aa32.31■■■□□ 2.76
LINC01003-201ENST00000564834 IPO8O15397 1037 aaKnown RBP32.31■■■□□ 2.76
LINC01003-201ENST00000564834 FTSJ3Q8IY81 847 aaKnown RBP32.31■■■□□ 2.76
LINC01003-201ENST00000564834 C8orf58Q8NAV2 365 aa32.31■■■□□ 2.76
LINC01003-201ENST00000564834 KDM2BQ8NHM5 1336 aa32.31■■■□□ 2.76
LINC01003-201ENST00000564834 LMO7Q8WWI1 1683 aa32.3■■■□□ 2.76
LINC01003-201ENST00000564834 TRIM27P14373 513 aa32.3■■■□□ 2.76
LINC01003-201ENST00000564834 NOB1Q9ULX3 412 aaKnown RBP32.3■■■□□ 2.76
LINC01003-201ENST00000564834 CLUAP1Q96AJ1 413 aa32.3■■■□□ 2.76
LINC01003-201ENST00000564834 ERBB3P21860 1342 aa32.29■■■□□ 2.76
LINC01003-201ENST00000564834 HAP1P54257 671 aaPredicted RBP32.29■■■□□ 2.76
LINC01003-201ENST00000564834 CENPQQ7L2Z9 268 aaPredicted RBP32.28■■■□□ 2.76
LINC01003-201ENST00000564834 NHSL1Q5SYE7 1610 aa32.28■■■□□ 2.76
LINC01003-201ENST00000564834 MVPQ14764 893 aaKnown RBP32.27■■■□□ 2.76
LINC01003-201ENST00000564834 FAM208AQ9UK61 1670 aaKnown RBP32.27■■■□□ 2.76
LINC01003-201ENST00000564834 CPDO75976 1380 aa32.26■■■□□ 2.76
LINC01003-201ENST00000564834 ELL2O00472 640 aaPredicted RBP32.26■■■□□ 2.75
LINC01003-201ENST00000564834 MRPL50Q8N5N7 158 aaKnown RBP32.25■■■□□ 2.75
LINC01003-201ENST00000564834 CABLES1Q8TDN4 633 aa32.25■■■□□ 2.75
LINC01003-201ENST00000564834 TSPYL4Q9UJ04 414 aa32.23■■■□□ 2.75
LINC01003-201ENST00000564834 AMOTQ4VCS5 1084 aa32.22■■■□□ 2.75
LINC01003-201ENST00000564834 ARHGAP45Q92619 1136 aa32.22■■■□□ 2.75
LINC01003-201ENST00000564834 PLEKHO1Q53GL0 409 aaPredicted RBP32.22■■■□□ 2.75
LINC01003-201ENST00000564834 IL17REQ8NFR9 667 aa32.22■■■□□ 2.75
LINC01003-201ENST00000564834 BABAM1Q9NWV8 329 aa32.2■■■□□ 2.75
LINC01003-201ENST00000564834 VIRMAQ69YN4 1812 aaKnown RBP32.2■■■□□ 2.74
LINC01003-201ENST00000564834 CEMIPQ8WUJ3 1361 aa32.19■■■□□ 2.74
LINC01003-201ENST00000564834 ABCA3Q99758 1704 aa32.19■■■□□ 2.74
LINC01003-201ENST00000564834 DDX19BQ9UMR2 479 aa32.18■■■□□ 2.74
LINC01003-201ENST00000564834 MIS18AQ9NYP9 233 aa32.17■■■□□ 2.74
LINC01003-201ENST00000564834 KRT24Q2M2I5 525 aa32.17■■■□□ 2.74
LINC01003-201ENST00000564834 AKAP4Q5JQC9 854 aa32.17■■■□□ 2.74
LINC01003-201ENST00000564834 ZNF530Q6P9A1 599 aaPredicted RBP32.15■■■□□ 2.74
LINC01003-201ENST00000564834 TAF7Q15545 349 aaPredicted RBP32.14■■■□□ 2.74
LINC01003-201ENST00000564834 ITPRIPQ8IWB1 547 aa32.14■■■□□ 2.74
LINC01003-201ENST00000564834 TMEM57Q8N5G2 664 aa32.14■■■□□ 2.74
LINC01003-201ENST00000564834 CHRNA2Q15822 529 aa32.13■■■□□ 2.73
LINC01003-201ENST00000564834 PLEKHG2Q9H7P9 1386 aa32.12■■■□□ 2.73
LINC01003-201ENST00000564834 OVOS2A0A0G2JMS6 1433 aa32.12■■■□□ 2.73
LINC01003-201ENST00000564834 TCERG1O14776 1098 aaKnown RBP32.12■■■□□ 2.73
LINC01003-201ENST00000564834 NLRP2Q9NX02 1062 aa32.12■■■□□ 2.73
LINC01003-201ENST00000564834 LTBP4Q8N2S1 1624 aa32.1■■■□□ 2.73
LINC01003-201ENST00000564834 C1orf141Q5JVX7 400 aa32.1■■■□□ 2.73
LINC01003-201ENST00000564834 API5Q9BZZ5 524 aaKnown RBP32.09■■■□□ 2.73
LINC01003-201ENST00000564834 CACNA1FO60840 1977 aa32.09■■■□□ 2.73
LINC01003-201ENST00000564834 KDM3BQ7LBC6 1761 aa32.09■■■□□ 2.73
LINC01003-201ENST00000564834 SOS1Q07889 1333 aaPredicted RBP32.09■■■□□ 2.73
LINC01003-201ENST00000564834 IGHDP01880 384 aa32.09■■■□□ 2.73
LINC01003-201ENST00000564834 RBM19Q9Y4C8 960 aaKnown RBP32.09■■■□□ 2.73
LINC01003-201ENST00000564834 PCDHB15Q9Y5E8 787 aa32.09■■■□□ 2.73
LINC01003-201ENST00000564834 ABCC4O15439 1325 aa32.09■■■□□ 2.73
LINC01003-201ENST00000564834 CSB-PGBD3P0DP91 1061 aa32.08■■■□□ 2.73
LINC01003-201ENST00000564834 RAPGEF4Q8WZA2 1011 aa32.08■■■□□ 2.73
LINC01003-201ENST00000564834 ADAMTS7Q9UKP4 1686 aa32.07■■■□□ 2.73
LINC01003-201ENST00000564834 LGR6Q9HBX8 967 aa32.07■■■□□ 2.72
LINC01003-201ENST00000564834 PRDM11Q9NQV5 511 aa32.06■■■□□ 2.72
LINC01003-201ENST00000564834 ROBO1Q9Y6N7 1651 aa32.06■■■□□ 2.72
LINC01003-201ENST00000564834 RNMTO43148 476 aaKnown RBP32.03■■■□□ 2.72
LINC01003-201ENST00000564834 TATP17735 454 aaPredicted RBP32.03■■■□□ 2.72
LINC01003-201ENST00000564834 CHMP4BQ9H444 224 aaKnown RBP32.03■■■□□ 2.72
LINC01003-201ENST00000564834 ZBTB40Q9NUA8 1239 aa32.03■■■□□ 2.72
LINC01003-201ENST00000564834 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.03■■■□□ 2.72
LINC01003-201ENST00000564834 MEGF6O75095 1541 aa32.03■■■□□ 2.72
LINC01003-201ENST00000564834 PTPRCP08575 1304 aa32.02■■■□□ 2.72
LINC01003-201ENST00000564834 SIPA1L3O60292 1781 aaPredicted RBP32.02■■■□□ 2.72
LINC01003-201ENST00000564834 PKD1L3Q7Z443 1732 aa32.02■■■□□ 2.72
LINC01003-201ENST00000564834 TEFQ10587 303 aa32.02■■■□□ 2.72
LINC01003-201ENST00000564834 MPRIPQ6WCQ1 1025 aa32.02■■■□□ 2.72
LINC01003-201ENST00000564834 AHDC1Q5TGY3 1603 aaPredicted RBP32.01■■■□□ 2.72
LINC01003-201ENST00000564834 RWDD1Q9H446 243 aaPredicted RBP32.01■■■□□ 2.71
LINC01003-201ENST00000564834 SCN11AQ9UI33 1791 aa32■■■□□ 2.71
LINC01003-201ENST00000564834 RGS12O14924 1447 aa31.99■■■□□ 2.71
LINC01003-201ENST00000564834 COL5A2P05997 1499 aaPredicted RBP31.98■■■□□ 2.71
LINC01003-201ENST00000564834 WDR17Q8IZU2 1322 aa31.98■■■□□ 2.71
LINC01003-201ENST00000564834 SLC4A2P04920 1241 aa31.98■■■□□ 2.71
LINC01003-201ENST00000564834 SPG7Q9UQ90 795 aa31.98■■■□□ 2.71
LINC01003-201ENST00000564834 CCDC30Q5VVM6 783 aa31.96■■■□□ 2.71
LINC01003-201ENST00000564834 SKAP1Q86WV1 359 aa31.96■■■□□ 2.71
LINC01003-201ENST00000564834 STK31Q9BXU1 1019 aa31.96■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms