RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 RRS1Q15050 365 aaKnown RBP22.36■■□□□ 1.17
CDH11-210ENST00000564770 TOGARAM1Q9Y4F4 1720 aa22.36■■□□□ 1.17
CDH11-210ENST00000564770 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
CDH11-210ENST00000564770 GGNBP2Q9H3C7 697 aa22.35■■□□□ 1.17
CDH11-210ENST00000564770 FYB1O15117 783 aa22.34■■□□□ 1.17
CDH11-210ENST00000564770 AKT1S1Q96B36 256 aa22.34■■□□□ 1.17
CDH11-210ENST00000564770 C5P01031 1676 aa22.33■■□□□ 1.17
CDH11-210ENST00000564770 DCAF8L1A6NGE4 600 aa22.33■■□□□ 1.17
CDH11-210ENST00000564770 PKD1L3Q7Z443 1732 aa22.33■■□□□ 1.17
CDH11-210ENST00000564770 TAF1LQ8IZX4 1826 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 KCNQ4P56696 695 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 TMF1P82094 1093 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 NBPF6Q5VWK0 638 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 USHBP1Q8N6Y0 703 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 NBPF4Q96M43 638 aa22.32■■□□□ 1.16
CDH11-210ENST00000564770 MAP3K5Q99683 1374 aa22.31■■□□□ 1.16
CDH11-210ENST00000564770 SLC24A1O60721 1099 aa22.31■■□□□ 1.16
CDH11-210ENST00000564770 SYTL4Q96C24 671 aaPredicted RBP22.31■■□□□ 1.16
CDH11-210ENST00000564770 ITGB4P16144 1822 aa22.31■■□□□ 1.16
CDH11-210ENST00000564770 SMG6Q86US8 1419 aaKnown RBP22.31■■□□□ 1.16
CDH11-210ENST00000564770 PNPLA7Q6ZV29 1317 aa22.31■■□□□ 1.16
CDH11-210ENST00000564770 PRIM1P49642 420 aaKnown RBP22.3■■□□□ 1.16
CDH11-210ENST00000564770 SLC27A3Q5K4L6 730 aa22.3■■□□□ 1.16
CDH11-210ENST00000564770 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
CDH11-210ENST00000564770 ARXQ96QS3 562 aa22.29■■□□□ 1.16
CDH11-210ENST00000564770 INSRP06213 1382 aa22.27■■□□□ 1.16
CDH11-210ENST00000564770 FLT4P35916 1363 aa22.27■■□□□ 1.16
CDH11-210ENST00000564770 NSD3Q9BZ95 1437 aa22.26■■□□□ 1.15
CDH11-210ENST00000564770 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
CDH11-210ENST00000564770 HSP90AB2PQ58FF8 381 aa22.26■■□□□ 1.15
CDH11-210ENST00000564770 MAP2P11137 1827 aaKnown RBP22.25■■□□□ 1.15
CDH11-210ENST00000564770 KIF24Q5T7B8 1368 aa22.24■■□□□ 1.15
CDH11-210ENST00000564770 NCAPD2Q15021 1401 aa22.23■■□□□ 1.15
CDH11-210ENST00000564770 CARD14Q9BXL6 1004 aa22.23■■□□□ 1.15
CDH11-210ENST00000564770 CGNL1Q0VF96 1302 aa22.23■■□□□ 1.15
CDH11-210ENST00000564770 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
CDH11-210ENST00000564770 RAPGEF4Q8WZA2 1011 aa22.22■■□□□ 1.15
CDH11-210ENST00000564770 TFCP2L1Q9NZI6 479 aa22.21■■□□□ 1.15
CDH11-210ENST00000564770 CCNL1Q9UK58 526 aaPredicted RBP22.21■■□□□ 1.15
CDH11-210ENST00000564770 EMILIN1Q9Y6C2 1016 aa22.21■■□□□ 1.15
CDH11-210ENST00000564770 C4BP0C0L5 1744 aa22.2■■□□□ 1.14
CDH11-210ENST00000564770 PCDH11XQ9BZA7 1347 aa22.2■■□□□ 1.14
CDH11-210ENST00000564770 PCDH11YQ9BZA8 1340 aa22.2■■□□□ 1.14
CDH11-210ENST00000564770 UBR3Q6ZT12 1888 aa22.2■■□□□ 1.14
CDH11-210ENST00000564770 TATP17735 454 aaPredicted RBP22.19■■□□□ 1.14
CDH11-210ENST00000564770 CDCA8Q53HL2 280 aa22.19■■□□□ 1.14
CDH11-210ENST00000564770 ZNF784Q8NCA9 323 aaPredicted RBP22.19■■□□□ 1.14
CDH11-210ENST00000564770 KLHL34Q8N239 644 aa22.18■■□□□ 1.14
CDH11-210ENST00000564770 CYP27B1O15528 508 aa22.17■■□□□ 1.14
CDH11-210ENST00000564770 POLD1P28340 1107 aa22.16■■□□□ 1.14
CDH11-210ENST00000564770 PALLDQ8WX93 1383 aa22.15■■□□□ 1.14
CDH11-210ENST00000564770 NLGN2Q8NFZ4 835 aa22.15■■□□□ 1.14
CDH11-210ENST00000564770 COL23A1Q86Y22 540 aaPredicted RBP22.14■■□□□ 1.13
CDH11-210ENST00000564770 MPRIPQ6WCQ1 1025 aa22.11■■□□□ 1.13
CDH11-210ENST00000564770 GPR162Q16538 588 aa22.1■■□□□ 1.13
CDH11-210ENST00000564770 MSL1Q68DK7 614 aa22.1■■□□□ 1.13
CDH11-210ENST00000564770 PPM1GO15355 546 aaPredicted RBP22.09■■□□□ 1.13
CDH11-210ENST00000564770 AMIGO3Q86WK7 504 aa22.09■■□□□ 1.13
CDH11-210ENST00000564770 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.13
CDH11-210ENST00000564770 MSH5O43196 834 aa22.08■■□□□ 1.13
CDH11-210ENST00000564770 PELP1Q8IZL8 1130 aaKnown RBP22.07■■□□□ 1.12
CDH11-210ENST00000564770 EYA1Q99502 592 aa22.06■■□□□ 1.12
CDH11-210ENST00000564770 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
CDH11-210ENST00000564770 YBX3P16989 372 aaKnown RBP eCLIP22.05■■□□□ 1.12
CDH11-210ENST00000564770 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
CDH11-210ENST00000564770 POLKQ9UBT6 870 aa22.05■■□□□ 1.12
CDH11-210ENST00000564770 PIGBQ92521 554 aa22.04■■□□□ 1.12
CDH11-210ENST00000564770 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
CDH11-210ENST00000564770 COL5A3P25940 1745 aaPredicted RBP22.03■■□□□ 1.12
CDH11-210ENST00000564770 SMIM5Q71RC9 77 aa22.02■■□□□ 1.12
CDH11-210ENST00000564770 POLR3GLQ9BT43 218 aa22.02■■□□□ 1.12
CDH11-210ENST00000564770 CEP350Q5VT06 3117 aa22.02■■□□□ 1.12
CDH11-210ENST00000564770 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
CDH11-210ENST00000564770 SPG7Q9UQ90 795 aa22.01■■□□□ 1.11
CDH11-210ENST00000564770 ZNF831Q5JPB2 1677 aa22.01■■□□□ 1.11
CDH11-210ENST00000564770 EIF4A2Q14240 407 aaKnown RBP22■■□□□ 1.11
CDH11-210ENST00000564770 LINC00116Q8NCU8 138 aa22■■□□□ 1.11
CDH11-210ENST00000564770 KIAA1551Q9HCM1 1747 aa22■■□□□ 1.11
CDH11-210ENST00000564770 PHKG2P15735 406 aa21.99■■□□□ 1.11
CDH11-210ENST00000564770 TNNT2P45379 298 aaPredicted RBP21.99■■□□□ 1.11
CDH11-210ENST00000564770 FLAD1Q8NFF5 587 aa21.99■■□□□ 1.11
CDH11-210ENST00000564770 AK7Q96M32 723 aa21.99■■□□□ 1.11
CDH11-210ENST00000564770 PCGF6Q9BYE7 350 aa21.99■■□□□ 1.11
CDH11-210ENST00000564770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.99■■□□□ 1.11
CDH11-210ENST00000564770 LOC102724428A0A0B4J2F2 783 aa21.98■■□□□ 1.11
CDH11-210ENST00000564770 PHF14O94880 888 aa21.98■■□□□ 1.11
CDH11-210ENST00000564770 SIK1P57059 783 aa21.98■■□□□ 1.11
CDH11-210ENST00000564770 KDRP35968 1356 aa21.98■■□□□ 1.11
CDH11-210ENST00000564770 PLEKHG2Q9H7P9 1386 aa21.98■■□□□ 1.11
CDH11-210ENST00000564770 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.97■■□□□ 1.11
CDH11-210ENST00000564770 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
CDH11-210ENST00000564770 ASAP1Q9ULH1 1129 aa21.97■■□□□ 1.11
CDH11-210ENST00000564770 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
CDH11-210ENST00000564770 C4AP0C0L4 1744 aa21.97■■□□□ 1.11
CDH11-210ENST00000564770 KIF13BQ9NQT8 1826 aa21.96■■□□□ 1.11
CDH11-210ENST00000564770 ITPK1Q13572 414 aa21.96■■□□□ 1.11
CDH11-210ENST00000564770 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
CDH11-210ENST00000564770 HSPA5P11021 654 aaKnown RBP21.95■■□□□ 1.1
CDH11-210ENST00000564770 C1QTNF8P60827 252 aa21.95■■□□□ 1.1
CDH11-210ENST00000564770 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms