RNA–Protein interactions for RNA: ENST00000564685.5

VAC14-206, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 892 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-206ENST00000564685 A0A1W2PP64 1363 aa20.65■□□□□ 0.9
VAC14-206ENST00000564685 ANKRD36BQ8N2N9 1353 aa20.65■□□□□ 0.9
VAC14-206ENST00000564685 ZCRB1Q8TBF4 217 aaKnown RBP20.63■□□□□ 0.89
VAC14-206ENST00000564685 LY75O60449 1722 aa20.63■□□□□ 0.89
VAC14-206ENST00000564685 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
VAC14-206ENST00000564685 MSH5O43196 834 aa20.62■□□□□ 0.89
VAC14-206ENST00000564685 GRIN3BO60391 1043 aa20.62■□□□□ 0.89
VAC14-206ENST00000564685 CCNL1Q9UK58 526 aaPredicted RBP20.62■□□□□ 0.89
VAC14-206ENST00000564685 NSD2O96028 1365 aa20.61■□□□□ 0.89
VAC14-206ENST00000564685 AMPHP49418 695 aa20.61■□□□□ 0.89
VAC14-206ENST00000564685 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
VAC14-206ENST00000564685 CEP350Q5VT06 3117 aa20.61■□□□□ 0.89
VAC14-206ENST00000564685 MAP3K19Q56UN5 1328 aa20.6■□□□□ 0.89
VAC14-206ENST00000564685 YBX3P16989 372 aaKnown RBP eCLIP20.6■□□□□ 0.891e-6■■□□□ 11.7
VAC14-206ENST00000564685 HOXC9P31274 260 aa20.6■□□□□ 0.89
VAC14-206ENST00000564685 COG3Q96JB2 828 aa20.6■□□□□ 0.89
VAC14-206ENST00000564685 SHANK3Q9BYB0 1731 aa20.59■□□□□ 0.89
VAC14-206ENST00000564685 COL23A1Q86Y22 540 aaPredicted RBP20.59■□□□□ 0.89
VAC14-206ENST00000564685 FBLN1P23142 703 aa20.58■□□□□ 0.89
VAC14-206ENST00000564685 RGPD2P0DJD1 1756 aa20.58■□□□□ 0.89
VAC14-206ENST00000564685 USP47Q96K76 1375 aa20.58■□□□□ 0.88
VAC14-206ENST00000564685 MEGF6O75095 1541 aa20.57■□□□□ 0.88
VAC14-206ENST00000564685 MSL1Q68DK7 614 aa20.56■□□□□ 0.88
VAC14-206ENST00000564685 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
VAC14-206ENST00000564685 IFFO2Q5TF58 517 aa20.53■□□□□ 0.88
VAC14-206ENST00000564685 NBPF6Q5VWK0 638 aa20.53■□□□□ 0.88
VAC14-206ENST00000564685 NBPF4Q96M43 638 aa20.53■□□□□ 0.88
VAC14-206ENST00000564685 RAPGEF4Q8WZA2 1011 aa20.52■□□□□ 0.88
VAC14-206ENST00000564685 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.88
VAC14-206ENST00000564685 HMGB2P26583 209 aaKnown RBP20.51■□□□□ 0.87
VAC14-206ENST00000564685 USHBP1Q8N6Y0 703 aa20.51■□□□□ 0.87
VAC14-206ENST00000564685 ATP10DQ9P241 1426 aa20.51■□□□□ 0.87
VAC14-206ENST00000564685 RTL1A6NKG5 1358 aa20.5■□□□□ 0.87
VAC14-206ENST00000564685 RRS1Q15050 365 aaKnown RBP20.5■□□□□ 0.87
VAC14-206ENST00000564685 FLAD1Q8NFF5 587 aa20.5■□□□□ 0.87
VAC14-206ENST00000564685 TESK2Q96S53 571 aa20.5■□□□□ 0.87
VAC14-206ENST00000564685 C5P01031 1676 aa20.49■□□□□ 0.87
VAC14-206ENST00000564685 SMG6Q86US8 1419 aaKnown RBP20.48■□□□□ 0.87
VAC14-206ENST00000564685 ST20-MTHFSA0A0A6YYL1 179 aa20.48■□□□□ 0.87
VAC14-206ENST00000564685 TATP17735 454 aaPredicted RBP20.48■□□□□ 0.87
VAC14-206ENST00000564685 GPBP1L1Q9HC44 474 aaPredicted RBP20.48■□□□□ 0.87
VAC14-206ENST00000564685 TONSLQ96HA7 1378 aa20.47■□□□□ 0.87
VAC14-206ENST00000564685 SLC24A1O60721 1099 aa20.47■□□□□ 0.87
VAC14-206ENST00000564685 PALLDQ8WX93 1383 aa20.46■□□□□ 0.87
VAC14-206ENST00000564685 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
VAC14-206ENST00000564685 PCDH11XQ9BZA7 1347 aa20.46■□□□□ 0.87
VAC14-206ENST00000564685 PCDH11YQ9BZA8 1340 aa20.46■□□□□ 0.87
VAC14-206ENST00000564685 TAF1LQ8IZX4 1826 aa20.46■□□□□ 0.87
VAC14-206ENST00000564685 FYB1O15117 783 aa20.45■□□□□ 0.86
VAC14-206ENST00000564685 GGNBP2Q9H3C7 697 aa20.45■□□□□ 0.86
VAC14-206ENST00000564685 HSP90AB2PQ58FF8 381 aa20.43■□□□□ 0.86
VAC14-206ENST00000564685 ZNF526Q8TF50 670 aaPredicted RBP20.43■□□□□ 0.86
VAC14-206ENST00000564685 SMARCC1Q92922 1105 aaPredicted RBP20.43■□□□□ 0.86
VAC14-206ENST00000564685 AK7Q96M32 723 aa20.43■□□□□ 0.86
VAC14-206ENST00000564685 INSRP06213 1382 aa20.42■□□□□ 0.86
VAC14-206ENST00000564685 CYP27B1O15528 508 aa20.41■□□□□ 0.86
VAC14-206ENST00000564685 ADCY9O60503 1353 aa20.41■□□□□ 0.86
VAC14-206ENST00000564685 C4BP0C0L5 1744 aa20.4■□□□□ 0.86
VAC14-206ENST00000564685 ITGB4P16144 1822 aa20.39■□□□□ 0.86
VAC14-206ENST00000564685 FLT4P35916 1363 aa20.39■□□□□ 0.85
VAC14-206ENST00000564685 IGSF1Q8N6C5 1336 aa20.39■□□□□ 0.85
VAC14-206ENST00000564685 PHF14O94880 888 aa20.39■□□□□ 0.85
VAC14-206ENST00000564685 HSPA6P17066 643 aa20.39■□□□□ 0.85
VAC14-206ENST00000564685 AMIGO3Q86WK7 504 aa20.39■□□□□ 0.85
VAC14-206ENST00000564685 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.38■□□□□ 0.85
VAC14-206ENST00000564685 WWC3Q9ULE0 1092 aa20.38■□□□□ 0.85
VAC14-206ENST00000564685 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
VAC14-206ENST00000564685 UBR3Q6ZT12 1888 aa20.37■□□□□ 0.85
VAC14-206ENST00000564685 SMIM5Q71RC9 77 aa20.37■□□□□ 0.85
VAC14-206ENST00000564685 PIGBQ92521 554 aa20.37■□□□□ 0.85
VAC14-206ENST00000564685 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
VAC14-206ENST00000564685 KIF24Q5T7B8 1368 aa20.36■□□□□ 0.85
VAC14-206ENST00000564685 SSFA2P28290 1259 aa20.35■□□□□ 0.85
VAC14-206ENST00000564685 TMF1P82094 1093 aa20.35■□□□□ 0.85
VAC14-206ENST00000564685 KIF20BQ96Q89 1820 aa20.34■□□□□ 0.85
VAC14-206ENST00000564685 LOC102724428A0A0B4J2F2 783 aa20.33■□□□□ 0.85
VAC14-206ENST00000564685 SIK1P57059 783 aa20.33■□□□□ 0.85
VAC14-206ENST00000564685 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
VAC14-206ENST00000564685 LINC00116Q8NCU8 138 aa20.33■□□□□ 0.85
VAC14-206ENST00000564685 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
VAC14-206ENST00000564685 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
VAC14-206ENST00000564685 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
VAC14-206ENST00000564685 MAP2P11137 1827 aaKnown RBP20.31■□□□□ 0.84
VAC14-206ENST00000564685 GNPATO15228 680 aa20.3■□□□□ 0.84
VAC14-206ENST00000564685 PPM1GO15355 546 aaPredicted RBP20.3■□□□□ 0.84
VAC14-206ENST00000564685 TMOD3Q9NYL9 352 aa20.3■□□□□ 0.84
VAC14-206ENST00000564685 KIF3CO14782 793 aa20.29■□□□□ 0.84
VAC14-206ENST00000564685 CDCA8Q53HL2 280 aa20.29■□□□□ 0.84
VAC14-206ENST00000564685 ASAP1Q9ULH1 1129 aa20.29■□□□□ 0.84
VAC14-206ENST00000564685 ATP6V1AP38606 617 aa20.28■□□□□ 0.84
VAC14-206ENST00000564685 ITPK1Q13572 414 aa20.28■□□□□ 0.84
VAC14-206ENST00000564685 NCAPD2Q15021 1401 aa20.27■□□□□ 0.84
VAC14-206ENST00000564685 MMP10P09238 476 aa20.27■□□□□ 0.84
VAC14-206ENST00000564685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.84
VAC14-206ENST00000564685 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
VAC14-206ENST00000564685 EYA1Q99502 592 aa20.25■□□□□ 0.83
VAC14-206ENST00000564685 IFNL2Q8IZJ0 200 aa20.24■□□□□ 0.83
VAC14-206ENST00000564685 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
VAC14-206ENST00000564685 CICQ96RK0 1608 aaPredicted RBP20.24■□□□□ 0.83
VAC14-206ENST00000564685 PHKG2P15735 406 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms