RNA–Protein interactions for RNA: ENST00000564662.1

COTL1-204, Transcript of coactosin like F-actin binding protein 1, humanhuman

TSL 2

Gene COTL1, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-204ENST00000564662 LRRC4BQ9NT99 713 aa28.04■■■□□ 2.08
COTL1-204ENST00000564662 USHBP1Q8N6Y0 703 aa28.01■■■□□ 2.07
COTL1-204ENST00000564662 NSD2O96028 1365 aa28■■■□□ 2.07
COTL1-204ENST00000564662 CDCA8Q53HL2 280 aa28■■■□□ 2.07
COTL1-204ENST00000564662 ZCRB1Q8TBF4 217 aaKnown RBP28■■■□□ 2.07
COTL1-204ENST00000564662 ANKRD26Q9UPS8 1709 aa28■■■□□ 2.07
COTL1-204ENST00000564662 NBPF6Q5VWK0 638 aa27.99■■■□□ 2.07
COTL1-204ENST00000564662 NBPF4Q96M43 638 aa27.99■■■□□ 2.07
COTL1-204ENST00000564662 FHDC1Q9C0D6 1143 aaPredicted RBP27.99■■■□□ 2.07
COTL1-204ENST00000564662 PRIM1P49642 420 aaKnown RBP27.98■■■□□ 2.07
COTL1-204ENST00000564662 NSD3Q9BZ95 1437 aa27.98■■■□□ 2.07
COTL1-204ENST00000564662 SLC27A3Q5K4L6 730 aa27.97■■■□□ 2.07
COTL1-204ENST00000564662 SGIP1Q9BQI5 828 aa27.97■■■□□ 2.07
COTL1-204ENST00000564662 COL24A1Q17RW2 1714 aa27.97■■■□□ 2.07
COTL1-204ENST00000564662 FLT4P35916 1363 aa27.97■■■□□ 2.07
COTL1-204ENST00000564662 INSRP06213 1382 aa27.96■■■□□ 2.07
COTL1-204ENST00000564662 KCNQ4P56696 695 aa27.95■■■□□ 2.06
COTL1-204ENST00000564662 PKD1L3Q7Z443 1732 aa27.95■■■□□ 2.06
COTL1-204ENST00000564662 C5P01031 1676 aa27.94■■■□□ 2.06
COTL1-204ENST00000564662 RAPGEF4Q8WZA2 1011 aa27.94■■■□□ 2.06
COTL1-204ENST00000564662 AKT1S1Q96B36 256 aa27.94■■■□□ 2.06
COTL1-204ENST00000564662 TOGARAM1Q9Y4F4 1720 aa27.94■■■□□ 2.06
COTL1-204ENST00000564662 HSP90AB2PQ58FF8 381 aa27.93■■■□□ 2.06
COTL1-204ENST00000564662 SYT17Q9BSW7 474 aa27.93■■■□□ 2.06
COTL1-204ENST00000564662 MAP2P11137 1827 aaKnown RBP27.92■■■□□ 2.06
COTL1-204ENST00000564662 ITGB4P16144 1822 aa27.92■■■□□ 2.06
COTL1-204ENST00000564662 KIF24Q5T7B8 1368 aa27.92■■■□□ 2.06
COTL1-204ENST00000564662 ARXQ96QS3 562 aa27.92■■■□□ 2.06
COTL1-204ENST00000564662 CHD4Q14839 1912 aa27.92■■■□□ 2.06
COTL1-204ENST00000564662 CGNL1Q0VF96 1302 aa27.92■■■□□ 2.06
COTL1-204ENST00000564662 TATP17735 454 aaPredicted RBP27.91■■■□□ 2.06
COTL1-204ENST00000564662 CARD14Q9BXL6 1004 aa27.91■■■□□ 2.06
COTL1-204ENST00000564662 PNPLA7Q6ZV29 1317 aa27.91■■■□□ 2.06
COTL1-204ENST00000564662 TAF1LQ8IZX4 1826 aa27.9■■■□□ 2.06
COTL1-204ENST00000564662 EMILIN1Q9Y6C2 1016 aa27.89■■■□□ 2.06
COTL1-204ENST00000564662 PCDH11XQ9BZA7 1347 aa27.89■■■□□ 2.05
COTL1-204ENST00000564662 PCDH11YQ9BZA8 1340 aa27.89■■■□□ 2.05
COTL1-204ENST00000564662 TFCP2L1Q9NZI6 479 aa27.88■■■□□ 2.05
COTL1-204ENST00000564662 CCNL1Q9UK58 526 aaPredicted RBP27.88■■■□□ 2.05
COTL1-204ENST00000564662 MAP3K5Q99683 1374 aa27.86■■■□□ 2.05
COTL1-204ENST00000564662 TIMELESSQ9UNS1 1208 aa27.85■■■□□ 2.05
COTL1-204ENST00000564662 KLHL34Q8N239 644 aa27.84■■■□□ 2.05
COTL1-204ENST00000564662 SLC16A10Q8TF71 515 aa27.84■■■□□ 2.05
COTL1-204ENST00000564662 PCGF6Q9BYE7 350 aa27.84■■■□□ 2.05
COTL1-204ENST00000564662 PPM1GO15355 546 aaPredicted RBP27.83■■■□□ 2.05
COTL1-204ENST00000564662 POLR3GLQ9BT43 218 aa27.82■■■□□ 2.04
COTL1-204ENST00000564662 CLSPNQ9HAW4 1339 aa27.82■■■□□ 2.04
COTL1-204ENST00000564662 NCAPD2Q15021 1401 aa27.82■■■□□ 2.04
COTL1-204ENST00000564662 POLD1P28340 1107 aa27.81■■■□□ 2.04
COTL1-204ENST00000564662 PALLDQ8WX93 1383 aa27.79■■■□□ 2.04
COTL1-204ENST00000564662 CYP27B1O15528 508 aa27.79■■■□□ 2.04
COTL1-204ENST00000564662 C4BP0C0L5 1744 aa27.78■■■□□ 2.04
COTL1-204ENST00000564662 MSH5O43196 834 aa27.77■■■□□ 2.04
COTL1-204ENST00000564662 MPRIPQ6WCQ1 1025 aa27.76■■■□□ 2.03
COTL1-204ENST00000564662 UBR3Q6ZT12 1888 aa27.74■■■□□ 2.03
COTL1-204ENST00000564662 WASHC2AQ641Q2 1341 aa27.73■■■□□ 2.03
COTL1-204ENST00000564662 COL23A1Q86Y22 540 aaPredicted RBP27.72■■■□□ 2.03
COTL1-204ENST00000564662 GPR162Q16538 588 aa27.71■■■□□ 2.03
COTL1-204ENST00000564662 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
COTL1-204ENST00000564662 MSL1Q68DK7 614 aa27.7■■■□□ 2.02
COTL1-204ENST00000564662 PELP1Q8IZL8 1130 aaKnown RBP27.7■■■□□ 2.02
COTL1-204ENST00000564662 ZNF784Q8NCA9 323 aaPredicted RBP27.7■■■□□ 2.02
COTL1-204ENST00000564662 SPG7Q9UQ90 795 aa27.7■■■□□ 2.02
COTL1-204ENST00000564662 NLGN2Q8NFZ4 835 aa27.69■■■□□ 2.02
COTL1-204ENST00000564662 EYA1Q99502 592 aa27.69■■■□□ 2.02
COTL1-204ENST00000564662 POLKQ9UBT6 870 aa27.69■■■□□ 2.02
COTL1-204ENST00000564662 SMARCC1Q92922 1105 aaPredicted RBP27.67■■■□□ 2.02
COTL1-204ENST00000564662 UTRNP46939 3433 aa27.66■■■□□ 2.02
COTL1-204ENST00000564662 HSPA5P11021 654 aaKnown RBP27.66■■■□□ 2.02
COTL1-204ENST00000564662 EIF4G2P78344 907 aaKnown RBP eCLIP27.66■■■□□ 2.02
COTL1-204ENST00000564662 PIGBQ92521 554 aa27.65■■■□□ 2.02
COTL1-204ENST00000564662 EIF4A2Q14240 407 aaKnown RBP27.64■■■□□ 2.02
COTL1-204ENST00000564662 NKX1-1Q15270 411 aaPredicted RBP27.64■■■□□ 2.02
COTL1-204ENST00000564662 AK7Q96M32 723 aa27.64■■■□□ 2.02
COTL1-204ENST00000564662 HMGB2P26583 209 aaKnown RBP27.61■■■□□ 2.01
COTL1-204ENST00000564662 FLAD1Q8NFF5 587 aa27.61■■■□□ 2.01
COTL1-204ENST00000564662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.61■■■□□ 2.01
COTL1-204ENST00000564662 TMOD3Q9NYL9 352 aa27.61■■■□□ 2.01
COTL1-204ENST00000564662 PHKG2P15735 406 aa27.6■■■□□ 2.01
COTL1-204ENST00000564662 PHF14O94880 888 aa27.59■■■□□ 2.01
COTL1-204ENST00000564662 IFNL2Q8IZJ0 200 aa27.59■■■□□ 2.01
COTL1-204ENST00000564662 PANK3Q9H999 370 aa27.59■■■□□ 2.01
COTL1-204ENST00000564662 AMIGO3Q86WK7 504 aa27.58■■■□□ 2.01
COTL1-204ENST00000564662 LOC102724428A0A0B4J2F2 783 aa27.57■■■□□ 2
COTL1-204ENST00000564662 SIK1P57059 783 aa27.57■■■□□ 2
COTL1-204ENST00000564662 CCER1Q8TC90 406 aaPredicted RBP27.57■■■□□ 2
COTL1-204ENST00000564662 IGSF1Q8N6C5 1336 aa27.57■■■□□ 2
COTL1-204ENST00000564662 SMIM5Q71RC9 77 aa27.56■■■□□ 2
COTL1-204ENST00000564662 ASAP1Q9ULH1 1129 aa27.56■■■□□ 2
COTL1-204ENST00000564662 PLEKHG2Q9H7P9 1386 aa27.56■■■□□ 2
COTL1-204ENST00000564662 YBX3P16989 372 aaKnown RBP eCLIP27.55■■■□□ 22e-9■■□□□ 13.1
COTL1-204ENST00000564662 LINC00116Q8NCU8 138 aa27.55■■■□□ 2
COTL1-204ENST00000564662 COL5A3P25940 1745 aaPredicted RBP27.55■■■□□ 2
COTL1-204ENST00000564662 ZNF831Q5JPB2 1677 aa27.54■■■□□ 2
COTL1-204ENST00000564662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.53■■■□□ 2
COTL1-204ENST00000564662 SSFA2P28290 1259 aa27.51■■□□□ 1.99
COTL1-204ENST00000564662 ITPK1Q13572 414 aa27.51■■□□□ 1.99
COTL1-204ENST00000564662 GOLGB1Q14789 3259 aaKnown RBP27.51■■□□□ 1.99
COTL1-204ENST00000564662 GNPATO15228 680 aa27.5■■□□□ 1.99
COTL1-204ENST00000564662 ATP6V1AP38606 617 aa27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms